RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 KDM8Q8N371 416 aa7.4□□□□□ -1.22
SSBP3-212ENST00000528930 PCYOX1LQ8NBM8 494 aa7.4□□□□□ -1.22
SSBP3-212ENST00000528930 LILRB1Q8NHL6 650 aaPredicted RBP7.4□□□□□ -1.22
SSBP3-212ENST00000528930 SLC25A36Q96CQ1 311 aa7.4□□□□□ -1.22
SSBP3-212ENST00000528930 SLC7A6OSQ96CW6 309 aaPredicted RBP7.4□□□□□ -1.22
SSBP3-212ENST00000528930 RCN3Q96D15 328 aa7.4□□□□□ -1.22
SSBP3-212ENST00000528930 SLC47A1Q96FL8 570 aa7.4□□□□□ -1.22
SSBP3-212ENST00000528930 MUS81Q96NY9 551 aa7.4□□□□□ -1.22
SSBP3-212ENST00000528930 LRRC37BQ96QE4 947 aa7.4□□□□□ -1.22
SSBP3-212ENST00000528930 TNFRSF13CQ96RJ3 184 aa7.4□□□□□ -1.22
SSBP3-212ENST00000528930 MCHR1Q99705 422 aa7.4□□□□□ -1.22
SSBP3-212ENST00000528930 ECSITQ9BQ95 431 aa7.4□□□□□ -1.22
SSBP3-212ENST00000528930 SLCO5A1Q9H2Y9 848 aa7.4□□□□□ -1.22
SSBP3-212ENST00000528930 TMEM27Q9HBJ8 222 aa7.4□□□□□ -1.22
SSBP3-212ENST00000528930 PARPBPQ9NWS1 579 aa7.4□□□□□ -1.22
SSBP3-212ENST00000528930 ASB6Q9NWX5 421 aa7.4□□□□□ -1.22
SSBP3-212ENST00000528930 NPAP1Q9NZP6 1156 aa7.4□□□□□ -1.22
SSBP3-212ENST00000528930 B3GAT1Q9P2W7 334 aa7.4□□□□□ -1.22
SSBP3-212ENST00000528930 SEC14L4Q9UDX3 406 aa7.4□□□□□ -1.22
SSBP3-212ENST00000528930 SLC13A4Q9UKG4 626 aa7.4□□□□□ -1.22
SSBP3-212ENST00000528930 TRAV36DV7A0A075B6V5 113 aa7.39□□□□□ -1.23
SSBP3-212ENST00000528930 DPRXA6NFQ7 191 aa7.39□□□□□ -1.23
SSBP3-212ENST00000528930 OR5H1A6NKK0 313 aa7.39□□□□□ -1.23
SSBP3-212ENST00000528930 MS4A18H0YCH9 400 aa7.39□□□□□ -1.23
SSBP3-212ENST00000528930 OR2T1O43869 369 aa7.39□□□□□ -1.23
SSBP3-212ENST00000528930 RAD51DO75771 328 aa7.39□□□□□ -1.23
SSBP3-212ENST00000528930 BGLAPP02818 100 aa7.39□□□□□ -1.23
SSBP3-212ENST00000528930 GGT1P19440 569 aa7.39□□□□□ -1.23
SSBP3-212ENST00000528930 GRPRP30550 384 aa7.39□□□□□ -1.23
SSBP3-212ENST00000528930 SELENOPP49908 381 aa7.39□□□□□ -1.23
SSBP3-212ENST00000528930 PPA1Q15181 289 aa7.39□□□□□ -1.23
SSBP3-212ENST00000528930 MSMPQ1L6U9 139 aa7.39□□□□□ -1.23
SSBP3-212ENST00000528930 MS4A18Q3C1V0 323 aa7.39□□□□□ -1.23
SSBP3-212ENST00000528930 ENTPD8Q5MY95 495 aa7.39□□□□□ -1.23
SSBP3-212ENST00000528930 ALKBH2Q6NS38 261 aa7.39□□□□□ -1.23
SSBP3-212ENST00000528930 C8orf82Q6P1X6 216 aaPredicted RBP7.39□□□□□ -1.23
SSBP3-212ENST00000528930 ERICH5Q6P6B1 374 aa7.39□□□□□ -1.23
SSBP3-212ENST00000528930 ZNF613Q6PF04 617 aa7.39□□□□□ -1.23
SSBP3-212ENST00000528930 NHLRC1Q6VVB1 395 aa7.39□□□□□ -1.23
SSBP3-212ENST00000528930 WDR88Q6ZMY6 472 aa7.39□□□□□ -1.23
SSBP3-212ENST00000528930 LINGO2Q7L985 606 aa7.39□□□□□ -1.23
SSBP3-212ENST00000528930 AAED1Q7RTV5 226 aa7.39□□□□□ -1.23
SSBP3-212ENST00000528930 GPAT4Q86UL3 456 aa7.39□□□□□ -1.23
SSBP3-212ENST00000528930 RANBP3LQ86VV4 465 aaPredicted RBP7.39□□□□□ -1.23
SSBP3-212ENST00000528930 P2RY8Q86VZ1 359 aa7.39□□□□□ -1.23
SSBP3-212ENST00000528930 SLC15A3Q8IY34 581 aa7.39□□□□□ -1.23
SSBP3-212ENST00000528930 OR6S1Q8NH40 331 aa7.39□□□□□ -1.23
SSBP3-212ENST00000528930 SLC41A3Q96GZ6 507 aa7.39□□□□□ -1.23
SSBP3-212ENST00000528930 PCDHAC1Q9H158 963 aa7.39□□□□□ -1.23
SSBP3-212ENST00000528930 MYLK2Q9H1R3 596 aa7.39□□□□□ -1.23
SSBP3-212ENST00000528930 GID8Q9NWU2 228 aa7.39□□□□□ -1.23
SSBP3-212ENST00000528930 CMTM6Q9NX76 183 aa7.39□□□□□ -1.23
SSBP3-212ENST00000528930 TAS2R16Q9NYV7 291 aa7.39□□□□□ -1.23
SSBP3-212ENST00000528930 RASD1Q9Y272 281 aa7.39□□□□□ -1.23
SSBP3-212ENST00000528930 SLC25A15Q9Y619 301 aa7.39□□□□□ -1.23
SSBP3-212ENST00000528930 LOC102725191A0A1B0GVB3 256 aa7.38□□□□□ -1.23
SSBP3-212ENST00000528930 CIB4A0PJX0 185 aa7.38□□□□□ -1.23
SSBP3-212ENST00000528930 CPSF4LA6NMK7 179 aaKnown RBP7.38□□□□□ -1.23
SSBP3-212ENST00000528930 FAM220BPB1ANY3 271 aa7.38□□□□□ -1.23
SSBP3-212ENST00000528930 LRRN3E7EW58 273 aa7.38□□□□□ -1.23
SSBP3-212ENST00000528930 OVOL3O00110 214 aa7.38□□□□□ -1.23
SSBP3-212ENST00000528930 AIM2O14862 343 aa7.38□□□□□ -1.23
SSBP3-212ENST00000528930 CHP2O43745 196 aa7.38□□□□□ -1.23
SSBP3-212ENST00000528930 UPK3AO75631 287 aa7.38□□□□□ -1.23
SSBP3-212ENST00000528930 ZNF432O94892 652 aa7.38□□□□□ -1.23
SSBP3-212ENST00000528930 HPRP00739 348 aa7.38□□□□□ -1.23
SSBP3-212ENST00000528930 T-ENOLP0DO92 83 aa7.38□□□□□ -1.23
SSBP3-212ENST00000528930 PTNP21246 168 aa7.38□□□□□ -1.23
SSBP3-212ENST00000528930 CBLP22681 906 aa7.38□□□□□ -1.23
SSBP3-212ENST00000528930 MPGP29372 298 aa7.38□□□□□ -1.23
SSBP3-212ENST00000528930 BSPH1Q075Z2 132 aa7.38□□□□□ -1.23
SSBP3-212ENST00000528930 LGALS3BPQ08380 585 aa7.38□□□□□ -1.23
SSBP3-212ENST00000528930 LOXL1Q08397 574 aaPredicted RBP7.38□□□□□ -1.23
SSBP3-212ENST00000528930 STK11Q15831 433 aa7.38□□□□□ -1.23
SSBP3-212ENST00000528930 LCE4AQ5TA78 99 aa7.38□□□□□ -1.23
SSBP3-212ENST00000528930 ADAM5Q6NVV9 412 aa7.38□□□□□ -1.23
SSBP3-212ENST00000528930 H1FNTQ75WM6 255 aaPredicted RBP7.38□□□□□ -1.23
SSBP3-212ENST00000528930 WDR31Q8NA23 367 aa7.38□□□□□ -1.23
SSBP3-212ENST00000528930 POMGNT2Q8NAT1 580 aa7.38□□□□□ -1.23
SSBP3-212ENST00000528930 ADPRHL1Q8NDY3 354 aa7.38□□□□□ -1.23
SSBP3-212ENST00000528930 VANGL1Q8TAA9 524 aaPredicted RBP7.38□□□□□ -1.23
SSBP3-212ENST00000528930 SLC26A7Q8TE54 656 aa7.38□□□□□ -1.23
SSBP3-212ENST00000528930 ADAMTS16Q8TE57 1224 aa7.38□□□□□ -1.23
SSBP3-212ENST00000528930 RASSF5Q8WWW0 418 aa7.38□□□□□ -1.23
SSBP3-212ENST00000528930 NEUROG1Q92886 237 aa7.38□□□□□ -1.23
SSBP3-212ENST00000528930 BOD1Q96IK1 185 aa7.38□□□□□ -1.23
SSBP3-212ENST00000528930 OXGR1Q96P68 337 aa7.38□□□□□ -1.23
SSBP3-212ENST00000528930 MOGAT1Q96PD6 335 aa7.38□□□□□ -1.23
SSBP3-212ENST00000528930 PRSS27Q9BQR3 290 aa7.38□□□□□ -1.23
SSBP3-212ENST00000528930 TMEM43Q9BTV4 400 aa7.38□□□□□ -1.23
SSBP3-212ENST00000528930 ZNF426Q9BUY5 554 aa7.38□□□□□ -1.23
SSBP3-212ENST00000528930 ZNF747Q9BV97 191 aa7.38□□□□□ -1.23
SSBP3-212ENST00000528930 NGBQ9NPG2 151 aa7.38□□□□□ -1.23
SSBP3-212ENST00000528930 UPB1Q9UBR1 384 aa7.38□□□□□ -1.23
SSBP3-212ENST00000528930 NKX1-2Q9UD57 310 aaPredicted RBP7.38□□□□□ -1.23
SSBP3-212ENST00000528930 B3GALT5Q9Y2C3 310 aa7.38□□□□□ -1.23
SSBP3-212ENST00000528930 HYDINQ4G0P3 5121 aa7.38□□□□□ -1.23
SSBP3-212ENST00000528930 A0A0A6YYJ9 748 aa7.37□□□□□ -1.23
SSBP3-212ENST00000528930 A0A1W2PR80 420 aa7.37□□□□□ -1.23
SSBP3-212ENST00000528930 ELOVL7A1L3X0 281 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms