RNA–Protein interactions for RNA: ENST00000517083.1

RNU6-548P-201, Transcript of RNA, U6 small nuclear 548, pseudogene, humanhuman

BASIC

Gene RNU6-548P, Length 115 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-548P-201ENST00000517083 CD55P08174 381 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 OR8U9P0C7N5 309 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 FAM58BPP0C7Q3 252 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 CT45A8P0DMV1 189 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 CT45A9P0DMV2 189 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 C1GALT1C1LP0DN25 315 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 MYBL1P10243 752 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 ZNF35P13682 527 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 CD1DP15813 335 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 CHRNB2P17787 502 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 ATF4P18848 351 aaPredicted RBP1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 CSNK2A2P19784 350 aaPredicted RBP1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 CCNOP22674 350 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 AZGP1P25311 298 aaKnown RBP1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 SDHAP31040 664 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 BMI1P35226 326 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 ATP5OP48047 213 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 SLC9A3P48764 834 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 CENPAP49450 140 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 PRIM2P49643 509 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 GSK3BP49841 420 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 AP1S2P56377 157 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 LINC01547P58512 204 aaPredicted RBP1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 RAB1AP62820 205 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 CRADDP78560 199 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 MRPS35P82673 323 aaKnown RBP1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 ARF1P84077 181 aaKnown RBP1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 EWSR1Q01844 656 aaKnown RBP eCLIP1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 PRB3Q04118 309 aaPredicted RBP1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 CD300CQ08708 224 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 ICAM4Q14773 271 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 KIR2DS1Q14954 304 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 ABCA11PQ4W5N1 156 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 SYT14P1Q58G82 188 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 CT45A2Q5DJT8 189 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 MTX3Q5HYI7 312 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 CXorf66Q5JRM2 361 aaPredicted RBP1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 CTSL3PQ5NE16 218 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 EXOSC6Q5RKV6 272 aaKnown RBP1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 KLHDC7AQ5VTJ3 777 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 TMEM225Q6GV28 225 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 NIPAL3Q6P499 406 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 CRIP3Q6Q6R5 217 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 C10orf99Q6UWK7 81 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 ZYG11AQ6WRX3 759 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 PPP1R21Q6ZMI0 780 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 ZNF836Q6ZNA1 936 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 BTN2A1Q7KYR7 527 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 TCF24Q7RTU0 167 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 ZNF367Q7RTV3 350 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 GRINAQ7Z429 371 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 LINC00523Q86TU6 105 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 CTAGE6Q86UF2 777 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 THOC6Q86W42 341 aaKnown RBP1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 SNX32Q86XE0 403 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 CCDC103Q8IW40 242 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 KLHL7Q8IXQ5 586 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 CPNE9Q8IYJ1 553 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 PGAM4Q8N0Y7 254 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 Q8N1Y9 231 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 ZCCHC7Q8N3Z6 543 aaKnown RBP1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 PNKDQ8N490 385 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 MMGT1Q8N4V1 131 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 PQLC3Q8N755 202 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 PDPRQ8NCN5 879 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 HIPK4Q8NE63 616 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 SLC30A7Q8NEW0 376 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 VPS37AQ8NEZ2 397 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 OR11H1Q8NG94 326 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 OR7G2Q8NG99 324 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 OR11L1Q8NGX0 322 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 RFWD2Q8NHY2 731 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 C11orf45Q8TAV5 145 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 POC1BQ8TC44 478 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 PHOSPHO1Q8TCT1 267 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 CHPT1Q8WUD6 406 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 RNF138Q8WVD3 245 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 EDARADDQ8WWZ3 215 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 NELFBQ8WX92 580 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 UBE2E3Q969T4 207 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 TMEM45BQ96B21 275 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 HAUS1Q96CS2 278 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 TUBGCP3Q96CW5 907 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 IQCDQ96DY2 449 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 CMTM7Q96FZ5 175 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 MPP4Q96JB8 637 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 ZNF583Q96ND8 569 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 OLFM3Q96PB7 478 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 OR4K3Q96R72 315 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 NPAS1Q99742 590 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 LMF2Q9BU23 707 aaKnown RBP1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 ELOVL1Q9BW60 279 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 EBPLQ9BY08 206 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 OR11A1Q9GZK7 315 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 C1orf198Q9H425 327 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 LRRC40Q9H9A6 602 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 PLEKHA3Q9HB20 300 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 SIX2Q9NPC8 291 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 TRIM36Q9NQ86 728 aa1.48□□□□□ -2.17
RNU6-548P-201ENST00000517083 GIMAP4Q9NUV9 329 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms