RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 ZNF787Q6DD87 383 aa11.37□□□□□ -0.59
SMPD1-202ENST00000526280 SMARCD3Q6STE5 483 aa11.37□□□□□ -0.59
SMPD1-202ENST00000526280 THSD4Q6ZMP0 1018 aa11.37□□□□□ -0.59
SMPD1-202ENST00000526280 HDDC2Q7Z4H3 204 aa11.37□□□□□ -0.59
SMPD1-202ENST00000526280 GPR137CQ8N3F9 429 aa11.37□□□□□ -0.59
SMPD1-202ENST00000526280 AQP11Q8NBQ7 271 aa11.37□□□□□ -0.59
SMPD1-202ENST00000526280 OR10G2Q8NGC3 310 aa11.37□□□□□ -0.59
SMPD1-202ENST00000526280 GIPC3Q8TF64 312 aa11.37□□□□□ -0.59
SMPD1-202ENST00000526280 TMEM54Q969K7 222 aa11.37□□□□□ -0.59
SMPD1-202ENST00000526280 ZNF566Q969W8 418 aa11.37□□□□□ -0.59
SMPD1-202ENST00000526280 S100PBPQ96BU1 408 aa11.37□□□□□ -0.59
SMPD1-202ENST00000526280 MUS81Q96NY9 551 aa11.37□□□□□ -0.59
SMPD1-202ENST00000526280 ALKBH3Q96Q83 286 aaPredicted RBP11.37□□□□□ -0.59
SMPD1-202ENST00000526280 GPX7Q96SL4 187 aaPredicted RBP11.37□□□□□ -0.59
SMPD1-202ENST00000526280 MED18Q9BUE0 208 aa11.37□□□□□ -0.59
SMPD1-202ENST00000526280 DGCR6LQ9BY27 220 aa11.37□□□□□ -0.59
SMPD1-202ENST00000526280 MRPL13Q9BYD1 178 aaKnown RBP11.37□□□□□ -0.59
SMPD1-202ENST00000526280 NDEL1Q9GZM8 345 aa11.37□□□□□ -0.59
SMPD1-202ENST00000526280 GPR35Q9HC97 309 aa11.37□□□□□ -0.59
SMPD1-202ENST00000526280 ZNF346Q9UL40 294 aaKnown RBP11.37□□□□□ -0.59
SMPD1-202ENST00000526280 MGAT4BQ9UQ53 548 aa11.37□□□□□ -0.59
SMPD1-202ENST00000526280 CENPEQ02224 2701 aa11.37□□□□□ -0.59
SMPD1-202ENST00000526280 NAV2Q8IVL1 2488 aa11.37□□□□□ -0.59
SMPD1-202ENST00000526280 CELSR2Q9HCU4 2923 aa11.37□□□□□ -0.59
SMPD1-202ENST00000526280 NBPF19A0A087WUL8 3843 aa11.37□□□□□ -0.59
SMPD1-202ENST00000526280 UNC79Q9P2D8 2635 aa11.37□□□□□ -0.59
SMPD1-202ENST00000526280 CIB4A0PJX0 185 aa11.36□□□□□ -0.59
SMPD1-202ENST00000526280 ARRDC5A6NEK1 342 aa11.36□□□□□ -0.59
SMPD1-202ENST00000526280 CENPBD1B2RD01 187 aa11.36□□□□□ -0.59
SMPD1-202ENST00000526280 E2F6O75461 281 aa11.36□□□□□ -0.59
SMPD1-202ENST00000526280 TRMUO75648 421 aaKnown RBP11.36□□□□□ -0.59
SMPD1-202ENST00000526280 RAD51DO75771 328 aa11.36□□□□□ -0.59
SMPD1-202ENST00000526280 IGHG1P01857 330 aa11.36□□□□□ -0.59
SMPD1-202ENST00000526280 THBDP07204 575 aa11.36□□□□□ -0.59
SMPD1-202ENST00000526280 PGA4P0DJD7 388 aa11.36□□□□□ -0.59
SMPD1-202ENST00000526280 PGA3P0DJD8 388 aa11.36□□□□□ -0.59
SMPD1-202ENST00000526280 FASP25445 335 aa11.36□□□□□ -0.59
SMPD1-202ENST00000526280 CSNK1A1P48729 337 aa11.36□□□□□ -0.59
SMPD1-202ENST00000526280 ERVK-25P63136 954 aa11.36□□□□□ -0.59
SMPD1-202ENST00000526280 DAZAP2Q15038 168 aaPredicted RBP11.36□□□□□ -0.59
SMPD1-202ENST00000526280 GABRA6Q16445 453 aa11.36□□□□□ -0.59
SMPD1-202ENST00000526280 HIST3H3Q16695 136 aa11.36□□□□□ -0.59
SMPD1-202ENST00000526280 RFX4Q33E94 735 aa11.36□□□□□ -0.59
SMPD1-202ENST00000526280 OGFRL1Q5TC84 451 aaPredicted RBP11.36□□□□□ -0.59
SMPD1-202ENST00000526280 C9orf135Q5VTT2 229 aa11.36□□□□□ -0.59
SMPD1-202ENST00000526280 OR7E24Q6IFN5 339 aa11.36□□□□□ -0.59
SMPD1-202ENST00000526280 HMBOX1Q6NT76 420 aa11.36□□□□□ -0.59
SMPD1-202ENST00000526280 DPY19L2P2Q6ZN68 376 aa11.36□□□□□ -0.59
SMPD1-202ENST00000526280 FAM122BQ7Z309 247 aa11.36□□□□□ -0.59
SMPD1-202ENST00000526280 P2RY8Q86VZ1 359 aa11.36□□□□□ -0.59
SMPD1-202ENST00000526280 ZNF295-AS1Q8N0V1 137 aa11.36□□□□□ -0.59
SMPD1-202ENST00000526280 C1orf162Q8NEQ5 155 aaPredicted RBP11.36□□□□□ -0.59
SMPD1-202ENST00000526280 OR6N1Q8NGY5 312 aa11.36□□□□□ -0.59
SMPD1-202ENST00000526280 HSD17B8Q92506 261 aa11.36□□□□□ -0.59
SMPD1-202ENST00000526280 MARVELD3Q96A59 401 aa11.36□□□□□ -0.59
SMPD1-202ENST00000526280 ZNF837Q96EG3 531 aaPredicted RBP11.36□□□□□ -0.59
SMPD1-202ENST00000526280 BOD1Q96IK1 185 aa11.36□□□□□ -0.59
SMPD1-202ENST00000526280 TSPAN32Q96QS1 320 aa11.36□□□□□ -0.59
SMPD1-202ENST00000526280 FEVQ99581 238 aa11.36□□□□□ -0.59
SMPD1-202ENST00000526280 KATNB1Q9BVA0 655 aa11.36□□□□□ -0.59
SMPD1-202ENST00000526280 POLDIP3Q9BY77 421 aaKnown RBP11.36□□□□□ -0.59
SMPD1-202ENST00000526280 OR52D1Q9H346 318 aa11.36□□□□□ -0.59
SMPD1-202ENST00000526280 CRLF2Q9HC73 371 aa11.36□□□□□ -0.59
SMPD1-202ENST00000526280 B3GAT2Q9NPZ5 323 aa11.36□□□□□ -0.59
SMPD1-202ENST00000526280 NRIP3Q9NQ35 241 aa11.36□□□□□ -0.59
SMPD1-202ENST00000526280 GLTPQ9NZD2 209 aa11.36□□□□□ -0.59
SMPD1-202ENST00000526280 PDP1Q9P0J1 537 aaPredicted RBP11.36□□□□□ -0.59
SMPD1-202ENST00000526280 OR5H1A6NKK0 313 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 FCGR1AP12314 374 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 GSTM3P21266 225 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 PEX2P28328 305 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 TOP3AQ13472 1001 aaPredicted RBP11.35□□□□□ -0.59
SMPD1-202ENST00000526280 CEACAM16Q2WEN9 425 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 TIMM23BQ5SRD1 257 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 FAM205BPQ63HN1 556 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 SHQ1Q6PI26 577 aaKnown RBP11.35□□□□□ -0.59
SMPD1-202ENST00000526280 LRFN4Q6PJG9 635 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 CD300LDQ6UXZ3 194 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 ZNF620Q6ZNG0 422 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 RASSF6Q6ZTQ3 369 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 ARIH2OSQ8N7S6 290 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 ZNF519Q8TB69 540 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 FANK1Q8TC84 345 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 LRTOMTQ8WZ04 291 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 GTPBP3Q969Y2 492 aaKnown RBP11.35□□□□□ -0.59
SMPD1-202ENST00000526280 NRBF2Q96F24 287 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 PKP2Q99959 881 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 BDH2Q9BUT1 245 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 ZNF226Q9NYT6 803 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 GRHPRQ9UBQ7 328 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 IL20RAQ9UHF4 553 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 ADAM18Q9Y3Q7 739 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 NOTCH2Q04721 2471 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 DCHS2Q6V1P9 2916 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 A6NIZ1 184 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 CASKO14936 926 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 CDH2P19022 906 aaPredicted RBP11.35□□□□□ -0.59
SMPD1-202ENST00000526280 PRKACGP22612 351 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 CRYGSP22914 178 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 SLC6A6P31641 620 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms