RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 C2orf66Q6UXQ4 117 aa5.69□□□□□ -1.5
LSM1-202ENST00000520286 ECHDC2Q86YB7 292 aa5.69□□□□□ -1.5
LSM1-202ENST00000520286 ERO1BQ86YB8 467 aa5.69□□□□□ -1.5
LSM1-202ENST00000520286 OR2L13Q8N349 312 aa5.69□□□□□ -1.5
LSM1-202ENST00000520286 FAM83FQ8NEG4 500 aaPredicted RBP5.69□□□□□ -1.5
LSM1-202ENST00000520286 ERMNQ8TAM6 284 aa5.69□□□□□ -1.5
LSM1-202ENST00000520286 SLC2A14Q8TDB8 520 aa5.69□□□□□ -1.5
LSM1-202ENST00000520286 NAT14Q8WUY8 206 aa5.69□□□□□ -1.5
LSM1-202ENST00000520286 RASD2Q96D21 266 aa5.69□□□□□ -1.5
LSM1-202ENST00000520286 CNOT6LQ96LI5 555 aaKnown RBP5.69□□□□□ -1.5
LSM1-202ENST00000520286 SELENOSQ9BQE4 189 aa5.69□□□□□ -1.5
LSM1-202ENST00000520286 CENPKQ9BS16 269 aa5.69□□□□□ -1.5
LSM1-202ENST00000520286 AZI2Q9H6S1 392 aa5.69□□□□□ -1.5
LSM1-202ENST00000520286 CD209Q9NNX6 404 aa5.69□□□□□ -1.5
LSM1-202ENST00000520286 FGFR1OP2Q9NVK5 253 aa5.69□□□□□ -1.5
LSM1-202ENST00000520286 B3GNT2Q9NY97 397 aa5.69□□□□□ -1.5
LSM1-202ENST00000520286 PAK5Q9P286 719 aa5.69□□□□□ -1.5
LSM1-202ENST00000520286 PHF11Q9UIL8 331 aa5.69□□□□□ -1.5
LSM1-202ENST00000520286 COL1A1P02452 1464 aaPredicted RBP5.69□□□□□ -1.5
LSM1-202ENST00000520286 COL4A1P02462 1669 aa5.69□□□□□ -1.5
LSM1-202ENST00000520286 BRCA2P51587 3418 aa5.68□□□□□ -1.5
LSM1-202ENST00000520286 VSTM2BA6NLU5 285 aa5.68□□□□□ -1.5
LSM1-202ENST00000520286 ZNF189O75820 626 aaPredicted RBP5.68□□□□□ -1.5
LSM1-202ENST00000520286 PCCAP05165 728 aaPredicted RBP5.68□□□□□ -1.5
LSM1-202ENST00000520286 SHC1P29353 583 aa5.68□□□□□ -1.5
LSM1-202ENST00000520286 LEPP41159 167 aa5.68□□□□□ -1.5
LSM1-202ENST00000520286 CD47Q08722 323 aa5.68□□□□□ -1.5
LSM1-202ENST00000520286 DMRTC1Q5HYR2 192 aa5.68□□□□□ -1.5
LSM1-202ENST00000520286 C6orf226Q5I0X4 101 aa5.68□□□□□ -1.5
LSM1-202ENST00000520286 C1orf220Q5T0J3 134 aa5.68□□□□□ -1.5
LSM1-202ENST00000520286 SLC22A10Q63ZE4 541 aa5.68□□□□□ -1.5
LSM1-202ENST00000520286 LRRC74BQ6ZQY2 392 aa5.68□□□□□ -1.5
LSM1-202ENST00000520286 SERINC5Q86VE9 423 aa5.68□□□□□ -1.5
LSM1-202ENST00000520286 CDR2LQ86X02 465 aaPredicted RBP5.68□□□□□ -1.5
LSM1-202ENST00000520286 ALLCQ8N6M5 410 aa5.68□□□□□ -1.5
LSM1-202ENST00000520286 UBE2E3Q969T4 207 aa5.68□□□□□ -1.5
LSM1-202ENST00000520286 FMO2Q99518 471 aa5.68□□□□□ -1.5
LSM1-202ENST00000520286 RAB34Q9BZG1 259 aa5.68□□□□□ -1.5
LSM1-202ENST00000520286 BLZF1Q9H2G9 400 aa5.68□□□□□ -1.5
LSM1-202ENST00000520286 INIPQ9NRY2 104 aa5.68□□□□□ -1.5
LSM1-202ENST00000520286 STX18Q9P2W9 335 aaKnown RBP5.68□□□□□ -1.5
LSM1-202ENST00000520286 PAIP2BQ9ULR5 123 aaKnown RBP5.68□□□□□ -1.5
LSM1-202ENST00000520286 ZNF705EA8MWA4 302 aaPredicted RBP5.67□□□□□ -1.5
LSM1-202ENST00000520286 SRRM5B3KS81 715 aa5.67□□□□□ -1.5
LSM1-202ENST00000520286 TCP11X1B4DZS4 312 aa5.67□□□□□ -1.5
LSM1-202ENST00000520286 TRDCB7Z8K6 153 aa5.67□□□□□ -1.5
LSM1-202ENST00000520286 GOLGA8SH3BPF8 625 aa5.67□□□□□ -1.5
LSM1-202ENST00000520286 CETN3O15182 167 aa5.67□□□□□ -1.5
LSM1-202ENST00000520286 HCN1O60741 890 aa5.67□□□□□ -1.5
LSM1-202ENST00000520286 CIAO1O76071 339 aa5.67□□□□□ -1.5
LSM1-202ENST00000520286 NDUFB10O96000 172 aa5.67□□□□□ -1.5
LSM1-202ENST00000520286 RNH1P13489 461 aaKnown RBP5.67□□□□□ -1.5
LSM1-202ENST00000520286 ANXA13P27216 316 aa5.67□□□□□ -1.5
LSM1-202ENST00000520286 FKBP1AP62942 108 aaKnown RBP5.67□□□□□ -1.5
LSM1-202ENST00000520286 OGDHQ02218 1023 aa5.67□□□□□ -1.5
LSM1-202ENST00000520286 ASAH1Q13510 395 aa5.67□□□□□ -1.5
LSM1-202ENST00000520286 OR5M10Q6IEU7 315 aa5.67□□□□□ -1.5
LSM1-202ENST00000520286 TRIM69Q86WT6 500 aa5.67□□□□□ -1.5
LSM1-202ENST00000520286 CCDC65Q8IXS2 484 aa5.67□□□□□ -1.5
LSM1-202ENST00000520286 GPR65Q8IYL9 337 aa5.67□□□□□ -1.5
LSM1-202ENST00000520286 METTL13Q8N6R0 699 aa5.67□□□□□ -1.5
LSM1-202ENST00000520286 MAPK1IP1LQ8NDC0 245 aa5.67□□□□□ -1.5
LSM1-202ENST00000520286 MAGEE2Q8TD90 523 aaPredicted RBP5.67□□□□□ -1.5
LSM1-202ENST00000520286 MAGEB18Q96M61 343 aa5.67□□□□□ -1.5
LSM1-202ENST00000520286 NOL4LQ96MY1 436 aaPredicted RBP5.67□□□□□ -1.5
LSM1-202ENST00000520286 CLCC1Q96S66 551 aa5.67□□□□□ -1.5
LSM1-202ENST00000520286 ZNF184Q99676 751 aaPredicted RBP5.67□□□□□ -1.5
LSM1-202ENST00000520286 TRIM62Q9BVG3 475 aa5.67□□□□□ -1.5
LSM1-202ENST00000520286 CHIAQ9BZP6 476 aa5.67□□□□□ -1.5
LSM1-202ENST00000520286 TDRD3Q9H7E2 651 aaKnown RBP5.67□□□□□ -1.5
LSM1-202ENST00000520286 SAR1AQ9NR31 198 aa5.67□□□□□ -1.5
LSM1-202ENST00000520286 FAIMQ9NVQ4 179 aa5.67□□□□□ -1.5
LSM1-202ENST00000520286 RABL2AQ9UBK7 228 aaPredicted RBP5.67□□□□□ -1.5
LSM1-202ENST00000520286 NUP98P52948 1817 aa5.67□□□□□ -1.5
LSM1-202ENST00000520286 LRRC37AA6NMS7 1700 aa5.66□□□□□ -1.5
LSM1-202ENST00000520286 SCN9AQ15858 1988 aa5.66□□□□□ -1.5
LSM1-202ENST00000520286 A0A1B0GWB2 263 aa5.66□□□□□ -1.5
LSM1-202ENST00000520286 DHRS7CA6NNS2 312 aa5.66□□□□□ -1.5
LSM1-202ENST00000520286 E9PBE3 544 aa5.66□□□□□ -1.5
LSM1-202ENST00000520286 CDX4O14627 284 aaPredicted RBP5.66□□□□□ -1.5
LSM1-202ENST00000520286 PFDN1O60925 122 aa5.66□□□□□ -1.5
LSM1-202ENST00000520286 DCTN3O75935 186 aa5.66□□□□□ -1.5
LSM1-202ENST00000520286 PSMG1O95456 288 aa5.66□□□□□ -1.5
LSM1-202ENST00000520286 TROVE2P10155 538 aaKnown RBP eCLIP5.66□□□□□ -1.5
LSM1-202ENST00000520286 ETS2P15036 469 aa5.66□□□□□ -1.5
LSM1-202ENST00000520286 LONP1P36776 959 aaKnown RBP5.66□□□□□ -1.5
LSM1-202ENST00000520286 QARSP47897 775 aaKnown RBP5.66□□□□□ -1.5
LSM1-202ENST00000520286 TPMTP51580 245 aa5.66□□□□□ -1.5
LSM1-202ENST00000520286 CXCL6P80162 114 aa5.66□□□□□ -1.5
LSM1-202ENST00000520286 PPIL2Q13356 520 aa5.66□□□□□ -1.5
LSM1-202ENST00000520286 PLD1Q13393 1074 aa5.66□□□□□ -1.5
LSM1-202ENST00000520286 IL17AQ16552 155 aa5.66□□□□□ -1.5
LSM1-202ENST00000520286 KLHL38Q2WGJ6 581 aa5.66□□□□□ -1.5
LSM1-202ENST00000520286 TIMM50Q3ZCQ8 353 aa5.66□□□□□ -1.5
LSM1-202ENST00000520286 EIPR1Q53HC9 387 aa5.66□□□□□ -1.5
LSM1-202ENST00000520286 PAN3Q58A45 887 aaKnown RBP5.66□□□□□ -1.5
LSM1-202ENST00000520286 UTS2BQ765I0 119 aa5.66□□□□□ -1.5
LSM1-202ENST00000520286 H2BFWTQ7Z2G1 175 aa5.66□□□□□ -1.5
LSM1-202ENST00000520286 SPATA24Q86W54 205 aa5.66□□□□□ -1.5
LSM1-202ENST00000520286 BBS5Q8N3I7 341 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms