RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 PLCL2Q9UPR0 1127 aa10.05□□□□□ -0.8
HDAC9-228ENST00000524023 PCDH15Q96QU1 1955 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 H0YIG0 161 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 MEN1O00255 615 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 ZNF432O94892 652 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 GLSO94925 669 aaPredicted RBP10.04□□□□□ -0.8
HDAC9-228ENST00000524023 RENP00797 406 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 IGLV3-19P01714 112 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 CPN1P15169 458 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 CSRP1P21291 193 aaKnown RBP10.04□□□□□ -0.8
HDAC9-228ENST00000524023 ITPKBP27987 946 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 AP2S1P53680 142 aaPredicted RBP10.04□□□□□ -0.8
HDAC9-228ENST00000524023 EGR3Q06889 387 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 DMWDQ09019 674 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 PLA2G7Q13093 441 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 BIKQ13323 160 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 CBFBQ13951 182 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 POU4F3Q15319 338 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 SIGIRRQ6IA17 410 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 RFPL4BQ6ZWI9 263 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 NUP54Q7Z3B4 507 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 ZNF417Q8TAU3 575 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 TMEM106AQ96A25 262 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 SLC46A1Q96NT5 459 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 COMMD4Q9H0A8 199 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 C12orf10Q9HB07 376 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 PNO1Q9NRX1 252 aaKnown RBP10.04□□□□□ -0.8
HDAC9-228ENST00000524023 LANCL2Q9NS86 450 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 GLTPQ9NZD2 209 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 PCDHGA5Q9Y5G8 931 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 BRWD1Q9NSI6 2320 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 A0A1W2PPC4 97 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 RPS10-NUDT3A0A1W2PQS6 291 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 TMEM212A6NML5 194 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 A8MUA0 341 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 H0YC42 278 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 SHOXO15266 292 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 TPPPO94811 219 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 GPANK1O95872 356 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 HIST1H2ABP04908 130 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 IFNGR1P15260 489 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 ANXA7P20073 488 aaKnown RBP10.04□□□□□ -0.8
HDAC9-228ENST00000524023 ENPP1P22413 925 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 FASLGP48023 281 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 MECP2P51608 486 aaKnown RBP10.04□□□□□ -0.8
HDAC9-228ENST00000524023 TCTE1Q5JU00 501 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 CLLU1Q5K131 121 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 HIST3H2AQ7L7L0 130 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 KANSL1Q7Z3B3 1105 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 SDR16C5Q8N3Y7 309 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 PRSS35Q8N3Z0 413 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 OR51A4Q8NGJ6 313 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 GPR148Q8TDV2 347 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 THEM6Q8WUY1 208 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 HIST1H2ACQ93077 130 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 RBP7Q96R05 134 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 INTS14Q96SY0 518 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 ADOQ96SZ5 270 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 ELF4Q99607 663 aaPredicted RBP10.04□□□□□ -0.8
HDAC9-228ENST00000524023 ULBP3Q9BZM4 244 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 CHIAQ9BZP6 476 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 RTN4RQ9BZR6 473 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 LAT2Q9GZY6 243 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 SYT4Q9H2B2 425 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 CDCP1Q9H5V8 836 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 SOHLH2Q9NX45 425 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 PIPOXQ9P0Z9 390 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 MGAT4CQ9UBM8 478 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 UBQLN2Q9UHD9 624 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 STEAP1Q9UHE8 339 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 MSRAQ9UJ68 235 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 TMEM14AQ9Y6G1 99 aa10.04□□□□□ -0.8
HDAC9-228ENST00000524023 IGHV5-51A0A0C4DH38 117 aa10.03□□□□□ -0.8
HDAC9-228ENST00000524023 FRG2CA6NGY1 282 aa10.03□□□□□ -0.8
HDAC9-228ENST00000524023 XRCC3O43542 346 aa10.03□□□□□ -0.8
HDAC9-228ENST00000524023 ICOSLGO75144 302 aa10.03□□□□□ -0.8
HDAC9-228ENST00000524023 NDUFB6O95139 128 aa10.03□□□□□ -0.8
HDAC9-228ENST00000524023 CFDP00746 253 aaPredicted RBP10.03□□□□□ -0.8
HDAC9-228ENST00000524023 ALDOBP05062 364 aa10.03□□□□□ -0.8
HDAC9-228ENST00000524023 IL5P05113 134 aa10.03□□□□□ -0.8
HDAC9-228ENST00000524023 MAOBP27338 520 aa10.03□□□□□ -0.8
HDAC9-228ENST00000524023 RORAP35398 523 aa10.03□□□□□ -0.8
HDAC9-228ENST00000524023 GFERP55789 205 aa10.03□□□□□ -0.8
HDAC9-228ENST00000524023 SCAND1P57086 179 aa10.03□□□□□ -0.8
HDAC9-228ENST00000524023 TSPAN5P62079 268 aa10.03□□□□□ -0.8
HDAC9-228ENST00000524023 ZNF117Q03924 483 aa10.03□□□□□ -0.8
HDAC9-228ENST00000524023 RASGEF1BQ0VAM2 473 aa10.03□□□□□ -0.8
HDAC9-228ENST00000524023 ODF4Q2M2E3 257 aa10.03□□□□□ -0.8
HDAC9-228ENST00000524023 ZNF227Q86WZ6 799 aa10.03□□□□□ -0.8
HDAC9-228ENST00000524023 TMEM151BQ8IW70 566 aa10.03□□□□□ -0.8
HDAC9-228ENST00000524023 PM20D2Q8IYS1 436 aa10.03□□□□□ -0.8
HDAC9-228ENST00000524023 PRR22Q8IZ63 422 aa10.03□□□□□ -0.8
HDAC9-228ENST00000524023 SIX5Q8N196 739 aa10.03□□□□□ -0.8
HDAC9-228ENST00000524023 MEIOBQ8N635 442 aa10.03□□□□□ -0.8
HDAC9-228ENST00000524023 UXS1Q8NBZ7 420 aa10.03□□□□□ -0.8
HDAC9-228ENST00000524023 OR8K3Q8NH51 312 aa10.03□□□□□ -0.8
HDAC9-228ENST00000524023 CEP76Q8TAP6 659 aa10.03□□□□□ -0.8
HDAC9-228ENST00000524023 SUN5Q8TC36 379 aa10.03□□□□□ -0.8
HDAC9-228ENST00000524023 DCBLD2Q96PD2 775 aa10.03□□□□□ -0.8
HDAC9-228ENST00000524023 TGM7Q96PF1 710 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms