RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 ABCA7Q8IZY2 2146 aa3.04□□□□□ -1.92
SQLE-204ENST00000520493 ATRXP46100 2492 aa3.03□□□□□ -1.92
SQLE-204ENST00000520493 IGLV8-61A0A075B6I0 122 aa3.03□□□□□ -1.92
SQLE-204ENST00000520493 IGHV7-81A0A0B4J1V7 117 aa3.03□□□□□ -1.92
SQLE-204ENST00000520493 TMEM120BA0PK00 339 aa3.03□□□□□ -1.92
SQLE-204ENST00000520493 SRRM5B3KS81 715 aa3.03□□□□□ -1.92
SQLE-204ENST00000520493 K7ERQ8 282 aa3.03□□□□□ -1.92
SQLE-204ENST00000520493 MRPS12O15235 138 aaKnown RBP3.03□□□□□ -1.92
SQLE-204ENST00000520493 KDELR3O43731 214 aa3.03□□□□□ -1.92
SQLE-204ENST00000520493 AIREO43918 545 aa3.03□□□□□ -1.92
SQLE-204ENST00000520493 EIF4E2O60573 245 aaKnown RBP3.03□□□□□ -1.92
SQLE-204ENST00000520493 ZNF354AO60765 605 aaPredicted RBP3.03□□□□□ -1.92
SQLE-204ENST00000520493 HLA-HP01893 362 aa3.03□□□□□ -1.92
SQLE-204ENST00000520493 APOA1P02647 267 aa3.03□□□□□ -1.92
SQLE-204ENST00000520493 KLK3P07288 261 aaPredicted RBP3.03□□□□□ -1.92
SQLE-204ENST00000520493 CMA1P23946 247 aa3.03□□□□□ -1.92
SQLE-204ENST00000520493 SHMT2P34897 504 aa3.03□□□□□ -1.92
SQLE-204ENST00000520493 UGT1A3P35503 534 aa3.03□□□□□ -1.92
SQLE-204ENST00000520493 KIR2DS4P43632 304 aa3.03□□□□□ -1.92
SQLE-204ENST00000520493 MEOX2P50222 304 aa3.03□□□□□ -1.92
SQLE-204ENST00000520493 IST1P53990 364 aa3.03□□□□□ -1.92
SQLE-204ENST00000520493 ADARB1P78563 741 aaKnown RBP3.03□□□□□ -1.92
SQLE-204ENST00000520493 SF3A2Q15428 464 aaKnown RBP3.03□□□□□ -1.92
SQLE-204ENST00000520493 AANATQ16613 207 aa3.03□□□□□ -1.92
SQLE-204ENST00000520493 SLC22A6Q4U2R8 563 aa3.03□□□□□ -1.92
SQLE-204ENST00000520493 PAGE2BQ5JRK9 111 aa3.03□□□□□ -1.92
SQLE-204ENST00000520493 PPM1LQ5SGD2 360 aa3.03□□□□□ -1.92
SQLE-204ENST00000520493 VAX1Q5SQQ9 334 aa3.03□□□□□ -1.92
SQLE-204ENST00000520493 CGB2Q6NT52 195 aa3.03□□□□□ -1.92
SQLE-204ENST00000520493 PAMR1Q6UXH9 720 aa3.03□□□□□ -1.92
SQLE-204ENST00000520493 ARCQ7LC44 396 aa3.03□□□□□ -1.92
SQLE-204ENST00000520493 MRPL21Q7Z2W9 205 aaKnown RBP3.03□□□□□ -1.92
SQLE-204ENST00000520493 TMEM135Q86UB9 458 aa3.03□□□□□ -1.92
SQLE-204ENST00000520493 ZNF584Q8IVC4 421 aa3.03□□□□□ -1.92
SQLE-204ENST00000520493 OR13C9Q8NGT0 318 aa3.03□□□□□ -1.92
SQLE-204ENST00000520493 TMIGD2Q96BF3 282 aa3.03□□□□□ -1.92
SQLE-204ENST00000520493 ATP6V1G3Q96LB4 118 aa3.03□□□□□ -1.92
SQLE-204ENST00000520493 CSPG4P5Q96PW8 444 aa3.03□□□□□ -1.92
SQLE-204ENST00000520493 KIR2DL4Q99706 377 aa3.03□□□□□ -1.92
SQLE-204ENST00000520493 ZYG11BQ9C0D3 744 aa3.03□□□□□ -1.92
SQLE-204ENST00000520493 GBA3Q9H227 469 aa3.03□□□□□ -1.92
SQLE-204ENST00000520493 GAL3ST2Q9H3Q3 398 aa3.03□□□□□ -1.92
SQLE-204ENST00000520493 ADAP2Q9NPF8 381 aa3.03□□□□□ -1.92
SQLE-204ENST00000520493 DYRK4Q9NR20 520 aa3.03□□□□□ -1.92
SQLE-204ENST00000520493 MYEF2Q9P2K5 600 aaKnown RBP3.03□□□□□ -1.92
SQLE-204ENST00000520493 B4GALT7Q9UBV7 327 aa3.03□□□□□ -1.92
SQLE-204ENST00000520493 LSM7Q9UK45 103 aaKnown RBP3.03□□□□□ -1.92
SQLE-204ENST00000520493 KMT2BQ9UMN6 2715 aaPredicted RBP3.02□□□□□ -1.93
SQLE-204ENST00000520493 MAP3K19Q56UN5 1328 aa3.02□□□□□ -1.93
SQLE-204ENST00000520493 TRAV6A0A075B6T7 132 aa3.02□□□□□ -1.93
SQLE-204ENST00000520493 IGHV1OR15-1A0A075B7D0 117 aa3.02□□□□□ -1.93
SQLE-204ENST00000520493 IGKV1D-8A0A087WSZ0 117 aa3.02□□□□□ -1.93
SQLE-204ENST00000520493 ZNF99A8MXY4 864 aaPredicted RBP3.02□□□□□ -1.93
SQLE-204ENST00000520493 HSBP1L1C9JCN9 74 aa3.02□□□□□ -1.93
SQLE-204ENST00000520493 CDC7O00311 574 aa3.02□□□□□ -1.93
SQLE-204ENST00000520493 PHF1O43189 567 aaPredicted RBP3.02□□□□□ -1.93
SQLE-204ENST00000520493 MGRN1O60291 552 aa3.02□□□□□ -1.93
SQLE-204ENST00000520493 NMT2O60551 498 aa3.02□□□□□ -1.93
SQLE-204ENST00000520493 EEDO75530 441 aaKnown RBP3.02□□□□□ -1.93
SQLE-204ENST00000520493 LYPLA1O75608 230 aaPredicted RBP3.02□□□□□ -1.93
SQLE-204ENST00000520493 FCN3O75636 299 aa3.02□□□□□ -1.93
SQLE-204ENST00000520493 SERF1AO75920 110 aa3.02□□□□□ -1.93
SQLE-204ENST00000520493 CCNB2O95067 398 aa3.02□□□□□ -1.93
SQLE-204ENST00000520493 SEMG1P04279 462 aa3.02□□□□□ -1.93
SQLE-204ENST00000520493 CLTAP09496 248 aa3.02□□□□□ -1.93
SQLE-204ENST00000520493 SLC35E2P0CK97 266 aa3.02□□□□□ -1.93
SQLE-204ENST00000520493 VDAC1P21796 283 aa3.02□□□□□ -1.93
SQLE-204ENST00000520493 FASP25445 335 aa3.02□□□□□ -1.93
SQLE-204ENST00000520493 RORAP35398 523 aa3.02□□□□□ -1.93
SQLE-204ENST00000520493 UGT2B15P54855 530 aa3.02□□□□□ -1.93
SQLE-204ENST00000520493 CDH17Q12864 832 aa3.02□□□□□ -1.93
SQLE-204ENST00000520493 ZNF829Q3KNS6 432 aaPredicted RBP3.02□□□□□ -1.93
SQLE-204ENST00000520493 MARCH8Q5T0T0 291 aa3.02□□□□□ -1.93
SQLE-204ENST00000520493 ATAD3CQ5T2N8 411 aa3.02□□□□□ -1.93
SQLE-204ENST00000520493 SLC25A25Q6KCM7 469 aa3.02□□□□□ -1.93
SQLE-204ENST00000520493 CXCL17Q6UXB2 119 aa3.02□□□□□ -1.93
SQLE-204ENST00000520493 ASCL5Q7RTU5 278 aa3.02□□□□□ -1.93
SQLE-204ENST00000520493 GPR65Q8IYL9 337 aa3.02□□□□□ -1.93
SQLE-204ENST00000520493 CMTM8Q8IZV2 173 aa3.02□□□□□ -1.93
SQLE-204ENST00000520493 RDH10Q8IZV5 341 aa3.02□□□□□ -1.93
SQLE-204ENST00000520493 PDIK1LQ8N165 341 aa3.02□□□□□ -1.93
SQLE-204ENST00000520493 ACOT4Q8N9L9 421 aa3.02□□□□□ -1.93
SQLE-204ENST00000520493 INO80EQ8NBZ0 244 aaPredicted RBP3.02□□□□□ -1.93
SQLE-204ENST00000520493 OR2G2Q8NGZ5 317 aa3.02□□□□□ -1.93
SQLE-204ENST00000520493 OR52E5Q8NH55 327 aa3.02□□□□□ -1.93
SQLE-204ENST00000520493 FGF11Q92914 225 aa3.02□□□□□ -1.93
SQLE-204ENST00000520493 SMARCD2Q92925 531 aa3.02□□□□□ -1.93
SQLE-204ENST00000520493 CMTM7Q96FZ5 175 aa3.02□□□□□ -1.93
SQLE-204ENST00000520493 ITCHQ96J02 903 aa3.02□□□□□ -1.93
SQLE-204ENST00000520493 TMEM246Q9BRR3 403 aa3.02□□□□□ -1.93
SQLE-204ENST00000520493 ACTR3CQ9C0K3 210 aaPredicted RBP3.02□□□□□ -1.93
SQLE-204ENST00000520493 ROGDIQ9GZN7 287 aa3.02□□□□□ -1.93
SQLE-204ENST00000520493 MRPL47Q9HD33 250 aaKnown RBP3.02□□□□□ -1.93
SQLE-204ENST00000520493 SAMSN1Q9NSI8 373 aaKnown RBP3.02□□□□□ -1.93
SQLE-204ENST00000520493 ZNHIT6Q9NWK9 470 aaKnown RBP3.02□□□□□ -1.93
SQLE-204ENST00000520493 ABCD2Q9UBJ2 740 aa3.02□□□□□ -1.93
SQLE-204ENST00000520493 GON4LQ3T8J9 2241 aa3.01□□□□□ -1.93
SQLE-204ENST00000520493 A0A1W2PNU3 283 aaPredicted RBP3.01□□□□□ -1.93
SQLE-204ENST00000520493 C12orf71A8MTZ7 269 aa3.01□□□□□ -1.93
SQLE-204ENST00000520493 KLLNB2CW77 178 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms