RNA–Protein interactions for RNA: ENST00000518647.5

IKBKB-208, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, human

TSL 2

Gene IKBKB, Length 1,543 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IKBKB-208	ENST00000518647	TNFRSF11B	O00300	401 aa		11.42	□□□□□ -0.58
IKBKB-208	ENST00000518647	THRB	P10828	461 aa		11.42	□□□□□ -0.58
IKBKB-208	ENST00000518647	PRKACG	P22612	351 aa		11.42	□□□□□ -0.58
IKBKB-208	ENST00000518647	FOXG1	P55316	489 aa	Predicted RBP	11.42	□□□□□ -0.58
IKBKB-208	ENST00000518647	CLDN17	P56750	224 aa		11.42	□□□□□ -0.58
IKBKB-208	ENST00000518647	PUDP	Q08623	228 aa		11.42	□□□□□ -0.58
IKBKB-208	ENST00000518647	ST3GAL3	Q11203	375 aa		11.42	□□□□□ -0.58
IKBKB-208	ENST00000518647	ACKR1	Q16570	336 aa		11.42	□□□□□ -0.58
IKBKB-208	ENST00000518647	ZNF74	Q16587	644 aa		11.42	□□□□□ -0.58
IKBKB-208	ENST00000518647	MS4A18	Q3C1V0	323 aa		11.42	□□□□□ -0.58
IKBKB-208	ENST00000518647	C1QTNF12	Q5T7M4	302 aa		11.42	□□□□□ -0.58
IKBKB-208	ENST00000518647	ZNF770	Q6IQ21	691 aa	Predicted RBP	11.42	□□□□□ -0.58
IKBKB-208	ENST00000518647	SHQ1	Q6PI26	577 aa	Known RBP	11.42	□□□□□ -0.58
IKBKB-208	ENST00000518647	SEZ6L2	Q6UXD5	910 aa		11.42	□□□□□ -0.58
IKBKB-208	ENST00000518647	SPNS3	Q6ZMD2	512 aa		11.42	□□□□□ -0.58
IKBKB-208	ENST00000518647	ZNF704	Q6ZNC4	412 aa	Predicted RBP	11.42	□□□□□ -0.58
IKBKB-208	ENST00000518647	UEVLD	Q8IX04	471 aa		11.42	□□□□□ -0.58
IKBKB-208	ENST00000518647	C17orf78	Q8N4C9	275 aa		11.42	□□□□□ -0.58
IKBKB-208	ENST00000518647	ALPK1	Q96QP1	1244 aa		11.42	□□□□□ -0.58
IKBKB-208	ENST00000518647	CIB1	Q99828	191 aa		11.42	□□□□□ -0.58
IKBKB-208	ENST00000518647	ANKRD19P	Q9H560	264 aa		11.42	□□□□□ -0.58
IKBKB-208	ENST00000518647	UBTD1	Q9HAC8	227 aa		11.42	□□□□□ -0.58
IKBKB-208	ENST00000518647	PRRC2A	P48634	2157 aa	Known RBP	11.41	□□□□□ -0.58
IKBKB-208	ENST00000518647	F8	P00451	2351 aa		11.41	□□□□□ -0.58
IKBKB-208	ENST00000518647	SH3PXD2B	A1X283	911 aa		11.41	□□□□□ -0.58
IKBKB-208	ENST00000518647	ZNF587B	E7ETH6	402 aa		11.41	□□□□□ -0.58
IKBKB-208	ENST00000518647	LRRN3	E7EW58	273 aa		11.41	□□□□□ -0.58
IKBKB-208	ENST00000518647	KPNA4	O00629	521 aa	Predicted RBP	11.41	□□□□□ -0.58
IKBKB-208	ENST00000518647	PLPP3	O14495	311 aa		11.41	□□□□□ -0.58
IKBKB-208	ENST00000518647	SOCS2	O14508	198 aa		11.41	□□□□□ -0.58
IKBKB-208	ENST00000518647	GNGT2	O14610	69 aa		11.41	□□□□□ -0.58
IKBKB-208	ENST00000518647	AKAP8	O43823	692 aa	Known RBP	11.41	□□□□□ -0.58
IKBKB-208	ENST00000518647	ZNF432	O94892	652 aa		11.41	□□□□□ -0.58
IKBKB-208	ENST00000518647	CH25H	O95992	272 aa		11.41	□□□□□ -0.58
IKBKB-208	ENST00000518647	CD3E	P07766	207 aa		11.41	□□□□□ -0.58
IKBKB-208	ENST00000518647	ZNF26	P17031	533 aa	Predicted RBP	11.41	□□□□□ -0.58
IKBKB-208	ENST00000518647	CD53	P19397	219 aa		11.41	□□□□□ -0.58
IKBKB-208	ENST00000518647	AHCY	P23526	432 aa		11.41	□□□□□ -0.58
IKBKB-208	ENST00000518647	IFNA8	P32881	189 aa		11.41	□□□□□ -0.58
IKBKB-208	ENST00000518647	RBM34	P42696	430 aa	Known RBP	11.41	□□□□□ -0.58
IKBKB-208	ENST00000518647	FOXD4	Q12950	439 aa	Predicted RBP	11.41	□□□□□ -0.58
IKBKB-208	ENST00000518647	TRAM2	Q15035	370 aa		11.41	□□□□□ -0.58
IKBKB-208	ENST00000518647	MICA	Q29983	383 aa		11.41	□□□□□ -0.58
IKBKB-208	ENST00000518647	NCMAP	Q5T1S8	102 aa		11.41	□□□□□ -0.58
IKBKB-208	ENST00000518647	C9orf135	Q5VTT2	229 aa		11.41	□□□□□ -0.58
IKBKB-208	ENST00000518647	PODNL1	Q6PEZ8	512 aa		11.41	□□□□□ -0.58
IKBKB-208	ENST00000518647	C20orf204	Q6ZNR8	217 aa		11.41	□□□□□ -0.58
IKBKB-208	ENST00000518647	PXK	Q7Z7A4	578 aa		11.41	□□□□□ -0.58
IKBKB-208	ENST00000518647	SVOPL	Q8N434	492 aa		11.41	□□□□□ -0.58
IKBKB-208	ENST00000518647	OR5J2	Q8NH18	312 aa		11.41	□□□□□ -0.58
IKBKB-208	ENST00000518647	OR52N5	Q8NH56	324 aa		11.41	□□□□□ -0.58
IKBKB-208	ENST00000518647	NRBF2	Q96F24	287 aa		11.41	□□□□□ -0.58
IKBKB-208	ENST00000518647	ALKBH3	Q96Q83	286 aa	Predicted RBP	11.41	□□□□□ -0.58
IKBKB-208	ENST00000518647	LINC00470	Q9BZP3	86 aa		11.41	□□□□□ -0.58
IKBKB-208	ENST00000518647	FKRP	Q9H9S5	495 aa		11.41	□□□□□ -0.58
IKBKB-208	ENST00000518647	NANS	Q9NR45	359 aa		11.41	□□□□□ -0.58
IKBKB-208	ENST00000518647	RNF115	Q9Y4L5	304 aa		11.41	□□□□□ -0.58
IKBKB-208	ENST00000518647	NOX1	Q9Y5S8	564 aa		11.41	□□□□□ -0.58
IKBKB-208	ENST00000518647	ITPR3	Q14573	2671 aa		11.41	□□□□□ -0.58
IKBKB-208	ENST00000518647		G3V2T6	193 aa		11.4	□□□□□ -0.58
IKBKB-208	ENST00000518647	TRAF3IP2	O43734	574 aa	Predicted RBP	11.4	□□□□□ -0.58
IKBKB-208	ENST00000518647	SLC43A1	O75387	559 aa		11.4	□□□□□ -0.58
IKBKB-208	ENST00000518647	UPK3A	O75631	287 aa		11.4	□□□□□ -0.58
IKBKB-208	ENST00000518647	OR6A2	O95222	327 aa		11.4	□□□□□ -0.58
IKBKB-208	ENST00000518647	HPR	P00739	348 aa		11.4	□□□□□ -0.58
IKBKB-208	ENST00000518647	HIST1H2AB	P04908	130 aa		11.4	□□□□□ -0.58
IKBKB-208	ENST00000518647	TFAP2A	P05549	437 aa		11.4	□□□□□ -0.58
IKBKB-208	ENST00000518647	ZNF23	P17027	643 aa		11.4	□□□□□ -0.58
IKBKB-208	ENST00000518647	CDH2	P19022	906 aa	Predicted RBP	11.4	□□□□□ -0.58
IKBKB-208	ENST00000518647	HOXC12	P31275	282 aa		11.4	□□□□□ -0.58
IKBKB-208	ENST00000518647	SMIM11A	P58511	58 aa		11.4	□□□□□ -0.58
IKBKB-208	ENST00000518647	POU3F1	Q03052	451 aa	Predicted RBP	11.4	□□□□□ -0.58
IKBKB-208	ENST00000518647	BSPH1	Q075Z2	132 aa		11.4	□□□□□ -0.58
IKBKB-208	ENST00000518647	LGALS3BP	Q08380	585 aa		11.4	□□□□□ -0.58
IKBKB-208	ENST00000518647	GK3P	Q14409	553 aa		11.4	□□□□□ -0.58
IKBKB-208	ENST00000518647	DEFB113	Q30KQ7	82 aa		11.4	□□□□□ -0.58
IKBKB-208	ENST00000518647	FGD3	Q5JSP0	725 aa		11.4	□□□□□ -0.58
IKBKB-208	ENST00000518647	HIST3H2A	Q7L7L0	130 aa		11.4	□□□□□ -0.58
IKBKB-208	ENST00000518647	SATL1	Q86VE3	508 aa		11.4	□□□□□ -0.58
IKBKB-208	ENST00000518647	ANKK1	Q8NFD2	765 aa		11.4	□□□□□ -0.58
IKBKB-208	ENST00000518647	TMEM255B	Q8WV15	326 aa		11.4	□□□□□ -0.58
IKBKB-208	ENST00000518647	HIST1H2AC	Q93077	130 aa		11.4	□□□□□ -0.58
IKBKB-208	ENST00000518647	PIGT	Q969N2	578 aa		11.4	□□□□□ -0.58
IKBKB-208	ENST00000518647	BOD1	Q96IK1	185 aa		11.4	□□□□□ -0.58
IKBKB-208	ENST00000518647	HS6ST2	Q96MM7	605 aa		11.4	□□□□□ -0.58
IKBKB-208	ENST00000518647	GABARAPL1	Q9H0R8	117 aa		11.4	□□□□□ -0.58
IKBKB-208	ENST00000518647	CXXC4	Q9H2H0	198 aa		11.4	□□□□□ -0.58
IKBKB-208	ENST00000518647	MEPE	Q9NQ76	525 aa	Predicted RBP	11.4	□□□□□ -0.58
IKBKB-208	ENST00000518647	ZNF229	Q9UJW7	825 aa		11.4	□□□□□ -0.58
IKBKB-208	ENST00000518647	SLC25A15	Q9Y619	301 aa		11.4	□□□□□ -0.58
IKBKB-208	ENST00000518647	HIVEP1	P15822	2718 aa		11.4	□□□□□ -0.58
IKBKB-208	ENST00000518647	DPRX	A6NFQ7	191 aa		11.4	□□□□□ -0.59
IKBKB-208	ENST00000518647	DLGAP1	O14490	977 aa		11.4	□□□□□ -0.59
IKBKB-208	ENST00000518647	E2F6	O75461	281 aa		11.4	□□□□□ -0.59
IKBKB-208	ENST00000518647	PLAU	P00749	431 aa		11.4	□□□□□ -0.59
IKBKB-208	ENST00000518647	IGF2	P01344	180 aa		11.4	□□□□□ -0.59
IKBKB-208	ENST00000518647	ADORA3	P0DMS8	318 aa		11.4	□□□□□ -0.59
IKBKB-208	ENST00000518647	HLA-DOB	P13765	273 aa		11.4	□□□□□ -0.59
IKBKB-208	ENST00000518647	DAP	P51397	102 aa		11.4	□□□□□ -0.59
IKBKB-208	ENST00000518647	UGT2B15	P54855	530 aa		11.4	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms