RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 CSTBP04080 98 aaKnown RBP-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 EIF2S1P05198 315 aaKnown RBP-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 ATP5BP06576 529 aaKnown RBP-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 CSF3P09919 207 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 CD28P10747 220 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 GABRB1P18505 474 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 CXCR2P25025 360 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 TMOD1P28289 359 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 ELK4P28324 431 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 GJB2P29033 226 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 PEBP1P30086 187 aaKnown RBP-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 OR1D2P34982 312 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 AKR1C3P42330 323 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 SLC1A2P43004 574 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 PAFAH1B1P43034 410 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 CCNG1P51959 295 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 MFAP1P55081 439 aaKnown RBP-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 CDH13P55290 713 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 RELAQ04206 551 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 ICA1Q05084 483 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 PPFIA1Q13136 1202 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 ARL6IP1Q15041 203 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 KLHL38Q2WGJ6 581 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 LGALS9BQ3B8N2 356 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 ZBED5Q49AG3 693 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 MPPE1Q53F39 396 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 MPV17L2Q567V2 206 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 HSP90AB3PQ58FF7 597 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 YIF1BQ5BJH7 314 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 C1orf141Q5JVX7 400 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 TCHHL1Q5QJ38 904 aaPredicted RBP-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 LIPNQ5VXI9 398 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 SNRNP48Q6IEG0 339 aaKnown RBP-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 NCEH1Q6PIU2 408 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 C16orf54Q6UWD8 224 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 STAC2Q6ZMT1 411 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 ACOT7LQ6ZUV0 252 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 SLC16A14Q7RTX9 510 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 MOB3BQ86TA1 216 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 TLK2Q86UE8 772 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 BPIFB2Q8N4F0 458 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 OR4F17Q8NGA8 305 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 RDH11Q8TC12 318 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 SPPL2BQ8TCT7 592 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 TRUB1Q8WWH5 349 aaKnown RBP-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 DLX4Q92988 240 aaPredicted RBP-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 EEF1AKMT3Q96AZ1 226 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 NXNL1Q96CM4 212 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 MRPS24Q96EL2 167 aaKnown RBP-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 GALNT14Q96FL9 552 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 PGAM5Q96HS1 289 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 CCDC138Q96M89 665 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 OR4F4Q96R69 305 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 S1PR3Q99500 378 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 GPR22Q99680 433 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 SSX3Q99909 188 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 GAL3ST1Q99999 423 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 TMEM59Q9BXS4 323 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 NFKBIZQ9BYH8 718 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 CHST5Q9GZS9 411 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 PPDPFQ9H3Y8 114 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 VSIRQ9H7M9 311 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 SRD5A3Q9H8P0 318 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 XAB2Q9HCS7 855 aaKnown RBP-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 INIPQ9NRY2 104 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 GLRX2Q9NS18 164 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 C20orf96Q9NUD7 363 aaPredicted RBP-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 SMOXQ9NWM0 555 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 PAK1IP1Q9NWT1 392 aaPredicted RBP-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 QPCTLQ9NXS2 382 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 B3GNT2Q9NY97 397 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 TECRQ9NZ01 308 aaKnown RBP-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 PRO2289Q9P1D8 64 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 NFKBIL1Q9UBC1 381 aaPredicted RBP-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 GRHPRQ9UBQ7 328 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 SH3BGRL2Q9UJC5 107 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 NOB1Q9ULX3 412 aaKnown RBP-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 PLA2G4CQ9UP65 541 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 HYOU1Q9Y4L1 999 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 KCNE2Q9Y6J6 123 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 METP08581 1390 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 KDRP35968 1356 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 FGD5Q6ZNL6 1462 aa-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 ANKRD11Q6UB99 2663 aaPredicted RBP-1.4□□□□□ -2.63
RNU6-1238P-201ENST00000517215 MYH11P35749 1972 aa-1.41□□□□□ -2.63
RNU6-1238P-201ENST00000517215 PLXNA4Q9HCM2 1894 aa-1.41□□□□□ -2.63
RNU6-1238P-201ENST00000517215 BAZ1BQ9UIG0 1483 aaKnown RBP-1.41□□□□□ -2.63
RNU6-1238P-201ENST00000517215 LOC110117498A0A087WWA1 95 aa-1.41□□□□□ -2.64
RNU6-1238P-201ENST00000517215 LOC102724200A0A096LPH7 203 aaPredicted RBP-1.41□□□□□ -2.64
RNU6-1238P-201ENST00000517215 IGHV3-72A0A0B4J1Y9 119 aa-1.41□□□□□ -2.64
RNU6-1238P-201ENST00000517215 A0A0J9YVX5 310 aa-1.41□□□□□ -2.64
RNU6-1238P-201ENST00000517215 J3QQQ9 107 aa-1.41□□□□□ -2.64
RNU6-1238P-201ENST00000517215 M0R378 163 aa-1.41□□□□□ -2.64
RNU6-1238P-201ENST00000517215 DCTN6O00399 190 aa-1.41□□□□□ -2.64
RNU6-1238P-201ENST00000517215 KMOO15229 486 aa-1.41□□□□□ -2.64
RNU6-1238P-201ENST00000517215 SIVA1O15304 175 aa-1.41□□□□□ -2.64
RNU6-1238P-201ENST00000517215 PAPSS1O43252 624 aaPredicted RBP-1.41□□□□□ -2.64
RNU6-1238P-201ENST00000517215 PLIN3O60664 434 aa-1.41□□□□□ -2.64
RNU6-1238P-201ENST00000517215 ENTPD6O75354 484 aa-1.41□□□□□ -2.64
RNU6-1238P-201ENST00000517215 TRIM3O75382 744 aaPredicted RBP-1.41□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms