RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 LMAN1LQ9HAT1 526 aa12.37□□□□□ -0.43
PABPC1-208ENST00000519004 CMC2Q9NRP2 79 aa12.37□□□□□ -0.43
PABPC1-208ENST00000519004 SLC23A2Q9UGH3 650 aa12.37□□□□□ -0.43
PABPC1-208ENST00000519004 WIF1Q9Y5W5 379 aa12.37□□□□□ -0.43
PABPC1-208ENST00000519004 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.37□□□□□ -0.43
PABPC1-208ENST00000519004 M0R036 132 aa12.37□□□□□ -0.43
PABPC1-208ENST00000519004 EREGO14944 169 aa12.37□□□□□ -0.43
PABPC1-208ENST00000519004 HLA-AP01891 365 aaKnown RBP12.37□□□□□ -0.43
PABPC1-208ENST00000519004 VAMP1P23763 118 aa12.37□□□□□ -0.43
PABPC1-208ENST00000519004 PSMB10P40306 273 aa12.37□□□□□ -0.43
PABPC1-208ENST00000519004 FRKP42685 505 aaPredicted RBP12.37□□□□□ -0.43
PABPC1-208ENST00000519004 SLC7A9P82251 487 aa12.37□□□□□ -0.43
PABPC1-208ENST00000519004 LTBQ06643 244 aa12.37□□□□□ -0.43
PABPC1-208ENST00000519004 ZNF177Q13360 481 aaPredicted RBP12.37□□□□□ -0.43
PABPC1-208ENST00000519004 MEF2DQ14814 521 aa12.37□□□□□ -0.43
PABPC1-208ENST00000519004 KHDC3LQ587J8 217 aa12.37□□□□□ -0.43
PABPC1-208ENST00000519004 VRK2Q86Y07 508 aa12.37□□□□□ -0.43
PABPC1-208ENST00000519004 GABRG1Q8N1C3 465 aa12.37□□□□□ -0.43
PABPC1-208ENST00000519004 ARL14Q8N4G2 192 aa12.37□□□□□ -0.43
PABPC1-208ENST00000519004 OR9A2Q8NGT5 310 aa12.37□□□□□ -0.43
PABPC1-208ENST00000519004 DCUN1D4Q92564 292 aa12.37□□□□□ -0.43
PABPC1-208ENST00000519004 FOXRED1Q96CU9 486 aaPredicted RBP12.37□□□□□ -0.43
PABPC1-208ENST00000519004 POM121Q96HA1 1249 aa12.37□□□□□ -0.43
PABPC1-208ENST00000519004 MYADMQ96S97 322 aa12.37□□□□□ -0.43
PABPC1-208ENST00000519004 BCO1Q9HAY6 547 aa12.37□□□□□ -0.43
PABPC1-208ENST00000519004 KCNIP3Q9Y2W7 256 aa12.37□□□□□ -0.43
PABPC1-208ENST00000519004 ADAM18Q9Y3Q7 739 aa12.37□□□□□ -0.43
PABPC1-208ENST00000519004 MMACHCQ9Y4U1 282 aa12.37□□□□□ -0.43
PABPC1-208ENST00000519004 CSAG2Q9Y5P2 127 aa12.37□□□□□ -0.43
PABPC1-208ENST00000519004 POMT1Q9Y6A1 747 aa12.37□□□□□ -0.43
PABPC1-208ENST00000519004 TRBV6-7A0A0A0MS04 114 aa12.36□□□□□ -0.43
PABPC1-208ENST00000519004 UNC119BA6NIH7 251 aa12.36□□□□□ -0.43
PABPC1-208ENST00000519004 A8MWP6 167 aa12.36□□□□□ -0.43
PABPC1-208ENST00000519004 ADM5C9JUS6 153 aa12.36□□□□□ -0.43
PABPC1-208ENST00000519004 GYPBP06028 91 aa12.36□□□□□ -0.43
PABPC1-208ENST00000519004 ADRA2CP18825 462 aa12.36□□□□□ -0.43
PABPC1-208ENST00000519004 MPZP25189 248 aa12.36□□□□□ -0.43
PABPC1-208ENST00000519004 TEAD1P28347 426 aa12.36□□□□□ -0.43
PABPC1-208ENST00000519004 SLC6A9P48067 706 aa12.36□□□□□ -0.43
PABPC1-208ENST00000519004 BPIFB3P59826 476 aa12.36□□□□□ -0.43
PABPC1-208ENST00000519004 ADGRF1Q5T601 910 aa12.36□□□□□ -0.43
PABPC1-208ENST00000519004 OR2A2Q6IF42 318 aa12.36□□□□□ -0.43
PABPC1-208ENST00000519004 C16orf59Q7L2K0 433 aa12.36□□□□□ -0.43
PABPC1-208ENST00000519004 SYS1Q8N2H4 156 aa12.36□□□□□ -0.43
PABPC1-208ENST00000519004 PRSS35Q8N3Z0 413 aa12.36□□□□□ -0.43
PABPC1-208ENST00000519004 OR52L1Q8NGH7 329 aa12.36□□□□□ -0.43
PABPC1-208ENST00000519004 OR10J5Q8NHC4 309 aa12.36□□□□□ -0.43
PABPC1-208ENST00000519004 OR8D1Q8WZ84 308 aa12.36□□□□□ -0.43
PABPC1-208ENST00000519004 SLC25A21Q9BQT8 299 aaPredicted RBP12.36□□□□□ -0.43
PABPC1-208ENST00000519004 DPH1Q9BZG8 443 aa12.36□□□□□ -0.43
PABPC1-208ENST00000519004 HAO2Q9NYQ3 351 aa12.36□□□□□ -0.43
PABPC1-208ENST00000519004 NPIPB15A6NHN6 443 aaPredicted RBP12.36□□□□□ -0.43
PABPC1-208ENST00000519004 MTX2O75431 263 aa12.36□□□□□ -0.43
PABPC1-208ENST00000519004 AK1P00568 194 aa12.36□□□□□ -0.43
PABPC1-208ENST00000519004 LIPCP11150 499 aa12.36□□□□□ -0.43
PABPC1-208ENST00000519004 CSRP1P21291 193 aaKnown RBP12.36□□□□□ -0.43
PABPC1-208ENST00000519004 MAOAP21397 527 aa12.36□□□□□ -0.43
PABPC1-208ENST00000519004 ID4P47928 161 aa12.36□□□□□ -0.43
PABPC1-208ENST00000519004 CRYBB1P53674 252 aaPredicted RBP12.36□□□□□ -0.43
PABPC1-208ENST00000519004 TAF10Q12962 218 aa12.36□□□□□ -0.43
PABPC1-208ENST00000519004 GFI1BQ5VTD9 330 aa12.36□□□□□ -0.43
PABPC1-208ENST00000519004 ZNF385CQ66K41 422 aaPredicted RBP12.36□□□□□ -0.43
PABPC1-208ENST00000519004 STAC2Q6ZMT1 411 aa12.36□□□□□ -0.43
PABPC1-208ENST00000519004 CCDC116Q8IYX3 515 aa12.36□□□□□ -0.43
PABPC1-208ENST00000519004 HIST3H2BBQ8N257 126 aa12.36□□□□□ -0.43
PABPC1-208ENST00000519004 TTC9BQ8N6N2 239 aa12.36□□□□□ -0.43
PABPC1-208ENST00000519004 ZSCAN4Q8NAM6 433 aaPredicted RBP12.36□□□□□ -0.43
PABPC1-208ENST00000519004 CYB561A3Q8NBI2 242 aa12.36□□□□□ -0.43
PABPC1-208ENST00000519004 RAB24Q969Q5 203 aa12.36□□□□□ -0.43
PABPC1-208ENST00000519004 WDR34Q96EX3 536 aa12.36□□□□□ -0.43
PABPC1-208ENST00000519004 SLC41A3Q96GZ6 507 aa12.36□□□□□ -0.43
PABPC1-208ENST00000519004 NDUFAF3Q9BU61 184 aa12.36□□□□□ -0.43
PABPC1-208ENST00000519004 GPR61Q9BZJ8 451 aa12.36□□□□□ -0.43
PABPC1-208ENST00000519004 RGCCQ9H4X1 137 aa12.36□□□□□ -0.43
PABPC1-208ENST00000519004 SIRT7Q9NRC8 400 aa12.36□□□□□ -0.43
PABPC1-208ENST00000519004 VSX1Q9NZR4 365 aaPredicted RBP12.36□□□□□ -0.43
PABPC1-208ENST00000519004 TMEM202A6NGA9 273 aa12.35□□□□□ -0.43
PABPC1-208ENST00000519004 TBX19O60806 448 aa12.35□□□□□ -0.43
PABPC1-208ENST00000519004 FKTNO75072 461 aa12.35□□□□□ -0.43
PABPC1-208ENST00000519004 SOD3P08294 240 aa12.35□□□□□ -0.43
PABPC1-208ENST00000519004 ATP1B2P14415 290 aaPredicted RBP12.35□□□□□ -0.43
PABPC1-208ENST00000519004 HNRNPKP61978 463 aaKnown RBP eCLIP12.35□□□□□ -0.43
PABPC1-208ENST00000519004 CRMP1Q14194 572 aa12.35□□□□□ -0.43
PABPC1-208ENST00000519004 AMZ1Q400G9 498 aa12.35□□□□□ -0.43
PABPC1-208ENST00000519004 THSD4Q6ZMP0 1018 aa12.35□□□□□ -0.43
PABPC1-208ENST00000519004 SAMD7Q7Z3H4 446 aa12.35□□□□□ -0.43
PABPC1-208ENST00000519004 BIVMQ86UB2 503 aa12.35□□□□□ -0.43
PABPC1-208ENST00000519004 LMNTD1Q8N9Z9 388 aa12.35□□□□□ -0.43
PABPC1-208ENST00000519004 SLC2A12Q8TD20 617 aa12.35□□□□□ -0.43
PABPC1-208ENST00000519004 ASB17Q8WXJ9 295 aa12.35□□□□□ -0.43
PABPC1-208ENST00000519004 TM4SF18Q96CE8 201 aa12.35□□□□□ -0.43
PABPC1-208ENST00000519004 ZG16BQ96DA0 208 aa12.35□□□□□ -0.43
PABPC1-208ENST00000519004 OTUB2Q96DC9 234 aa12.35□□□□□ -0.43
PABPC1-208ENST00000519004 MVB12AQ96EY5 273 aa12.35□□□□□ -0.43
PABPC1-208ENST00000519004 RNF126Q9BV68 326 aa12.35□□□□□ -0.43
PABPC1-208ENST00000519004 UNKLQ9H9P5 680 aaKnown RBP12.35□□□□□ -0.43
PABPC1-208ENST00000519004 HDGFL3Q9Y3E1 203 aa12.35□□□□□ -0.43
PABPC1-208ENST00000519004 FLVCR1Q9Y5Y0 555 aa12.35□□□□□ -0.43
PABPC1-208ENST00000519004 GPRIN2O60269 458 aa12.35□□□□□ -0.43
PABPC1-208ENST00000519004 SLCO2B1O94956 709 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms