RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 NR0B2Q15466 257 aa11.97□□□□□ -0.49
CAPN1-202ENST00000524773 GUCA2BQ16661 112 aa11.97□□□□□ -0.49
CAPN1-202ENST00000524773 PRICKLE4Q2TBC4 344 aa11.97□□□□□ -0.49
CAPN1-202ENST00000524773 FAM78AQ5JUQ0 283 aa11.97□□□□□ -0.49
CAPN1-202ENST00000524773 LINC01590Q5TEZ4 76 aa11.97□□□□□ -0.49
CAPN1-202ENST00000524773 ZFP82Q8N141 532 aa11.97□□□□□ -0.49
CAPN1-202ENST00000524773 METTL27Q8N6F8 245 aaPredicted RBP11.97□□□□□ -0.49
CAPN1-202ENST00000524773 CDRT4Q8N9R6 151 aa11.97□□□□□ -0.49
CAPN1-202ENST00000524773 C2CD4CQ8TF44 421 aa11.97□□□□□ -0.49
CAPN1-202ENST00000524773 OR2A5Q96R48 311 aa11.97□□□□□ -0.49
CAPN1-202ENST00000524773 ZNF471Q9BX82 626 aaPredicted RBP11.97□□□□□ -0.49
CAPN1-202ENST00000524773 SOX1O00570 391 aaPredicted RBP11.97□□□□□ -0.49
CAPN1-202ENST00000524773 RDH16O75452 317 aa11.97□□□□□ -0.49
CAPN1-202ENST00000524773 UPK3AO75631 287 aa11.97□□□□□ -0.49
CAPN1-202ENST00000524773 PLGP00747 810 aaPredicted RBP11.97□□□□□ -0.49
CAPN1-202ENST00000524773 CCKBRP32239 447 aa11.97□□□□□ -0.49
CAPN1-202ENST00000524773 LSSP48449 732 aa11.97□□□□□ -0.49
CAPN1-202ENST00000524773 SGCGQ13326 291 aa11.97□□□□□ -0.49
CAPN1-202ENST00000524773 UBXN2BQ14CS0 331 aa11.97□□□□□ -0.49
CAPN1-202ENST00000524773 OR7A5Q15622 319 aa11.97□□□□□ -0.49
CAPN1-202ENST00000524773 CST6Q15828 149 aa11.97□□□□□ -0.49
CAPN1-202ENST00000524773 Q499Y3 187 aa11.97□□□□□ -0.49
CAPN1-202ENST00000524773 C2orf27AQ580R0 203 aa11.97□□□□□ -0.49
CAPN1-202ENST00000524773 LY6G6FQ5SQ64 297 aa11.97□□□□□ -0.49
CAPN1-202ENST00000524773 ARHGAP40Q5TG30 622 aa11.97□□□□□ -0.49
CAPN1-202ENST00000524773 MDGA2Q7Z553 956 aa11.97□□□□□ -0.49
CAPN1-202ENST00000524773 CD163Q86VB7 1156 aa11.97□□□□□ -0.49
CAPN1-202ENST00000524773 LMAN2LQ9H0V9 348 aa11.97□□□□□ -0.49
CAPN1-202ENST00000524773 ATG5Q9H1Y0 275 aa11.97□□□□□ -0.49
CAPN1-202ENST00000524773 CGGBP1Q9UFW8 167 aaPredicted RBP11.97□□□□□ -0.49
CAPN1-202ENST00000524773 PLEKHA6Q9Y2H5 1048 aa11.97□□□□□ -0.49
CAPN1-202ENST00000524773 SNRPGP15A8MWD9 76 aa11.97□□□□□ -0.49
CAPN1-202ENST00000524773 H7C417 338 aa11.97□□□□□ -0.49
CAPN1-202ENST00000524773 OR10H2O60403 315 aa11.97□□□□□ -0.49
CAPN1-202ENST00000524773 CTAG2O75638 210 aa11.97□□□□□ -0.49
CAPN1-202ENST00000524773 AKR7A3O95154 331 aa11.97□□□□□ -0.49
CAPN1-202ENST00000524773 AGR2O95994 175 aa11.97□□□□□ -0.49
CAPN1-202ENST00000524773 IGFALSP35858 605 aa11.97□□□□□ -0.49
CAPN1-202ENST00000524773 UBE2IP63279 158 aaKnown RBP11.97□□□□□ -0.49
CAPN1-202ENST00000524773 MGAT2Q10469 447 aa11.97□□□□□ -0.49
CAPN1-202ENST00000524773 CLVS2Q5SYC1 327 aa11.97□□□□□ -0.49
CAPN1-202ENST00000524773 SHEQ5VZ18 495 aa11.97□□□□□ -0.49
CAPN1-202ENST00000524773 USP53Q70EK8 1073 aa11.97□□□□□ -0.49
CAPN1-202ENST00000524773 RHOUQ7L0Q8 258 aa11.97□□□□□ -0.49
CAPN1-202ENST00000524773 RTN4RL2Q86UN3 420 aa11.97□□□□□ -0.49
CAPN1-202ENST00000524773 POMGNT2Q8NAT1 580 aa11.97□□□□□ -0.49
CAPN1-202ENST00000524773 CLRN3Q8NCR9 226 aa11.97□□□□□ -0.49
CAPN1-202ENST00000524773 OR10Z1Q8NGY1 313 aa11.97□□□□□ -0.49
CAPN1-202ENST00000524773 SLC2A12Q8TD20 617 aa11.97□□□□□ -0.49
CAPN1-202ENST00000524773 FAM3CQ92520 227 aa11.97□□□□□ -0.49
CAPN1-202ENST00000524773 EMC3Q9P0I2 261 aa11.97□□□□□ -0.49
CAPN1-202ENST00000524773 MTFP1Q9UDX5 166 aa11.97□□□□□ -0.49
CAPN1-202ENST00000524773 PLCL2Q9UPR0 1127 aa11.97□□□□□ -0.49
CAPN1-202ENST00000524773 SLC27A6Q9Y2P4 619 aa11.97□□□□□ -0.49
CAPN1-202ENST00000524773 FITM1A5D6W6 292 aa11.96□□□□□ -0.49
CAPN1-202ENST00000524773 GGT3PA6NGU5 568 aa11.96□□□□□ -0.49
CAPN1-202ENST00000524773 ELOA3DA6NLF2 546 aaPredicted RBP11.96□□□□□ -0.49
CAPN1-202ENST00000524773 H0YGG7 62 aa11.96□□□□□ -0.49
CAPN1-202ENST00000524773 OIP5O43482 229 aa11.96□□□□□ -0.49
CAPN1-202ENST00000524773 WISP1O95388 367 aa11.96□□□□□ -0.49
CAPN1-202ENST00000524773 IL5P05113 134 aa11.96□□□□□ -0.49
CAPN1-202ENST00000524773 ARF3P61204 181 aaPredicted RBP11.96□□□□□ -0.49
CAPN1-202ENST00000524773 ALKBH1Q13686 389 aaKnown RBP11.96□□□□□ -0.49
CAPN1-202ENST00000524773 ELOA3BQ3SY89 546 aa11.96□□□□□ -0.49
CAPN1-202ENST00000524773 SLC22A6Q4U2R8 563 aa11.96□□□□□ -0.49
CAPN1-202ENST00000524773 TMEM240Q5SV17 173 aa11.96□□□□□ -0.49
CAPN1-202ENST00000524773 SLC35F3Q8IY50 421 aa11.96□□□□□ -0.49
CAPN1-202ENST00000524773 BEST3Q8N1M1 668 aa11.96□□□□□ -0.49
CAPN1-202ENST00000524773 PRSS35Q8N3Z0 413 aa11.96□□□□□ -0.49
CAPN1-202ENST00000524773 STEAP2Q8NFT2 490 aa11.96□□□□□ -0.49
CAPN1-202ENST00000524773 ELOA3Q8NG57 546 aa11.96□□□□□ -0.49
CAPN1-202ENST00000524773 TSEN15Q8WW01 171 aaKnown RBP11.96□□□□□ -0.49
CAPN1-202ENST00000524773 NSMAFQ92636 917 aa11.96□□□□□ -0.49
CAPN1-202ENST00000524773 PDCD10Q9BUL8 212 aa11.96□□□□□ -0.49
CAPN1-202ENST00000524773 TMPRSS13Q9BYE2 586 aa11.96□□□□□ -0.49
CAPN1-202ENST00000524773 ASF1BQ9NVP2 202 aa11.96□□□□□ -0.49
CAPN1-202ENST00000524773 PRAMEF2O60811 474 aa11.96□□□□□ -0.5
CAPN1-202ENST00000524773 ATG12O94817 140 aa11.96□□□□□ -0.5
CAPN1-202ENST00000524773 EN2P19622 333 aaPredicted RBP11.96□□□□□ -0.5
CAPN1-202ENST00000524773 CTNNB1P35222 781 aa11.96□□□□□ -0.5
CAPN1-202ENST00000524773 TFF2Q03403 129 aa11.96□□□□□ -0.5
CAPN1-202ENST00000524773 C2orf76Q3KRA6 126 aa11.96□□□□□ -0.5
CAPN1-202ENST00000524773 PDSS1Q5T2R2 415 aa11.96□□□□□ -0.5
CAPN1-202ENST00000524773 ENPP7Q6UWV6 458 aa11.96□□□□□ -0.5
CAPN1-202ENST00000524773 CCDC74AQ96AQ1 378 aa11.96□□□□□ -0.5
CAPN1-202ENST00000524773 NKX6-2Q9C056 277 aaPredicted RBP11.96□□□□□ -0.5
CAPN1-202ENST00000524773 SLITRK2Q9H156 845 aa11.96□□□□□ -0.5
CAPN1-202ENST00000524773 APMAPQ9HDC9 416 aa11.96□□□□□ -0.5
CAPN1-202ENST00000524773 MKKSQ9NPJ1 570 aaPredicted RBP11.96□□□□□ -0.5
CAPN1-202ENST00000524773 SLC39A1Q9NY26 324 aa11.96□□□□□ -0.5
CAPN1-202ENST00000524773 TBC1D3DA0A087WVF3 549 aa11.95□□□□□ -0.5
CAPN1-202ENST00000524773 TBC1D3IA0A087WXS9 549 aa11.95□□□□□ -0.5
CAPN1-202ENST00000524773 HMSDA8MTL9 139 aa11.95□□□□□ -0.5
CAPN1-202ENST00000524773 TBC1D3LB9A6J9 549 aa11.95□□□□□ -0.5
CAPN1-202ENST00000524773 ZNF749O43361 778 aa11.95□□□□□ -0.5
CAPN1-202ENST00000524773 ZNF254O75437 659 aa11.95□□□□□ -0.5
CAPN1-202ENST00000524773 SLC25A12O75746 678 aa11.95□□□□□ -0.5
CAPN1-202ENST00000524773 TBC1D3HP0C7X1 549 aa11.95□□□□□ -0.5
CAPN1-202ENST00000524773 ACTR1BP42025 376 aa11.95□□□□□ -0.5
CAPN1-202ENST00000524773 CTXN1P60606 82 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms