RNA–Protein interactions for RNA: ENST00000527954.1

EXOSC4-203, Transcript of exosome component 4, humanhuman

TSL 2

Gene EXOSC4, Length 1,065 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-203ENST00000527954 TMEM160Q9NX00 188 aa13.1□□□□□ -0.31
EXOSC4-203ENST00000527954 GLTPQ9NZD2 209 aa13.1□□□□□ -0.31
EXOSC4-203ENST00000527954 FBXO9Q9UK97 447 aaPredicted RBP13.1□□□□□ -0.31
EXOSC4-203ENST00000527954 CMAHPQ9Y471 501 aa13.1□□□□□ -0.31
EXOSC4-203ENST00000527954 FBN1P35555 2871 aaKnown RBP13.09□□□□□ -0.31
EXOSC4-203ENST00000527954 LOC100289279A0A1B0GTE1 492 aa13.09□□□□□ -0.31
EXOSC4-203ENST00000527954 RNF212BA8MTL3 300 aa13.09□□□□□ -0.31
EXOSC4-203ENST00000527954 SASH3O75995 380 aa13.09□□□□□ -0.31
EXOSC4-203ENST00000527954 RAB36O95755 333 aa13.09□□□□□ -0.31
EXOSC4-203ENST00000527954 HIST1H2ABP04908 130 aa13.09□□□□□ -0.31
EXOSC4-203ENST00000527954 ERCC1P07992 297 aaPredicted RBP13.09□□□□□ -0.31
EXOSC4-203ENST00000527954 ADRA2AP08913 450 aa13.09□□□□□ -0.31
EXOSC4-203ENST00000527954 UMPSP11172 480 aa13.09□□□□□ -0.31
EXOSC4-203ENST00000527954 ZNF35P13682 527 aa13.09□□□□□ -0.31
EXOSC4-203ENST00000527954 DAOP14920 347 aa13.09□□□□□ -0.31
EXOSC4-203ENST00000527954 TNFRSF1BP20333 461 aa13.09□□□□□ -0.31
EXOSC4-203ENST00000527954 SF3A3Q12874 501 aaKnown RBP eCLIP13.09□□□□□ -0.314e-6■■■■□ 22.2
EXOSC4-203ENST00000527954 MSMPQ1L6U9 139 aa13.09□□□□□ -0.31
EXOSC4-203ENST00000527954 ARFGEF3Q5TH69 2177 aa13.09□□□□□ -0.31
EXOSC4-203ENST00000527954 LRFN4Q6PJG9 635 aa13.09□□□□□ -0.31
EXOSC4-203ENST00000527954 CCDC80Q76M96 950 aa13.09□□□□□ -0.31
EXOSC4-203ENST00000527954 HIST3H2AQ7L7L0 130 aa13.09□□□□□ -0.31
EXOSC4-203ENST00000527954 SKA3Q8IX90 412 aa13.09□□□□□ -0.31
EXOSC4-203ENST00000527954 FGFBP3Q8TAT2 258 aa13.09□□□□□ -0.31
EXOSC4-203ENST00000527954 NEU4Q8WWR8 484 aaPredicted RBP13.09□□□□□ -0.31
EXOSC4-203ENST00000527954 RASSF5Q8WWW0 418 aa13.09□□□□□ -0.31
EXOSC4-203ENST00000527954 HIST1H2ACQ93077 130 aa13.09□□□□□ -0.31
EXOSC4-203ENST00000527954 MSI2Q96DH6 328 aaKnown RBP13.09□□□□□ -0.31
EXOSC4-203ENST00000527954 MPP4Q96JB8 637 aa13.09□□□□□ -0.31
EXOSC4-203ENST00000527954 ZNF426Q9BUY5 554 aa13.09□□□□□ -0.31
EXOSC4-203ENST00000527954 MRPL37Q9BZE1 423 aaKnown RBP13.09□□□□□ -0.31
EXOSC4-203ENST00000527954 SHARPINQ9H0F6 387 aa13.09□□□□□ -0.31
EXOSC4-203ENST00000527954 PCDHAC1Q9H158 963 aa13.09□□□□□ -0.31
EXOSC4-203ENST00000527954 CHODLQ9H9P2 273 aa13.09□□□□□ -0.31
EXOSC4-203ENST00000527954 ZNF229Q9UJW7 825 aa13.09□□□□□ -0.31
EXOSC4-203ENST00000527954 SH3GLB1Q9Y371 365 aa13.09□□□□□ -0.31
EXOSC4-203ENST00000527954 UBL3O95164 117 aa13.08□□□□□ -0.32
EXOSC4-203ENST00000527954 ASAH2BP0C7U1 165 aa13.08□□□□□ -0.32
EXOSC4-203ENST00000527954 ZNF23P17027 643 aa13.08□□□□□ -0.32
EXOSC4-203ENST00000527954 IGFBP5P24593 272 aa13.08□□□□□ -0.32
EXOSC4-203ENST00000527954 RAB39AQ14964 217 aa13.08□□□□□ -0.32
EXOSC4-203ENST00000527954 MMEL1Q495T6 779 aa13.08□□□□□ -0.32
EXOSC4-203ENST00000527954 FAM166AQ6J272 317 aa13.08□□□□□ -0.32
EXOSC4-203ENST00000527954 PIWIL3Q7Z3Z3 882 aaKnown RBP13.08□□□□□ -0.32
EXOSC4-203ENST00000527954 CARM1Q86X55 608 aa13.08□□□□□ -0.32
EXOSC4-203ENST00000527954 CALHM3Q86XJ0 350 aa13.08□□□□□ -0.32
EXOSC4-203ENST00000527954 ZNF540Q8NDQ6 660 aa13.08□□□□□ -0.32
EXOSC4-203ENST00000527954 ZNF566Q969W8 418 aa13.08□□□□□ -0.32
EXOSC4-203ENST00000527954 MRPL24Q96A35 216 aaKnown RBP13.08□□□□□ -0.32
EXOSC4-203ENST00000527954 SLC25A44Q96H78 314 aaPredicted RBP13.08□□□□□ -0.32
EXOSC4-203ENST00000527954 SH3GL1Q99961 368 aa13.08□□□□□ -0.32
EXOSC4-203ENST00000527954 ECSITQ9BQ95 431 aa13.08□□□□□ -0.32
EXOSC4-203ENST00000527954 SLC19A3Q9BZV2 496 aa13.08□□□□□ -0.32
EXOSC4-203ENST00000527954 TPK1Q9H3S4 243 aa13.08□□□□□ -0.32
EXOSC4-203ENST00000527954 MEPEQ9NQ76 525 aaPredicted RBP13.08□□□□□ -0.32
EXOSC4-203ENST00000527954 LPAR3Q9UBY5 353 aa13.08□□□□□ -0.32
EXOSC4-203ENST00000527954 KCNS2Q9ULS6 477 aa13.08□□□□□ -0.32
EXOSC4-203ENST00000527954 SPEF1Q9Y4P9 236 aa13.08□□□□□ -0.32
EXOSC4-203ENST00000527954 LRP5LA4QPB2 252 aa13.07□□□□□ -0.32
EXOSC4-203ENST00000527954 LYNX1G3V0Z9 82 aa13.07□□□□□ -0.32
EXOSC4-203ENST00000527954 BLOC1S5-TXNDC5H3BN57 136 aa13.07□□□□□ -0.32
EXOSC4-203ENST00000527954 FXYD1O00168 92 aa13.07□□□□□ -0.32
EXOSC4-203ENST00000527954 SHOX2O60902 331 aaPredicted RBP13.07□□□□□ -0.32
EXOSC4-203ENST00000527954 LYNX1P0DP58 116 aa13.07□□□□□ -0.32
EXOSC4-203ENST00000527954 ARFIP2P53365 341 aa13.07□□□□□ -0.32
EXOSC4-203ENST00000527954 KLF10Q13118 480 aa13.07□□□□□ -0.32
EXOSC4-203ENST00000527954 GKAP1Q5VSY0 366 aaPredicted RBP13.07□□□□□ -0.32
EXOSC4-203ENST00000527954 REP15Q6BDI9 236 aa13.07□□□□□ -0.32
EXOSC4-203ENST00000527954 DEF8Q6ZN54 512 aa13.07□□□□□ -0.32
EXOSC4-203ENST00000527954 IL17RELQ6ZVW7 336 aa13.07□□□□□ -0.32
EXOSC4-203ENST00000527954 NANOGNBQ7Z5D8 188 aa13.07□□□□□ -0.32
EXOSC4-203ENST00000527954 LRP11Q86VZ4 500 aa13.07□□□□□ -0.32
EXOSC4-203ENST00000527954 NKAIN4Q8IVV8 208 aa13.07□□□□□ -0.32
EXOSC4-203ENST00000527954 SLC22A24Q8N4F4 322 aa13.07□□□□□ -0.32
EXOSC4-203ENST00000527954 UBASH3BQ8TF42 649 aa13.07□□□□□ -0.32
EXOSC4-203ENST00000527954 LRRC58Q96CX6 371 aa13.07□□□□□ -0.32
EXOSC4-203ENST00000527954 SH3GL3Q99963 347 aa13.07□□□□□ -0.32
EXOSC4-203ENST00000527954 SYT3Q9BQG1 590 aa13.07□□□□□ -0.32
EXOSC4-203ENST00000527954 SOX7Q9BT81 388 aa13.07□□□□□ -0.32
EXOSC4-203ENST00000527954 DENND2DQ9H6A0 471 aaPredicted RBP13.07□□□□□ -0.32
EXOSC4-203ENST00000527954 LOC100653049A0A140TA62 436 aa13.06□□□□□ -0.32
EXOSC4-203ENST00000527954 MRASO14807 208 aa13.06□□□□□ -0.32
EXOSC4-203ENST00000527954 DHHO43323 396 aa13.06□□□□□ -0.32
EXOSC4-203ENST00000527954 KRT34O76011 436 aa13.06□□□□□ -0.32
EXOSC4-203ENST00000527954 BCL10O95999 233 aa13.06□□□□□ -0.32
EXOSC4-203ENST00000527954 TGFAP01135 160 aa13.06□□□□□ -0.32
EXOSC4-203ENST00000527954 QDPRP09417 244 aa13.06□□□□□ -0.32
EXOSC4-203ENST00000527954 PGA4P0DJD7 388 aa13.06□□□□□ -0.32
EXOSC4-203ENST00000527954 PGA3P0DJD8 388 aa13.06□□□□□ -0.32
EXOSC4-203ENST00000527954 OR8G3PP0DMU2 310 aa13.06□□□□□ -0.32
EXOSC4-203ENST00000527954 TROVE2P10155 538 aaKnown RBP eCLIP13.06□□□□□ -0.32
EXOSC4-203ENST00000527954 FUT1P19526 365 aa13.06□□□□□ -0.32
EXOSC4-203ENST00000527954 GIFP27352 417 aa13.06□□□□□ -0.32
EXOSC4-203ENST00000527954 GLRXP35754 106 aa13.06□□□□□ -0.32
EXOSC4-203ENST00000527954 UGT2B15P54855 530 aa13.06□□□□□ -0.32
EXOSC4-203ENST00000527954 MYBPC1Q00872 1141 aa13.06□□□□□ -0.32
EXOSC4-203ENST00000527954 GALK2Q01415 458 aa13.06□□□□□ -0.32
EXOSC4-203ENST00000527954 CGB2Q6NT52 195 aa13.06□□□□□ -0.32
EXOSC4-203ENST00000527954 ZNF584Q8IVC4 421 aa13.06□□□□□ -0.32
EXOSC4-203ENST00000527954 PHC2Q8IXK0 858 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms