RNA–Protein interactions for RNA: ENST00000528142.5

VPS28-209, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS28, Length 1,821 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-209ENST00000528142 GPANK1O95872 356 aa18.58■□□□□ 0.57
VPS28-209ENST00000528142 FKBP2P26885 142 aaKnown RBP18.58■□□□□ 0.57
VPS28-209ENST00000528142 SHC1P29353 583 aa18.58■□□□□ 0.57
VPS28-209ENST00000528142 TNFSF8P32971 234 aa18.58■□□□□ 0.57
VPS28-209ENST00000528142 SELENBP1Q13228 472 aa18.58■□□□□ 0.57
VPS28-209ENST00000528142 Q6ZNX1 250 aa18.58■□□□□ 0.57
VPS28-209ENST00000528142 MDGA2Q7Z553 956 aa18.58■□□□□ 0.57
VPS28-209ENST00000528142 PXKQ7Z7A4 578 aa18.58■□□□□ 0.57
VPS28-209ENST00000528142 SNX29P2Q8IUI4 249 aa18.58■□□□□ 0.57
VPS28-209ENST00000528142 GTPBP8Q8N3Z3 284 aaPredicted RBP18.58■□□□□ 0.57
VPS28-209ENST00000528142 MS4A15Q8N5U1 240 aa18.58■□□□□ 0.57
VPS28-209ENST00000528142 RPS4Y2Q8TD47 263 aa18.58■□□□□ 0.57
VPS28-209ENST00000528142 SLC25A43Q8WUT9 341 aaPredicted RBP18.58■□□□□ 0.57
VPS28-209ENST00000528142 ASB10Q8WXI3 467 aa18.58■□□□□ 0.57
VPS28-209ENST00000528142 SMIM19Q96E16 107 aa18.58■□□□□ 0.57
VPS28-209ENST00000528142 ADAD1Q96M93 576 aaKnown RBP18.58■□□□□ 0.57
VPS28-209ENST00000528142 UBL7Q96S82 380 aaPredicted RBP18.58■□□□□ 0.57
VPS28-209ENST00000528142 PPIL3Q9H2H8 161 aaKnown RBP18.58■□□□□ 0.57
VPS28-209ENST00000528142 TMEM185BQ9H7F4 350 aa18.58■□□□□ 0.57
VPS28-209ENST00000528142 SPAARA0A1B0GVQ0 90 aa18.58■□□□□ 0.56
VPS28-209ENST00000528142 A0A1W2PNV4 684 aa18.58■□□□□ 0.56
VPS28-209ENST00000528142 A6NIZ1 184 aa18.58■□□□□ 0.56
VPS28-209ENST00000528142 SLC16A7O60669 478 aa18.58■□□□□ 0.56
VPS28-209ENST00000528142 TNFSF15O95150 251 aa18.58■□□□□ 0.56
VPS28-209ENST00000528142 IFNGR1P15260 489 aa18.58■□□□□ 0.56
VPS28-209ENST00000528142 CTLA4P16410 223 aa18.58■□□□□ 0.56
VPS28-209ENST00000528142 ALOX5APP20292 161 aa18.58■□□□□ 0.56
VPS28-209ENST00000528142 P2RY4P51582 365 aa18.58■□□□□ 0.56
VPS28-209ENST00000528142 RAP1BP61224 184 aa18.58■□□□□ 0.56
VPS28-209ENST00000528142 RAP1AP62834 184 aa18.58■□□□□ 0.56
VPS28-209ENST00000528142 HSF1Q00613 529 aa18.58■□□□□ 0.56
VPS28-209ENST00000528142 ACER2Q5QJU3 275 aa18.58■□□□□ 0.56
VPS28-209ENST00000528142 KCTD20Q7Z5Y7 419 aa18.58■□□□□ 0.56
VPS28-209ENST00000528142 WDFY1Q8IWB7 410 aa18.58■□□□□ 0.56
VPS28-209ENST00000528142 ADPRHL1Q8NDY3 354 aa18.58■□□□□ 0.56
VPS28-209ENST00000528142 PSMF1Q92530 271 aa18.58■□□□□ 0.56
VPS28-209ENST00000528142 TMEM41AQ96HV5 264 aa18.58■□□□□ 0.56
VPS28-209ENST00000528142 KLHL15Q96M94 604 aa18.58■□□□□ 0.56
VPS28-209ENST00000528142 WDFY2Q96P53 400 aa18.58■□□□□ 0.56
VPS28-209ENST00000528142 GNRHR2Q96P88 292 aa18.58■□□□□ 0.56
VPS28-209ENST00000528142 INTS14Q96SY0 518 aa18.58■□□□□ 0.56
VPS28-209ENST00000528142 B3GAT1Q9P2W7 334 aa18.58■□□□□ 0.56
VPS28-209ENST00000528142 LOC101059948A0A1B0GTJ6 334 aa18.57■□□□□ 0.56
VPS28-209ENST00000528142 SMIM30A4D0T7 59 aa18.57■□□□□ 0.56
VPS28-209ENST00000528142 SLC35F4A4IF30 521 aa18.57■□□□□ 0.56
VPS28-209ENST00000528142 G3V3Y1 287 aa18.57■□□□□ 0.56
VPS28-209ENST00000528142 RAD1O60671 282 aa18.57■□□□□ 0.56
VPS28-209ENST00000528142 SNX4O95219 450 aa18.57■□□□□ 0.56
VPS28-209ENST00000528142 OPN1LWP04000 364 aa18.57■□□□□ 0.56
VPS28-209ENST00000528142 PSKH1P11801 424 aa18.57■□□□□ 0.56
VPS28-209ENST00000528142 DPP4P27487 766 aa18.57■□□□□ 0.56
VPS28-209ENST00000528142 MTNR1BP49286 362 aa18.57■□□□□ 0.56
VPS28-209ENST00000528142 CENPAP49450 140 aa18.57■□□□□ 0.56
VPS28-209ENST00000528142 DAP3P51398 398 aaKnown RBP18.57■□□□□ 0.56
VPS28-209ENST00000528142 CAV3P56539 151 aa18.57■□□□□ 0.56
VPS28-209ENST00000528142 DSCR4P56555 118 aaPredicted RBP18.57■□□□□ 0.56
VPS28-209ENST00000528142 TIGD3Q6B0B8 471 aa18.57■□□□□ 0.56
VPS28-209ENST00000528142 SLC35D2Q76EJ3 337 aa18.57■□□□□ 0.56
VPS28-209ENST00000528142 OR1J4Q8NGS1 313 aa18.57■□□□□ 0.56
VPS28-209ENST00000528142 C5orf34Q96MH7 638 aa18.57■□□□□ 0.56
VPS28-209ENST00000528142 FAM117AQ9C073 453 aa18.57■□□□□ 0.56
VPS28-209ENST00000528142 MRM2Q9UI43 246 aaKnown RBP18.57■□□□□ 0.56
VPS28-209ENST00000528142 GVINP1Q7Z2Y8 2422 aa18.56■□□□□ 0.56
VPS28-209ENST00000528142 NPIPA5E9PKD4 350 aa18.56■□□□□ 0.56
VPS28-209ENST00000528142 ZIC3O60481 467 aa18.56■□□□□ 0.56
VPS28-209ENST00000528142 ABHD16AO95870 558 aa18.56■□□□□ 0.56
VPS28-209ENST00000528142 PSMB10P40306 273 aa18.56■□□□□ 0.56
VPS28-209ENST00000528142 GDI2P50395 445 aaKnown RBP18.56■□□□□ 0.56
VPS28-209ENST00000528142 BLVRAP53004 296 aa18.56■□□□□ 0.56
VPS28-209ENST00000528142 ETFDHQ16134 617 aa18.56■□□□□ 0.56
VPS28-209ENST00000528142 PLEKHG7Q6ZR37 379 aa18.56■□□□□ 0.56
VPS28-209ENST00000528142 CEACAM19Q7Z692 300 aa18.56■□□□□ 0.56
VPS28-209ENST00000528142 OR6N2Q8NGY6 317 aa18.56■□□□□ 0.56
VPS28-209ENST00000528142 CHPT1Q8WUD6 406 aa18.56■□□□□ 0.56
VPS28-209ENST00000528142 TXNDC15Q96J42 360 aa18.56■□□□□ 0.56
VPS28-209ENST00000528142 OR5B2Q96R09 309 aa18.56■□□□□ 0.56
VPS28-209ENST00000528142 B3GNT4Q9C0J1 378 aa18.56■□□□□ 0.56
VPS28-209ENST00000528142 TSPAN10Q9H1Z9 355 aaPredicted RBP18.56■□□□□ 0.56
VPS28-209ENST00000528142 NPIPA1Q9UND3 350 aa18.56■□□□□ 0.56
VPS28-209ENST00000528142 HDGFL3Q9Y3E1 203 aa18.56■□□□□ 0.56
VPS28-209ENST00000528142 A0A1W2PNR3 127 aa18.56■□□□□ 0.56
VPS28-209ENST00000528142 PSMD9O00233 223 aa18.56■□□□□ 0.56
VPS28-209ENST00000528142 TM4SF5O14894 197 aa18.56■□□□□ 0.56
VPS28-209ENST00000528142 EDNRAP25101 427 aa18.56■□□□□ 0.56
VPS28-209ENST00000528142 RPS11P62280 158 aaKnown RBP eCLIP18.56■□□□□ 0.56
VPS28-209ENST00000528142 POU3F1Q03052 451 aaPredicted RBP18.56■□□□□ 0.56
VPS28-209ENST00000528142 ZNF239Q16600 458 aaKnown RBP18.56■□□□□ 0.56
VPS28-209ENST00000528142 RGS21Q2M5E4 152 aa18.56■□□□□ 0.56
VPS28-209ENST00000528142 TMEM176BQ3YBM2 270 aaPredicted RBP18.56■□□□□ 0.56
VPS28-209ENST00000528142 ACSM3Q53FZ2 586 aa18.56■□□□□ 0.56
VPS28-209ENST00000528142 SPANXN2Q5MJ10 180 aa18.56■□□□□ 0.56
VPS28-209ENST00000528142 FAM205BPQ63HN1 556 aa18.56■□□□□ 0.56
VPS28-209ENST00000528142 DPY19L4Q7Z388 723 aa18.56■□□□□ 0.56
VPS28-209ENST00000528142 TEX19Q8NA77 164 aa18.56■□□□□ 0.56
VPS28-209ENST00000528142 ADAMTS17Q8TE56 1095 aa18.56■□□□□ 0.56
VPS28-209ENST00000528142 KCNK17Q96T54 332 aa18.56■□□□□ 0.56
VPS28-209ENST00000528142 SLC30A2Q9BRI3 323 aa18.56■□□□□ 0.56
VPS28-209ENST00000528142 RNF32Q9H0A6 362 aa18.56■□□□□ 0.56
VPS28-209ENST00000528142 MRPL22Q9NWU5 206 aaKnown RBP18.56■□□□□ 0.56
VPS28-209ENST00000528142 ANKRD10Q9NXR5 420 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms