RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 MIDNQ504T8 468 aa5.36□□□□□ -1.55
PABPC1-220ENST00000522658 PDLIM3Q53GG5 364 aaPredicted RBP5.36□□□□□ -1.55
PABPC1-220ENST00000522658 ARMCX4Q5H9R4 360 aa5.36□□□□□ -1.55
PABPC1-220ENST00000522658 MRPL2Q5T653 305 aaKnown RBP5.36□□□□□ -1.55
PABPC1-220ENST00000522658 C1orf140Q5VVS0 124 aa5.36□□□□□ -1.55
PABPC1-220ENST00000522658 WBP2NLQ6ICG8 309 aa5.36□□□□□ -1.55
PABPC1-220ENST00000522658 OLIG3Q7RTU3 272 aa5.36□□□□□ -1.55
PABPC1-220ENST00000522658 MDP1Q86V88 176 aa5.36□□□□□ -1.55
PABPC1-220ENST00000522658 ANKRD46Q86W74 232 aa5.36□□□□□ -1.55
PABPC1-220ENST00000522658 CLECL1Q8IZS7 167 aa5.36□□□□□ -1.55
PABPC1-220ENST00000522658 KIRREL3Q8IZU9 778 aa5.36□□□□□ -1.55
PABPC1-220ENST00000522658 CLEC4FQ8N1N0 589 aa5.36□□□□□ -1.55
PABPC1-220ENST00000522658 ICA1LQ8NDH6 482 aa5.36□□□□□ -1.55
PABPC1-220ENST00000522658 MIPOL1Q8TD10 442 aa5.36□□□□□ -1.55
PABPC1-220ENST00000522658 ST7LQ8TDW4 575 aa5.36□□□□□ -1.55
PABPC1-220ENST00000522658 CNOT9Q92600 299 aaKnown RBP5.36□□□□□ -1.55
PABPC1-220ENST00000522658 COQ8BQ96D53 544 aa5.36□□□□□ -1.55
PABPC1-220ENST00000522658 APOPT1Q96IL0 206 aa5.36□□□□□ -1.55
PABPC1-220ENST00000522658 TRNT1Q96Q11 434 aaKnown RBP5.36□□□□□ -1.55
PABPC1-220ENST00000522658 SLC6A7Q99884 636 aa5.36□□□□□ -1.55
PABPC1-220ENST00000522658 GAL3ST1Q99999 423 aa5.36□□□□□ -1.55
PABPC1-220ENST00000522658 GATA5Q9BWX5 397 aaPredicted RBP5.36□□□□□ -1.55
PABPC1-220ENST00000522658 LINC00470Q9BZP3 86 aa5.36□□□□□ -1.55
PABPC1-220ENST00000522658 TUBB1Q9H4B7 451 aa5.36□□□□□ -1.55
PABPC1-220ENST00000522658 ZMAT3Q9HA38 289 aaKnown RBP5.36□□□□□ -1.55
PABPC1-220ENST00000522658 ZNF275Q9NSD4 429 aaPredicted RBP5.36□□□□□ -1.55
PABPC1-220ENST00000522658 DECR2Q9NUI1 292 aa5.36□□□□□ -1.55
PABPC1-220ENST00000522658 TREM2Q9NZC2 230 aa5.36□□□□□ -1.55
PABPC1-220ENST00000522658 CRNNQ9UBG3 495 aaPredicted RBP5.36□□□□□ -1.55
PABPC1-220ENST00000522658 GIMAP2Q9UG22 337 aa5.36□□□□□ -1.55
PABPC1-220ENST00000522658 SLC7A8Q9UHI5 535 aa5.36□□□□□ -1.55
PABPC1-220ENST00000522658 FBXL3Q9UKT7 428 aa5.36□□□□□ -1.55
PABPC1-220ENST00000522658 EMCNQ9ULC0 261 aa5.36□□□□□ -1.55
PABPC1-220ENST00000522658 RCE1Q9Y256 329 aa5.36□□□□□ -1.55
PABPC1-220ENST00000522658 POFUT2Q9Y2G5 429 aa5.36□□□□□ -1.55
PABPC1-220ENST00000522658 MALRD1Q5VYJ5 2156 aa5.36□□□□□ -1.55
PABPC1-220ENST00000522658 ALPK2Q86TB3 2170 aa5.35□□□□□ -1.55
PABPC1-220ENST00000522658 LOC105371242A0A075B767 164 aa5.35□□□□□ -1.55
PABPC1-220ENST00000522658 PRSS51A0A1B0GVH4 220 aa5.35□□□□□ -1.55
PABPC1-220ENST00000522658 SLC22A23A1A5C7 686 aa5.35□□□□□ -1.55
PABPC1-220ENST00000522658 CLDN24A6NM45 220 aa5.35□□□□□ -1.55
PABPC1-220ENST00000522658 ZNF99A8MXY4 864 aaPredicted RBP5.35□□□□□ -1.55
PABPC1-220ENST00000522658 J3QLI3 93 aa5.35□□□□□ -1.55
PABPC1-220ENST00000522658 FAAHO00519 579 aa5.35□□□□□ -1.55
PABPC1-220ENST00000522658 KCNAB3O43448 404 aa5.35□□□□□ -1.55
PABPC1-220ENST00000522658 UPK3AO75631 287 aa5.35□□□□□ -1.55
PABPC1-220ENST00000522658 SEC14L2O76054 403 aa5.35□□□□□ -1.55
PABPC1-220ENST00000522658 ANP32DO95626 131 aa5.35□□□□□ -1.55
PABPC1-220ENST00000522658 IGLV1-44P01699 117 aa5.35□□□□□ -1.55
PABPC1-220ENST00000522658 GUSBP08236 651 aa5.35□□□□□ -1.55
PABPC1-220ENST00000522658 G6PDP11413 515 aa5.35□□□□□ -1.55
PABPC1-220ENST00000522658 GATA3P23771 443 aa5.35□□□□□ -1.55
PABPC1-220ENST00000522658 S100A3P33764 101 aa5.35□□□□□ -1.55
PABPC1-220ENST00000522658 ALDH3B1P43353 468 aa5.35□□□□□ -1.55
PABPC1-220ENST00000522658 PTDSS1P48651 473 aaKnown RBP5.35□□□□□ -1.55
PABPC1-220ENST00000522658 EVX1P49640 407 aa5.35□□□□□ -1.55
PABPC1-220ENST00000522658 CRISP3P54108 245 aa5.35□□□□□ -1.55
PABPC1-220ENST00000522658 TMEM33P57088 247 aa5.35□□□□□ -1.55
PABPC1-220ENST00000522658 ARF1P84077 181 aaKnown RBP5.35□□□□□ -1.55
PABPC1-220ENST00000522658 POU3F1Q03052 451 aaPredicted RBP5.35□□□□□ -1.55
PABPC1-220ENST00000522658 IFFO1Q0D2I5 559 aa5.35□□□□□ -1.55
PABPC1-220ENST00000522658 LRRC74AQ0VAA2 488 aa5.35□□□□□ -1.55
PABPC1-220ENST00000522658 CAMK2DQ13557 499 aa5.35□□□□□ -1.55
PABPC1-220ENST00000522658 FHL2Q14192 279 aa5.35□□□□□ -1.55
PABPC1-220ENST00000522658 MOGQ16653 247 aa5.35□□□□□ -1.55
PABPC1-220ENST00000522658 MMEL1Q495T6 779 aa5.35□□□□□ -1.55
PABPC1-220ENST00000522658 XKR7Q5GH72 579 aa5.35□□□□□ -1.55
PABPC1-220ENST00000522658 C6orf136Q5SQH8 315 aa5.35□□□□□ -1.55
PABPC1-220ENST00000522658 CARD17Q5XLA6 110 aa5.35□□□□□ -1.55
PABPC1-220ENST00000522658 RGS7BPQ6MZT1 257 aaPredicted RBP5.35□□□□□ -1.55
PABPC1-220ENST00000522658 ZNF813Q6ZN06 617 aa5.35□□□□□ -1.55
PABPC1-220ENST00000522658 LRRC74BQ6ZQY2 392 aa5.35□□□□□ -1.55
PABPC1-220ENST00000522658 ZCCHC23Q6ZST2 131 aa5.35□□□□□ -1.55
PABPC1-220ENST00000522658 CREB3L2Q70SY1 520 aa5.35□□□□□ -1.55
PABPC1-220ENST00000522658 C1QL2Q7Z5L3 287 aa5.35□□□□□ -1.55
PABPC1-220ENST00000522658 UEVLDQ8IX04 471 aa5.35□□□□□ -1.55
PABPC1-220ENST00000522658 LRRC34Q8IZ02 419 aa5.35□□□□□ -1.55
PABPC1-220ENST00000522658 CPEB3Q8NE35 698 aaKnown RBP5.35□□□□□ -1.55
PABPC1-220ENST00000522658 OR6N1Q8NGY5 312 aa5.35□□□□□ -1.55
PABPC1-220ENST00000522658 KIF18AQ8NI77 898 aa5.35□□□□□ -1.55
PABPC1-220ENST00000522658 BCL2L2Q92843 193 aaPredicted RBP5.35□□□□□ -1.55
PABPC1-220ENST00000522658 NEURL3Q96EH8 262 aa5.35□□□□□ -1.55
PABPC1-220ENST00000522658 PPP1R36Q96LQ0 422 aa5.35□□□□□ -1.55
PABPC1-220ENST00000522658 PANX1Q96RD7 426 aa5.35□□□□□ -1.55
PABPC1-220ENST00000522658 DOK1Q99704 481 aa5.35□□□□□ -1.55
PABPC1-220ENST00000522658 MRPL37Q9BZE1 423 aaKnown RBP5.35□□□□□ -1.55
PABPC1-220ENST00000522658 ULBP2Q9BZM5 246 aa5.35□□□□□ -1.55
PABPC1-220ENST00000522658 ZNF385DQ9H6B1 395 aa5.35□□□□□ -1.55
PABPC1-220ENST00000522658 ZNF665Q9H7R5 613 aa5.35□□□□□ -1.55
PABPC1-220ENST00000522658 ZNF696Q9H7X3 374 aa5.35□□□□□ -1.55
PABPC1-220ENST00000522658 MTHFD2LQ9H903 347 aaPredicted RBP5.35□□□□□ -1.55
PABPC1-220ENST00000522658 KCNE5Q9UJ90 142 aa5.35□□□□□ -1.55
PABPC1-220ENST00000522658 SLC13A4Q9UKG4 626 aa5.35□□□□□ -1.55
PABPC1-220ENST00000522658 FZR1Q9UM11 496 aa5.35□□□□□ -1.55
PABPC1-220ENST00000522658 PPIAL4AQ9Y536 164 aa5.35□□□□□ -1.55
PABPC1-220ENST00000522658 HEATR1Q9H583 2144 aaKnown RBP5.35□□□□□ -1.55
PABPC1-220ENST00000522658 PLCE1Q9P212 2302 aa5.34□□□□□ -1.55
PABPC1-220ENST00000522658 TLDC2A0PJX2 215 aa5.34□□□□□ -1.55
PABPC1-220ENST00000522658 AGAP5A6NIR3 686 aa5.34□□□□□ -1.55
PABPC1-220ENST00000522658 ZNF726A6NNF4 738 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms