RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 IPCEF1Q8WWN9 437 aaPredicted RBP7.04□□□□□ -1.28
SSBP3-211ENST00000528787 ASB10Q8WXI3 467 aa7.04□□□□□ -1.28
SSBP3-211ENST00000528787 SAMD8Q96LT4 415 aa7.04□□□□□ -1.28
SSBP3-211ENST00000528787 NIPSNAP1Q9BPW8 284 aa7.04□□□□□ -1.28
SSBP3-211ENST00000528787 ULBP2Q9BZM5 246 aa7.04□□□□□ -1.28
SSBP3-211ENST00000528787 CMC2Q9NRP2 79 aa7.04□□□□□ -1.28
SSBP3-211ENST00000528787 TAS2R16Q9NYV7 291 aa7.04□□□□□ -1.28
SSBP3-211ENST00000528787 GLTPQ9NZD2 209 aa7.04□□□□□ -1.28
SSBP3-211ENST00000528787 B3GAT1Q9P2W7 334 aa7.04□□□□□ -1.28
SSBP3-211ENST00000528787 MALT1Q9UDY8 824 aa7.04□□□□□ -1.28
SSBP3-211ENST00000528787 NDRG3Q9UGV2 375 aa7.04□□□□□ -1.28
SSBP3-211ENST00000528787 KCNG2Q9UJ96 466 aa7.04□□□□□ -1.28
SSBP3-211ENST00000528787 GPR52Q9Y2T5 361 aa7.04□□□□□ -1.28
SSBP3-211ENST00000528787 A0A0G2JNJ9 132 aa7.03□□□□□ -1.28
SSBP3-211ENST00000528787 CIB4A0PJX0 185 aa7.03□□□□□ -1.28
SSBP3-211ENST00000528787 PRSS37A4D1T9 235 aa7.03□□□□□ -1.28
SSBP3-211ENST00000528787 SLC22A31A6NKX4 558 aa7.03□□□□□ -1.28
SSBP3-211ENST00000528787 KDM4EB2RXH2 506 aaPredicted RBP7.03□□□□□ -1.28
SSBP3-211ENST00000528787 PRR23D1E9PI22 279 aaPredicted RBP7.03□□□□□ -1.28
SSBP3-211ENST00000528787 SLC16A6O15403 523 aa7.03□□□□□ -1.28
SSBP3-211ENST00000528787 PRODHO43272 600 aa7.03□□□□□ -1.28
SSBP3-211ENST00000528787 ARHGEF9O43307 516 aa7.03□□□□□ -1.28
SSBP3-211ENST00000528787 KHDRBS3O75525 346 aaKnown RBP7.03□□□□□ -1.28
SSBP3-211ENST00000528787 SERPINI2O75830 405 aa7.03□□□□□ -1.28
SSBP3-211ENST00000528787 WNT11O96014 354 aa7.03□□□□□ -1.28
SSBP3-211ENST00000528787 PTHP01270 115 aa7.03□□□□□ -1.28
SSBP3-211ENST00000528787 PRB1P04280 392 aa7.03□□□□□ -1.28
SSBP3-211ENST00000528787 PRR23D2P0DMB1 279 aaPredicted RBP7.03□□□□□ -1.28
SSBP3-211ENST00000528787 BMP5P22003 454 aa7.03□□□□□ -1.28
SSBP3-211ENST00000528787 IL32P24001 234 aa7.03□□□□□ -1.28
SSBP3-211ENST00000528787 KIR2DL2P43627 348 aaPredicted RBP7.03□□□□□ -1.28
SSBP3-211ENST00000528787 PTDSS1P48651 473 aaKnown RBP7.03□□□□□ -1.28
SSBP3-211ENST00000528787 SLC25A1P53007 311 aa7.03□□□□□ -1.28
SSBP3-211ENST00000528787 PCBD1P61457 104 aa7.03□□□□□ -1.28
SSBP3-211ENST00000528787 SIRPAP78324 504 aa7.03□□□□□ -1.28
SSBP3-211ENST00000528787 CDK5Q00535 292 aa7.03□□□□□ -1.28
SSBP3-211ENST00000528787 POU4F2Q12837 409 aa7.03□□□□□ -1.28
SSBP3-211ENST00000528787 PPP1R8Q12972 351 aaKnown RBP7.03□□□□□ -1.28
SSBP3-211ENST00000528787 TOP3AQ13472 1001 aaPredicted RBP7.03□□□□□ -1.28
SSBP3-211ENST00000528787 MED21Q13503 144 aa7.03□□□□□ -1.28
SSBP3-211ENST00000528787 IGFBP7Q16270 282 aa7.03□□□□□ -1.28
SSBP3-211ENST00000528787 SNAPC1Q16533 368 aa7.03□□□□□ -1.28
SSBP3-211ENST00000528787 SLC35D3Q5M8T2 416 aa7.03□□□□□ -1.28
SSBP3-211ENST00000528787 TFAP2EQ6VUC0 442 aa7.03□□□□□ -1.28
SSBP3-211ENST00000528787 TMEM179BQ7Z7N9 219 aa7.03□□□□□ -1.28
SSBP3-211ENST00000528787 C20orf196Q8IYI0 205 aa7.03□□□□□ -1.28
SSBP3-211ENST00000528787 GCNT2Q8N0V5 402 aa7.03□□□□□ -1.28
SSBP3-211ENST00000528787 MOSPD2Q8NHP6 518 aa7.03□□□□□ -1.28
SSBP3-211ENST00000528787 KISS1RQ969F8 398 aaPredicted RBP7.03□□□□□ -1.28
SSBP3-211ENST00000528787 MUCL1Q96DR8 90 aa7.03□□□□□ -1.28
SSBP3-211ENST00000528787 MRPL48Q96GC5 212 aaKnown RBP7.03□□□□□ -1.28
SSBP3-211ENST00000528787 CCDC120Q96HB5 630 aa7.03□□□□□ -1.28
SSBP3-211ENST00000528787 BOD1Q96IK1 185 aa7.03□□□□□ -1.28
SSBP3-211ENST00000528787 HRASLS5Q96KN8 279 aa7.03□□□□□ -1.28
SSBP3-211ENST00000528787 OR2M2Q96R28 347 aa7.03□□□□□ -1.28
SSBP3-211ENST00000528787 MNTQ99583 582 aa7.03□□□□□ -1.28
SSBP3-211ENST00000528787 C1orf198Q9H425 327 aa7.03□□□□□ -1.28
SSBP3-211ENST00000528787 RIBC2Q9H4K1 309 aa7.03□□□□□ -1.28
SSBP3-211ENST00000528787 EGLN3Q9H6Z9 239 aa7.03□□□□□ -1.28
SSBP3-211ENST00000528787 VNN3Q9NY84 501 aa7.03□□□□□ -1.28
SSBP3-211ENST00000528787 VSX1Q9NZR4 365 aaPredicted RBP7.03□□□□□ -1.28
SSBP3-211ENST00000528787 Q9UFV3 132 aa7.03□□□□□ -1.28
SSBP3-211ENST00000528787 ZNF346Q9UL40 294 aaKnown RBP7.03□□□□□ -1.28
SSBP3-211ENST00000528787 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.03□□□□□ -1.28
SSBP3-211ENST00000528787 RNF6Q9Y252 685 aa7.03□□□□□ -1.28
SSBP3-211ENST00000528787 AMDHD2Q9Y303 409 aa7.03□□□□□ -1.28
SSBP3-211ENST00000528787 PCDHGB1Q9Y5G3 927 aa7.03□□□□□ -1.28
SSBP3-211ENST00000528787 GMPPBQ9Y5P6 360 aa7.03□□□□□ -1.28
SSBP3-211ENST00000528787 IER3IP1Q9Y5U9 82 aa7.03□□□□□ -1.28
SSBP3-211ENST00000528787 KLF2Q9Y5W3 355 aaPredicted RBP7.03□□□□□ -1.28
SSBP3-211ENST00000528787 FKBP7Q9Y680 259 aa7.03□□□□□ -1.28
SSBP3-211ENST00000528787 BSNQ9UPA5 3926 aa7.03□□□□□ -1.28
SSBP3-211ENST00000528787 KALRNO60229 2985 aa7.03□□□□□ -1.28
SSBP3-211ENST00000528787 DIDO1Q9BTC0 2240 aaKnown RBP7.03□□□□□ -1.28
SSBP3-211ENST00000528787 NCOA6Q14686 2063 aaPredicted RBP7.02□□□□□ -1.29
SSBP3-211ENST00000528787 TEX13CA0A0J9YWL9 993 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 LOC100130705A0A1B0GUX0 176 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 ZAR1LA6NP61 321 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 A8MXE2 369 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 ZNF99A8MXY4 864 aaPredicted RBP7.02□□□□□ -1.29
SSBP3-211ENST00000528787 LRRN3E7EW58 273 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 C16orf97H3BN30 126 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 PDLIM1O00151 329 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 BHLHE40O14503 412 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 SOCS2O14508 198 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 TRMUO75648 421 aaKnown RBP7.02□□□□□ -1.29
SSBP3-211ENST00000528787 TNFSF13O75888 250 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 ZNF432O94892 652 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 SOX14O95416 240 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 PPP1R3DO95685 299 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 PGA4P0DJD7 388 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 PGA3P0DJD8 388 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 OR8G3PP0DMU2 310 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 PSMB1P20618 241 aaKnown RBP7.02□□□□□ -1.29
SSBP3-211ENST00000528787 PTNP21246 168 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 PEX2P28328 305 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 ZNF133P52736 654 aaPredicted RBP7.02□□□□□ -1.29
SSBP3-211ENST00000528787 UBE2NP61088 152 aaKnown RBP7.02□□□□□ -1.29
SSBP3-211ENST00000528787 ERVK-25P63136 954 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 TEKQ02763 1124 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms