RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 HMGCS1Q01581 520 aa2.81□□□□□ -1.96
SQLE-202ENST00000518604 LRRC63Q05C16 580 aa2.81□□□□□ -1.96
SQLE-202ENST00000518604 AQP6Q13520 282 aa2.81□□□□□ -1.96
SQLE-202ENST00000518604 GGTLC2Q14390 218 aa2.81□□□□□ -1.96
SQLE-202ENST00000518604 GUCA2BQ16661 112 aa2.81□□□□□ -1.96
SQLE-202ENST00000518604 PRAMEF5Q5TYX0 476 aa2.81□□□□□ -1.96
SQLE-202ENST00000518604 PRAMEF6Q5VXH4 476 aa2.81□□□□□ -1.96
SQLE-202ENST00000518604 KIR2DL5AQ8N109 375 aa2.81□□□□□ -1.96
SQLE-202ENST00000518604 KIR2DL5BQ8NHK3 375 aa2.81□□□□□ -1.96
SQLE-202ENST00000518604 PIBF1Q8WXW3 757 aa2.81□□□□□ -1.96
SQLE-202ENST00000518604 TUBGCP3Q96CW5 907 aa2.81□□□□□ -1.96
SQLE-202ENST00000518604 C12orf42Q96LP6 360 aa2.81□□□□□ -1.96
SQLE-202ENST00000518604 TMEM59Q9BXS4 323 aa2.81□□□□□ -1.96
SQLE-202ENST00000518604 DNTTIP1Q9H147 329 aa2.81□□□□□ -1.96
SQLE-202ENST00000518604 CDC42EP4Q9H3Q1 356 aaKnown RBP2.81□□□□□ -1.96
SQLE-202ENST00000518604 SHPKQ9UHJ6 478 aa2.81□□□□□ -1.96
SQLE-202ENST00000518604 MAP3K15Q6ZN16 1313 aa2.81□□□□□ -1.96
SQLE-202ENST00000518604 A0A096LNJ9 63 aa2.8□□□□□ -1.96
SQLE-202ENST00000518604 TRAV39A0A0B4J263 110 aa2.8□□□□□ -1.96
SQLE-202ENST00000518604 ARHGEF35A5YM69 484 aa2.8□□□□□ -1.96
SQLE-202ENST00000518604 MAGEB4O15481 346 aaPredicted RBP2.8□□□□□ -1.96
SQLE-202ENST00000518604 IGLV2-23P01705 113 aa2.8□□□□□ -1.96
SQLE-202ENST00000518604 PRB2P02812 416 aaPredicted RBP2.8□□□□□ -1.96
SQLE-202ENST00000518604 IGKV3-11P04433 115 aa2.8□□□□□ -1.96
SQLE-202ENST00000518604 ZNF32P17041 273 aa2.8□□□□□ -1.96
SQLE-202ENST00000518604 CASP14P31944 242 aa2.8□□□□□ -1.96
SQLE-202ENST00000518604 CXCL5P42830 114 aa2.8□□□□□ -1.96
SQLE-202ENST00000518604 ACTR3P61158 418 aa2.8□□□□□ -1.96
SQLE-202ENST00000518604 KCNJ2P63252 427 aa2.8□□□□□ -1.96
SQLE-202ENST00000518604 BST1Q10588 318 aa2.8□□□□□ -1.96
SQLE-202ENST00000518604 ZBED5Q49AG3 693 aa2.8□□□□□ -1.96
SQLE-202ENST00000518604 LYPD2Q6UXB3 125 aa2.8□□□□□ -1.96
SQLE-202ENST00000518604 NANOGNBQ7Z5D8 188 aa2.8□□□□□ -1.96
SQLE-202ENST00000518604 LHFPL3Q86UP9 236 aa2.8□□□□□ -1.96
SQLE-202ENST00000518604 PCP2Q8IVA1 136 aa2.8□□□□□ -1.96
SQLE-202ENST00000518604 PUSL1Q8N0Z8 303 aaKnown RBP2.8□□□□□ -1.96
SQLE-202ENST00000518604 CEP112Q8N8E3 955 aa2.8□□□□□ -1.96
SQLE-202ENST00000518604 OR2L3Q8NG85 312 aa2.8□□□□□ -1.96
SQLE-202ENST00000518604 OR9K2Q8NGE7 335 aa2.8□□□□□ -1.96
SQLE-202ENST00000518604 ACTRT1Q8TDG2 376 aa2.8□□□□□ -1.96
SQLE-202ENST00000518604 SDR42E1Q8WUS8 393 aa2.8□□□□□ -1.96
SQLE-202ENST00000518604 GEMIN6Q8WXD5 167 aaKnown RBP2.8□□□□□ -1.96
SQLE-202ENST00000518604 FBXO32Q969P5 355 aa2.8□□□□□ -1.96
SQLE-202ENST00000518604 SGK3Q96BR1 496 aa2.8□□□□□ -1.96
SQLE-202ENST00000518604 TPD52L3Q96J77 140 aa2.8□□□□□ -1.96
SQLE-202ENST00000518604 TSSK3Q96PN8 268 aa2.8□□□□□ -1.96
SQLE-202ENST00000518604 LHX9Q9NQ69 397 aa2.8□□□□□ -1.96
SQLE-202ENST00000518604 SLC7A8Q9UHI5 535 aa2.8□□□□□ -1.96
SQLE-202ENST00000518604 ZNF223Q9UK11 482 aaPredicted RBP2.8□□□□□ -1.96
SQLE-202ENST00000518604 IKBKGQ9Y6K9 419 aa2.8□□□□□ -1.96
SQLE-202ENST00000518604 A0A1B0GVI7 797 aa2.79□□□□□ -1.96
SQLE-202ENST00000518604 MPHOSPH10O00566 681 aaKnown RBP2.79□□□□□ -1.96
SQLE-202ENST00000518604 EIF3GO75821 320 aaKnown RBP eCLIP2.79□□□□□ -1.96
SQLE-202ENST00000518604 LONP1P36776 959 aaKnown RBP2.79□□□□□ -1.96
SQLE-202ENST00000518604 TPMTP51580 245 aa2.79□□□□□ -1.96
SQLE-202ENST00000518604 PLP1P60201 277 aa2.79□□□□□ -1.96
SQLE-202ENST00000518604 RPS21P63220 83 aaKnown RBP2.79□□□□□ -1.96
SQLE-202ENST00000518604 ENPEPQ07075 957 aa2.79□□□□□ -1.96
SQLE-202ENST00000518604 MAJINQ3KP22 176 aa2.79□□□□□ -1.96
SQLE-202ENST00000518604 TTLL9Q3SXZ7 439 aa2.79□□□□□ -1.96
SQLE-202ENST00000518604 TFDP3Q5H9I0 405 aa2.79□□□□□ -1.96
SQLE-202ENST00000518604 CCDC73Q6ZRK6 1079 aa2.79□□□□□ -1.96
SQLE-202ENST00000518604 ZNF596Q8TC21 504 aa2.79□□□□□ -1.96
SQLE-202ENST00000518604 GPR151Q8TDV0 419 aa2.79□□□□□ -1.96
SQLE-202ENST00000518604 FOPNLQ96NB1 174 aa2.79□□□□□ -1.96
SQLE-202ENST00000518604 TAAR1Q96RJ0 339 aa2.79□□□□□ -1.96
SQLE-202ENST00000518604 RARRES2Q99969 163 aa2.79□□□□□ -1.96
SQLE-202ENST00000518604 TPK1Q9H3S4 243 aa2.79□□□□□ -1.96
SQLE-202ENST00000518604 KLHL28Q9NXS3 571 aa2.79□□□□□ -1.96
SQLE-202ENST00000518604 SLC2A8Q9NY64 477 aa2.79□□□□□ -1.96
SQLE-202ENST00000518604 TBX21Q9UL17 535 aa2.79□□□□□ -1.96
SQLE-202ENST00000518604 IGKV1D-13A0A0B4J2D9 117 aa2.78□□□□□ -1.96
SQLE-202ENST00000518604 PLAC8L1A1L4L8 177 aa2.78□□□□□ -1.96
SQLE-202ENST00000518604 ZNF726A6NNF4 738 aa2.78□□□□□ -1.96
SQLE-202ENST00000518604 SERPINA3P01011 423 aa2.78□□□□□ -1.96
SQLE-202ENST00000518604 IGKV1-13P0DP09 117 aa2.78□□□□□ -1.96
SQLE-202ENST00000518604 ZNF30P17039 623 aa2.78□□□□□ -1.96
SQLE-202ENST00000518604 MRPS22P82650 360 aaKnown RBP2.78□□□□□ -1.96
SQLE-202ENST00000518604 PAX5Q02548 391 aa2.78□□□□□ -1.96
SQLE-202ENST00000518604 ZNF92Q03936 586 aa2.78□□□□□ -1.96
SQLE-202ENST00000518604 REG3AQ06141 175 aa2.78□□□□□ -1.96
SQLE-202ENST00000518604 PRPSAP1Q14558 356 aa2.78□□□□□ -1.96
SQLE-202ENST00000518604 C16orf72Q14CZ0 275 aa2.78□□□□□ -1.96
SQLE-202ENST00000518604 KRTAP13-3Q3SY46 172 aa2.78□□□□□ -1.96
SQLE-202ENST00000518604 TMEM179Q6ZVK1 233 aa2.78□□□□□ -1.96
SQLE-202ENST00000518604 MREGQ8N565 214 aa2.78□□□□□ -1.96
SQLE-202ENST00000518604 Q8N976 141 aa2.78□□□□□ -1.96
SQLE-202ENST00000518604 SDR9C7Q8NEX9 313 aa2.78□□□□□ -1.96
SQLE-202ENST00000518604 SLC2A14Q8TDB8 520 aa2.78□□□□□ -1.96
SQLE-202ENST00000518604 LRRC58Q96CX6 371 aa2.78□□□□□ -1.96
SQLE-202ENST00000518604 DNAJC19Q96DA6 116 aa2.78□□□□□ -1.96
SQLE-202ENST00000518604 MED8Q96G25 268 aa2.78□□□□□ -1.96
SQLE-202ENST00000518604 CEP170P1Q96L14 293 aa2.78□□□□□ -1.96
SQLE-202ENST00000518604 VCXQ9H320 206 aa2.78□□□□□ -1.96
SQLE-202ENST00000518604 UGT1A7Q9HAW7 530 aa2.78□□□□□ -1.96
SQLE-202ENST00000518604 UGT1A10Q9HAW8 530 aa2.78□□□□□ -1.96
SQLE-202ENST00000518604 UGT1A8Q9HAW9 530 aa2.78□□□□□ -1.96
SQLE-202ENST00000518604 NUP50Q9UKX7 468 aa2.78□□□□□ -1.96
SQLE-202ENST00000518604 HPCAL4Q9UM19 191 aa2.78□□□□□ -1.96
SQLE-202ENST00000518604 F11RQ9Y624 299 aaKnown RBP2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms