RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 C3orf14Q9HBI5 128 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 ZNF160Q9HCG1 818 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 SAR1AQ9NR31 198 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 ATAD3AQ9NVI7 634 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.81□□□□□ -1.96
VPS13B-209ENST00000521559 FAM120CQ9NX05 1096 aaKnown RBP2.81□□□□□ -1.96
VPS13B-209ENST00000521559 MAT2BQ9NZL9 334 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 COPS7AQ9UBW8 275 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 PRODH2Q9UF12 536 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 ZNF639Q9UID6 485 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 BTNL2Q9UIR0 455 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 ERVK-19Q9WJR5 959 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 ENTPD4Q9Y227 616 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 CFL2Q9Y281 166 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 ARL2BPQ9Y2Y0 163 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 GRIP1Q9Y3R0 1128 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 COL27A1Q8IZC6 1860 aaPredicted RBP2.81□□□□□ -1.96
VPS13B-209ENST00000521559 RALGAPA1Q6GYQ0 2036 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 RP1P56715 2156 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 NOTCH3Q9UM47 2321 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 CEP250Q9BV73 2442 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 A0A096LPI6 279 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 C2orf92A0A1B0GVN3 265 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 A0A1W2PP18 115 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 NDUFAF8A1L188 74 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 ELOVL7A1L3X0 281 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 OR2M5A3KFT3 312 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 A8MUI8 341 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 C9JVG2 144 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 MKRN2OSH3BPM6 223 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 UPK1AO00322 258 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 UBE2CO00762 179 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 SLC22A2O15244 555 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 EMC8O43402 210 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 PSMG1O95456 288 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 CPSF4O95639 269 aaKnown RBP2.8□□□□□ -1.96
VPS13B-209ENST00000521559 C6orf47O95873 294 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 CLPTM1O96005 669 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 CLPSP04118 112 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 ALPPP05187 535 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 CT62P0C5K7 136 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 ZCCHC18P0CG32 403 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 SFTPCP11686 197 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 CD1EP15812 388 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 EFNA1P20827 205 aaPredicted RBP2.8□□□□□ -1.96
VPS13B-209ENST00000521559 UQCRC2P22695 453 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 EPHA2P29317 976 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 MAGEA8P43361 318 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 PPICP45877 212 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 TRPC1P48995 793 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 CCT3P49368 545 aaKnown RBP2.8□□□□□ -1.96
VPS13B-209ENST00000521559 EMDP50402 254 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 CDK9P50750 372 aaKnown RBP2.8□□□□□ -1.96
VPS13B-209ENST00000521559 MMP15P51511 669 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 PPP5CP53041 499 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 KCNK10P57789 538 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 MLF1P58340 268 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 HBA1P69905 142 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 HSPB3Q12988 150 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 SNTB1Q13884 538 aaKnown RBP2.8□□□□□ -1.96
VPS13B-209ENST00000521559 RCAN2Q14206 197 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 MELKQ14680 651 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 EXOSC7Q15024 291 aaKnown RBP2.8□□□□□ -1.96
VPS13B-209ENST00000521559 MAPRE2Q15555 327 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 LINC00303Q3SY05 128 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 VPS26BQ4G0F5 336 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 TRMT12Q53H54 448 aaKnown RBP2.8□□□□□ -1.96
VPS13B-209ENST00000521559 ACER2Q5QJU3 275 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 AGAP7PQ5VUJ5 663 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 ZCCHC12Q6PEW1 402 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 BHLHB9Q6PI77 547 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 IGFL2Q6UWQ7 119 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 TMEM107Q6UX40 140 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 IGFL3Q6UXB1 125 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 ISLR2Q6UXK2 745 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 TMEM64Q6YI46 380 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 ZNF621Q6ZSS3 439 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 C6orf120Q7Z4R8 191 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 ANKRD46Q86W74 232 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 RPS19BP1Q86WX3 136 aaKnown RBP2.8□□□□□ -1.96
VPS13B-209ENST00000521559 HPS6Q86YV9 775 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 CLECL1Q8IZS7 167 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 OR2L13Q8N349 312 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 APCDD1LQ8NCL9 501 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 CCDC197Q8NCU1 140 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 MAPK1IP1LQ8NDC0 245 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 PAPD5Q8NDF8 572 aaKnown RBP2.8□□□□□ -1.96
VPS13B-209ENST00000521559 C17orf47Q8NEP4 570 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 FDCSPQ8NFU4 85 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 TSPAN14Q8NG11 270 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 OR2T12Q8NG77 320 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 OR7G2Q8NG99 324 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 OR52R1Q8NGF1 315 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 OR9I1Q8NGQ6 314 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 GOT1L1Q8NHS2 421 aaPredicted RBP2.8□□□□□ -1.96
VPS13B-209ENST00000521559 SFXN5Q8TD22 340 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 MRGPRDQ8TDS7 321 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 HAS2Q92819 552 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 ADIPOR1Q96A54 375 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 VPS33AQ96AX1 596 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms