RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 OR5J2Q8NH18 312 aa12.32□□□□□ -0.44
CAPN1-212ENST00000527887 NANOS1Q8WY41 292 aaKnown RBP12.32□□□□□ -0.44
CAPN1-212ENST00000527887 CDRT15Q96T59 188 aa12.32□□□□□ -0.44
CAPN1-212ENST00000527887 RAB1BQ9H0U4 201 aa12.32□□□□□ -0.44
CAPN1-212ENST00000527887 PCDHAC1Q9H158 963 aa12.32□□□□□ -0.44
CAPN1-212ENST00000527887 CD300AQ9UGN4 299 aa12.32□□□□□ -0.44
CAPN1-212ENST00000527887 SLC7A8Q9UHI5 535 aa12.32□□□□□ -0.44
CAPN1-212ENST00000527887 CDC42EP3Q9UKI2 254 aa12.32□□□□□ -0.44
CAPN1-212ENST00000527887 FBXL3Q9UKT7 428 aa12.32□□□□□ -0.44
CAPN1-212ENST00000527887 POFUT2Q9Y2G5 429 aa12.32□□□□□ -0.44
CAPN1-212ENST00000527887 TRAPPC13A5PLN9 417 aa12.31□□□□□ -0.44
CAPN1-212ENST00000527887 VWC2LB2RUY7 222 aa12.31□□□□□ -0.44
CAPN1-212ENST00000527887 M0R3G1 203 aa12.31□□□□□ -0.44
CAPN1-212ENST00000527887 GPRIN2O60269 458 aa12.31□□□□□ -0.44
CAPN1-212ENST00000527887 HPRP00739 348 aa12.31□□□□□ -0.44
CAPN1-212ENST00000527887 HSD17B1P14061 328 aa12.31□□□□□ -0.44
CAPN1-212ENST00000527887 NPR2P20594 1047 aa12.31□□□□□ -0.44
CAPN1-212ENST00000527887 AHCYP23526 432 aa12.31□□□□□ -0.44
CAPN1-212ENST00000527887 CALCRP30988 508 aa12.31□□□□□ -0.44
CAPN1-212ENST00000527887 PCGF2P35227 344 aa12.31□□□□□ -0.44
CAPN1-212ENST00000527887 EVX1P49640 407 aa12.31□□□□□ -0.44
CAPN1-212ENST00000527887 GZMKP49863 264 aa12.31□□□□□ -0.44
CAPN1-212ENST00000527887 IDH3GP51553 393 aaPredicted RBP12.31□□□□□ -0.44
CAPN1-212ENST00000527887 MTPNP58546 118 aa12.31□□□□□ -0.44
CAPN1-212ENST00000527887 TUBA1BP68363 451 aa12.31□□□□□ -0.44
CAPN1-212ENST00000527887 TUBA4AP68366 448 aa12.31□□□□□ -0.44
CAPN1-212ENST00000527887 LSM11P83369 360 aaKnown RBP eCLIP12.31□□□□□ -0.44
CAPN1-212ENST00000527887 HGFACQ04756 655 aa12.31□□□□□ -0.44
CAPN1-212ENST00000527887 TRAP1Q12931 704 aaKnown RBP12.31□□□□□ -0.44
CAPN1-212ENST00000527887 ENTPD8Q5MY95 495 aa12.31□□□□□ -0.44
CAPN1-212ENST00000527887 CYB5R2Q6BCY4 276 aa12.31□□□□□ -0.44
CAPN1-212ENST00000527887 TTC33Q6PID6 262 aaPredicted RBP12.31□□□□□ -0.44
CAPN1-212ENST00000527887 TUBA1AQ71U36 451 aa12.31□□□□□ -0.44
CAPN1-212ENST00000527887 CCDC80Q76M96 950 aa12.31□□□□□ -0.44
CAPN1-212ENST00000527887 GPR32P1Q8NGA4 272 aa12.31□□□□□ -0.44
CAPN1-212ENST00000527887 OR6T1Q8NGN1 323 aa12.31□□□□□ -0.44
CAPN1-212ENST00000527887 SPATA3Q8NHX4 192 aa12.31□□□□□ -0.44
CAPN1-212ENST00000527887 SLC26A7Q8TE54 656 aa12.31□□□□□ -0.44
CAPN1-212ENST00000527887 NEU4Q8WWR8 484 aaPredicted RBP12.31□□□□□ -0.44
CAPN1-212ENST00000527887 HTRA1Q92743 480 aa12.31□□□□□ -0.44
CAPN1-212ENST00000527887 POP5Q969H6 163 aaKnown RBP12.31□□□□□ -0.44
CAPN1-212ENST00000527887 ZNF837Q96EG3 531 aaPredicted RBP12.31□□□□□ -0.44
CAPN1-212ENST00000527887 MOGAT1Q96PD6 335 aa12.31□□□□□ -0.44
CAPN1-212ENST00000527887 SORCS2Q96PQ0 1159 aa12.31□□□□□ -0.44
CAPN1-212ENST00000527887 WFDC6Q9BQY6 131 aa12.31□□□□□ -0.44
CAPN1-212ENST00000527887 PIMREGQ9BSJ6 248 aa12.31□□□□□ -0.44
CAPN1-212ENST00000527887 ULBP2Q9BZM5 246 aa12.31□□□□□ -0.44
CAPN1-212ENST00000527887 MUC13Q9H3R2 512 aa12.31□□□□□ -0.44
CAPN1-212ENST00000527887 B3GNT2Q9NY97 397 aa12.31□□□□□ -0.44
CAPN1-212ENST00000527887 LPAR3Q9UBY5 353 aa12.31□□□□□ -0.44
CAPN1-212ENST00000527887 SPEF1Q9Y4P9 236 aa12.31□□□□□ -0.44
CAPN1-212ENST00000527887 ALPK2Q86TB3 2170 aa12.3□□□□□ -0.44
CAPN1-212ENST00000527887 IGHV2OR16-5A0A0B4J2B6 119 aa12.3□□□□□ -0.44
CAPN1-212ENST00000527887 M0R3H8 397 aa12.3□□□□□ -0.44
CAPN1-212ENST00000527887 HIST1H2ABP04908 130 aa12.3□□□□□ -0.44
CAPN1-212ENST00000527887 ADORA3P0DMS8 318 aa12.3□□□□□ -0.44
CAPN1-212ENST00000527887 HLA-DOBP13765 273 aa12.3□□□□□ -0.44
CAPN1-212ENST00000527887 NR4A2P43354 598 aa12.3□□□□□ -0.44
CAPN1-212ENST00000527887 CAPZA2P47755 286 aa12.3□□□□□ -0.44
CAPN1-212ENST00000527887 ACTR3P61158 418 aa12.3□□□□□ -0.44
CAPN1-212ENST00000527887 GSG1Q2KHT4 349 aa12.3□□□□□ -0.44
CAPN1-212ENST00000527887 VMACQ2NL98 169 aa12.3□□□□□ -0.44
CAPN1-212ENST00000527887 ZNF813Q6ZN06 617 aa12.3□□□□□ -0.44
CAPN1-212ENST00000527887 HIST3H2AQ7L7L0 130 aa12.3□□□□□ -0.44
CAPN1-212ENST00000527887 PIWIL3Q7Z3Z3 882 aaKnown RBP12.3□□□□□ -0.44
CAPN1-212ENST00000527887 MDP1Q86V88 176 aa12.3□□□□□ -0.44
CAPN1-212ENST00000527887 SLC15A3Q8IY34 581 aa12.3□□□□□ -0.44
CAPN1-212ENST00000527887 OR6N1Q8NGY5 312 aa12.3□□□□□ -0.44
CAPN1-212ENST00000527887 OR10A6Q8NH74 314 aa12.3□□□□□ -0.44
CAPN1-212ENST00000527887 OR6X1Q8NH79 312 aa12.3□□□□□ -0.44
CAPN1-212ENST00000527887 ADAMTS16Q8TE57 1224 aa12.3□□□□□ -0.44
CAPN1-212ENST00000527887 HIST1H2ACQ93077 130 aa12.3□□□□□ -0.44
CAPN1-212ENST00000527887 ASB9Q96DX5 294 aa12.3□□□□□ -0.44
CAPN1-212ENST00000527887 TXNDC15Q96J42 360 aa12.3□□□□□ -0.44
CAPN1-212ENST00000527887 DOK1Q99704 481 aa12.3□□□□□ -0.44
CAPN1-212ENST00000527887 VRK1Q99986 396 aaPredicted RBP12.3□□□□□ -0.44
CAPN1-212ENST00000527887 EMC6Q9BV81 110 aa12.3□□□□□ -0.44
CAPN1-212ENST00000527887 POLR2J2Q9GZM3 115 aaKnown RBP12.3□□□□□ -0.44
CAPN1-212ENST00000527887 POLR2J3Q9H1A7 115 aaKnown RBP12.3□□□□□ -0.44
CAPN1-212ENST00000527887 NANSQ9NR45 359 aa12.3□□□□□ -0.44
CAPN1-212ENST00000527887 MED29Q9NX70 200 aa12.3□□□□□ -0.44
CAPN1-212ENST00000527887 ZNF229Q9UJW7 825 aa12.3□□□□□ -0.44
CAPN1-212ENST00000527887 UBL3O95164 117 aa12.29□□□□□ -0.44
CAPN1-212ENST00000527887 IGF2P01344 180 aa12.29□□□□□ -0.44
CAPN1-212ENST00000527887 IFNA14P01570 189 aa12.29□□□□□ -0.44
CAPN1-212ENST00000527887 CD79AP11912 226 aa12.29□□□□□ -0.44
CAPN1-212ENST00000527887 CD247P20963 164 aa12.29□□□□□ -0.44
CAPN1-212ENST00000527887 THBS4P35443 961 aa12.29□□□□□ -0.44
CAPN1-212ENST00000527887 CSNK1A1P48729 337 aa12.29□□□□□ -0.44
CAPN1-212ENST00000527887 NPRL3Q12980 569 aa12.29□□□□□ -0.44
CAPN1-212ENST00000527887 CAMK2DQ13557 499 aa12.29□□□□□ -0.44
CAPN1-212ENST00000527887 DAG1Q14118 895 aa12.29□□□□□ -0.44
CAPN1-212ENST00000527887 SELPLGQ14242 412 aa12.29□□□□□ -0.44
CAPN1-212ENST00000527887 TRIM25Q14258 630 aaKnown RBP12.29□□□□□ -0.44
CAPN1-212ENST00000527887 NPTX1Q15818 432 aa12.29□□□□□ -0.44
CAPN1-212ENST00000527887 ZNF74Q16587 644 aa12.29□□□□□ -0.44
CAPN1-212ENST00000527887 FXNQ16595 210 aa12.29□□□□□ -0.44
CAPN1-212ENST00000527887 PHYHD1Q5SRE7 291 aa12.29□□□□□ -0.44
CAPN1-212ENST00000527887 CARD17Q5XLA6 110 aa12.29□□□□□ -0.44
CAPN1-212ENST00000527887 NANOGP8Q6NSW7 305 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms