RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 ZNF229Q9UJW7 825 aa13.68□□□□□ -0.22
CLN8-205ENST00000520991 ENTPD5O75356 428 aa13.67□□□□□ -0.22
CLN8-205ENST00000520991 SASH3O75995 380 aa13.67□□□□□ -0.22
CLN8-205ENST00000520991 FAM157CP0CG43 387 aa13.67□□□□□ -0.22
CLN8-205ENST00000520991 DAOP14920 347 aa13.67□□□□□ -0.22
CLN8-205ENST00000520991 ZNF14P17017 642 aaPredicted RBP13.67□□□□□ -0.22
CLN8-205ENST00000520991 NR4A1P22736 598 aa13.67□□□□□ -0.22
CLN8-205ENST00000520991 GIPRP48546 466 aa13.67□□□□□ -0.22
CLN8-205ENST00000520991 GZMMP51124 257 aa13.67□□□□□ -0.22
CLN8-205ENST00000520991 RAB1AP62820 205 aa13.67□□□□□ -0.22
CLN8-205ENST00000520991 GALK2Q01415 458 aa13.67□□□□□ -0.22
CLN8-205ENST00000520991 ZP4Q12836 540 aa13.67□□□□□ -0.22
CLN8-205ENST00000520991 MELKQ14680 651 aa13.67□□□□□ -0.22
CLN8-205ENST00000520991 GKAP1Q5VSY0 366 aaPredicted RBP13.67□□□□□ -0.22
CLN8-205ENST00000520991 CCDC80Q76M96 950 aa13.67□□□□□ -0.22
CLN8-205ENST00000520991 PIWIL3Q7Z3Z3 882 aaKnown RBP13.67□□□□□ -0.22
CLN8-205ENST00000520991 TSPYL5Q86VY4 417 aaPredicted RBP13.67□□□□□ -0.22
CLN8-205ENST00000520991 CARM1Q86X55 608 aa13.67□□□□□ -0.22
CLN8-205ENST00000520991 CDK20Q8IZL9 346 aa13.67□□□□□ -0.22
CLN8-205ENST00000520991 ZCCHC24Q8N2G6 241 aaKnown RBP13.67□□□□□ -0.22
CLN8-205ENST00000520991 LRRC17Q8N6Y2 441 aa13.67□□□□□ -0.22
CLN8-205ENST00000520991 OR8J3Q8NGG0 315 aa13.67□□□□□ -0.22
CLN8-205ENST00000520991 TMEM54Q969K7 222 aa13.67□□□□□ -0.22
CLN8-205ENST00000520991 LRRC58Q96CX6 371 aa13.67□□□□□ -0.22
CLN8-205ENST00000520991 SLC25A44Q96H78 314 aaPredicted RBP13.67□□□□□ -0.22
CLN8-205ENST00000520991 ZNF426Q9BUY5 554 aa13.67□□□□□ -0.22
CLN8-205ENST00000520991 BPESC1Q9GZL8 116 aa13.67□□□□□ -0.22
CLN8-205ENST00000520991 DENND2DQ9H6A0 471 aaPredicted RBP13.67□□□□□ -0.22
CLN8-205ENST00000520991 TMEM160Q9NX00 188 aa13.67□□□□□ -0.22
CLN8-205ENST00000520991 TAS2R5Q9NYW4 299 aa13.67□□□□□ -0.22
CLN8-205ENST00000520991 GLTPQ9NZD2 209 aa13.67□□□□□ -0.22
CLN8-205ENST00000520991 LPAR3Q9UBY5 353 aa13.67□□□□□ -0.22
CLN8-205ENST00000520991 FBXL3Q9UKT7 428 aa13.67□□□□□ -0.22
CLN8-205ENST00000520991 BAG5Q9UL15 447 aa13.67□□□□□ -0.22
CLN8-205ENST00000520991 SH3GLB1Q9Y371 365 aa13.67□□□□□ -0.22
CLN8-205ENST00000520991 IGHV4-61A0A0C4DH41 118 aa13.66□□□□□ -0.22
CLN8-205ENST00000520991 BBIP1A8MTZ0 92 aa13.66□□□□□ -0.22
CLN8-205ENST00000520991 BLOC1S5-TXNDC5H3BN57 136 aa13.66□□□□□ -0.22
CLN8-205ENST00000520991 MRASO14807 208 aa13.66□□□□□ -0.22
CLN8-205ENST00000520991 LMX1BO60663 402 aa13.66□□□□□ -0.22
CLN8-205ENST00000520991 LSP1P33241 339 aa13.66□□□□□ -0.22
CLN8-205ENST00000520991 ARFIP2P53365 341 aa13.66□□□□□ -0.22
CLN8-205ENST00000520991 CRYBA2P53672 197 aa13.66□□□□□ -0.22
CLN8-205ENST00000520991 TAS2R41P59536 307 aa13.66□□□□□ -0.22
CLN8-205ENST00000520991 SF3A3Q12874 501 aaKnown RBP eCLIP13.66□□□□□ -0.22
CLN8-205ENST00000520991 MAPRE2Q15555 327 aa13.66□□□□□ -0.22
CLN8-205ENST00000520991 COQ5Q5HYK3 327 aa13.66□□□□□ -0.22
CLN8-205ENST00000520991 REP15Q6BDI9 236 aa13.66□□□□□ -0.22
CLN8-205ENST00000520991 FAM166AQ6J272 317 aa13.66□□□□□ -0.22
CLN8-205ENST00000520991 DEF8Q6ZN54 512 aa13.66□□□□□ -0.22
CLN8-205ENST00000520991 SHARPINQ9H0F6 387 aa13.66□□□□□ -0.22
CLN8-205ENST00000520991 CHODLQ9H9P2 273 aa13.66□□□□□ -0.22
CLN8-205ENST00000520991 ZNF224Q9NZL3 707 aa13.66□□□□□ -0.22
CLN8-205ENST00000520991 KCNS2Q9ULS6 477 aa13.66□□□□□ -0.22
CLN8-205ENST00000520991 LOC100289279A0A1B0GTE1 492 aa13.65□□□□□ -0.22
CLN8-205ENST00000520991 TMEM129A0AVI4 362 aa13.65□□□□□ -0.22
CLN8-205ENST00000520991 RNF212BA8MTL3 300 aa13.65□□□□□ -0.22
CLN8-205ENST00000520991 MCIDASD6RGH6 385 aa13.65□□□□□ -0.22
CLN8-205ENST00000520991 FXYD1O00168 92 aa13.65□□□□□ -0.22
CLN8-205ENST00000520991 FARS2O95363 451 aaKnown RBP13.65□□□□□ -0.22
CLN8-205ENST00000520991 STAMBPO95630 424 aa13.65□□□□□ -0.22
CLN8-205ENST00000520991 BCL10O95999 233 aa13.65□□□□□ -0.22
CLN8-205ENST00000520991 NPPAP01160 153 aa13.65□□□□□ -0.22
CLN8-205ENST00000520991 IGHG1P01857 330 aa13.65□□□□□ -0.22
CLN8-205ENST00000520991 ADRA2AP08913 450 aa13.65□□□□□ -0.22
CLN8-205ENST00000520991 ASAH2BP0C7U1 165 aa13.65□□□□□ -0.22
CLN8-205ENST00000520991 ZNF35P13682 527 aa13.65□□□□□ -0.22
CLN8-205ENST00000520991 TNFRSF1BP20333 461 aa13.65□□□□□ -0.22
CLN8-205ENST00000520991 CLRN1P58418 232 aa13.65□□□□□ -0.22
CLN8-205ENST00000520991 RPS23P62266 143 aaKnown RBP13.65□□□□□ -0.22
CLN8-205ENST00000520991 KLF10Q13118 480 aa13.65□□□□□ -0.22
CLN8-205ENST00000520991 RAB39AQ14964 217 aa13.65□□□□□ -0.22
CLN8-205ENST00000520991 ERICH5Q6P6B1 374 aa13.65□□□□□ -0.22
CLN8-205ENST00000520991 CALHM3Q86XJ0 350 aa13.65□□□□□ -0.22
CLN8-205ENST00000520991 SKA3Q8IX90 412 aa13.65□□□□□ -0.22
CLN8-205ENST00000520991 SLC22A24Q8N4F4 322 aa13.65□□□□□ -0.22
CLN8-205ENST00000520991 SPATA3Q8NHX4 192 aa13.65□□□□□ -0.22
CLN8-205ENST00000520991 MRPL24Q96A35 216 aaKnown RBP13.65□□□□□ -0.22
CLN8-205ENST00000520991 ZNF75AQ96N20 296 aa13.65□□□□□ -0.22
CLN8-205ENST00000520991 PRSS27Q9BQR3 290 aa13.65□□□□□ -0.22
CLN8-205ENST00000520991 TPK1Q9H3S4 243 aa13.65□□□□□ -0.22
CLN8-205ENST00000520991 FGFR1OP2Q9NVK5 253 aa13.65□□□□□ -0.22
CLN8-205ENST00000520991 MXRA5Q9NR99 2828 aa13.65□□□□□ -0.22
CLN8-205ENST00000520991 YLPM1P49750 1951 aaKnown RBP13.65□□□□□ -0.22
CLN8-205ENST00000520991 COL6A5A8TX70 2615 aa13.65□□□□□ -0.22
CLN8-205ENST00000520991 A0A1W2PRG6 482 aa13.64□□□□□ -0.23
CLN8-205ENST00000520991 M0R233 179 aa13.64□□□□□ -0.23
CLN8-205ENST00000520991 SHOX2O60902 331 aaPredicted RBP13.64□□□□□ -0.23
CLN8-205ENST00000520991 IFNA14P01570 189 aa13.64□□□□□ -0.23
CLN8-205ENST00000520991 MT-ND1P03886 318 aa13.64□□□□□ -0.23
CLN8-205ENST00000520991 PATE4P0C8F1 98 aa13.64□□□□□ -0.23
CLN8-205ENST00000520991 PGA4P0DJD7 388 aa13.64□□□□□ -0.23
CLN8-205ENST00000520991 PGA3P0DJD8 388 aa13.64□□□□□ -0.23
CLN8-205ENST00000520991 OR8G3PP0DMU2 310 aa13.64□□□□□ -0.23
CLN8-205ENST00000520991 ZNF23P17027 643 aa13.64□□□□□ -0.23
CLN8-205ENST00000520991 GLRXP35754 106 aa13.64□□□□□ -0.23
CLN8-205ENST00000520991 RBM34P42696 430 aaKnown RBP13.64□□□□□ -0.23
CLN8-205ENST00000520991 PCYOX1LQ8NBM8 494 aa13.64□□□□□ -0.23
CLN8-205ENST00000520991 PFN4Q8NHR9 129 aa13.64□□□□□ -0.23
CLN8-205ENST00000520991 UBASH3BQ8TF42 649 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms