RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 ZNHIT3Q15649 155 aaPredicted RBP11.01□□□□□ -0.65
SPIDR-217ENST00000522117 HMGN3Q15651 99 aa11.01□□□□□ -0.65
SPIDR-217ENST00000522117 DCAF4L1Q3SXM0 396 aa11.01□□□□□ -0.65
SPIDR-217ENST00000522117 TBC1D3GQ6DHY5 549 aa11.01□□□□□ -0.65
SPIDR-217ENST00000522117 LPCAT3Q6P1A2 487 aa11.01□□□□□ -0.65
SPIDR-217ENST00000522117 ADCK2Q7Z695 626 aa11.01□□□□□ -0.65
SPIDR-217ENST00000522117 CPOQ8IVL8 374 aa11.01□□□□□ -0.65
SPIDR-217ENST00000522117 CLDN19Q8N6F1 224 aa11.01□□□□□ -0.65
SPIDR-217ENST00000522117 LINC01465Q8N7H1 131 aa11.01□□□□□ -0.65
SPIDR-217ENST00000522117 SYNPRQ8TBG9 265 aa11.01□□□□□ -0.65
SPIDR-217ENST00000522117 OR8D1Q8WZ84 308 aa11.01□□□□□ -0.65
SPIDR-217ENST00000522117 NTNG2Q96CW9 530 aa11.01□□□□□ -0.65
SPIDR-217ENST00000522117 TMEM169Q96HH4 297 aa11.01□□□□□ -0.65
SPIDR-217ENST00000522117 S100A13Q99584 98 aa11.01□□□□□ -0.65
SPIDR-217ENST00000522117 OR52A5Q9H2C5 316 aa11.01□□□□□ -0.65
SPIDR-217ENST00000522117 EXO5Q9H790 373 aa11.01□□□□□ -0.65
SPIDR-217ENST00000522117 SPHK2Q9NRA0 654 aa11.01□□□□□ -0.65
SPIDR-217ENST00000522117 UBQLN4Q9NRR5 601 aa11.01□□□□□ -0.65
SPIDR-217ENST00000522117 SEMA4GQ9NTN9 838 aa11.01□□□□□ -0.65
SPIDR-217ENST00000522117 CNIH4Q9P003 139 aa11.01□□□□□ -0.65
SPIDR-217ENST00000522117 STARD10Q9Y365 291 aa11.01□□□□□ -0.65
SPIDR-217ENST00000522117 HDGFL3Q9Y3E1 203 aa11.01□□□□□ -0.65
SPIDR-217ENST00000522117 A0A087WUJ7 227 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 M0R036 132 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 GPR37L1O60883 481 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 NTN1O95631 604 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 PTBP3O95758 552 aaKnown RBP11□□□□□ -0.65
SPIDR-217ENST00000522117 OPN1LWP04000 364 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 HKR1P10072 659 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 PGAM2P15259 253 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 FAUP35544 74 aaKnown RBP11□□□□□ -0.65
SPIDR-217ENST00000522117 SOAT1P35610 550 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 RBM34P42696 430 aaKnown RBP11□□□□□ -0.65
SPIDR-217ENST00000522117 RGRP47804 291 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 PCBP4P57723 403 aaKnown RBP11□□□□□ -0.65
SPIDR-217ENST00000522117 RPS26P62854 115 aaKnown RBP11□□□□□ -0.65
SPIDR-217ENST00000522117 TRA2AQ13595 282 aaKnown RBP eCLIP11□□□□□ -0.65
SPIDR-217ENST00000522117 TOMM34Q15785 309 aaPredicted RBP11□□□□□ -0.65
SPIDR-217ENST00000522117 TNFAIP8L2Q6P589 184 aaPredicted RBP11□□□□□ -0.65
SPIDR-217ENST00000522117 BTNL8Q6UX41 500 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 INO80EQ8NBZ0 244 aaPredicted RBP11□□□□□ -0.65
SPIDR-217ENST00000522117 ST7LQ8TDW4 575 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 CCDC74BQ96LY2 380 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 OR5B2Q96R09 309 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 NDC1Q9BTX1 674 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 ACTRT3Q9BYD9 372 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 ZFYVE1Q9HBF4 777 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 PCDHB8Q9UN66 801 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 NOD1Q9Y239 953 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 DOCK3Q8IZD9 2030 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 HELZP42694 1942 aaKnown RBP11□□□□□ -0.65
SPIDR-217ENST00000522117 A0A0B4J2A0 478 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 TEX13DA0A0J9YY54 714 aaPredicted RBP11□□□□□ -0.65
SPIDR-217ENST00000522117 BLACEA4D250 179 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 ZNF587BE7ETH6 402 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 HIST1H2BKO60814 126 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 ITGB2P05107 769 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 HIST1H2BJP06899 126 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 FABP4P15090 132 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 HIST1H2BOP23527 126 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 HIST1H2BBP33778 126 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 PNLIPRP1P54315 467 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 HIST1H2BDP58876 126 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 HIST1H2BCP62807 126 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 SKP1P63208 163 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 MC1RQ01726 317 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 HIST2H2BEQ16778 126 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 PNLIPRP3Q17RR3 467 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 ISXQ2M1V0 245 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 HIST2H2BFQ5QNW6 126 aaPredicted RBP11□□□□□ -0.65
SPIDR-217ENST00000522117 MRM1Q6IN84 353 aaKnown RBP11□□□□□ -0.65
SPIDR-217ENST00000522117 PWWP2BQ6NUJ5 590 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 OR4K14Q8NGD5 310 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 AUTS2Q8WXX7 1259 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 HIST1H2BHQ93079 126 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 MR1Q95460 341 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 S100A16Q96FQ6 103 aaKnown RBP11□□□□□ -0.65
SPIDR-217ENST00000522117 HIST1H2BNQ99877 126 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 HIST1H2BMQ99879 126 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 RIOK2Q9BVS4 552 aaKnown RBP11□□□□□ -0.65
SPIDR-217ENST00000522117 KLK14Q9P0G3 267 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 OR14J1Q9UGF5 321 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 SHPKQ9UHJ6 478 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 ST6GALNAC2Q9UJ37 374 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 PLXNA3P51805 1871 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 A0A087WUU8 490 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 ELOA3CA0A087WX78 387 aaPredicted RBP11□□□□□ -0.65
SPIDR-217ENST00000522117 H7C417 338 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 J3QLW9 94 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 PPP1R2P9O14990 202 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 HBP1O60381 514 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 PRAMEF11O60813 436 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 CHRM4P08173 479 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 ZNF19P17023 458 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 CSNK1DP48730 415 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 CDC34P49427 236 aaPredicted RBP11□□□□□ -0.65
SPIDR-217ENST00000522117 CLDN12P56749 244 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 OR12D2P58182 307 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 DCAF10Q5QP82 559 aa11□□□□□ -0.65
SPIDR-217ENST00000522117 FAM46CQ5VWP2 391 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms