RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 GABARAPO95166 117 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 SNX4O95219 450 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 KCNH1O95259 989 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 SNAP29O95721 258 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 CLIC3O95833 236 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 AGR2O95994 175 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 B3GALT4O96024 378 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 NPPAP01160 153 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 SMR3BP02814 79 aaPredicted RBP2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 IFNA6P05013 189 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 NGFRP08138 427 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 IL3P08700 152 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 SAGP10523 405 aaPredicted RBP2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 CD28P10747 220 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 G6PDP11413 515 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 CPN1P15169 458 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 SPNP16150 400 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 TCN1P20061 433 aaPredicted RBP2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 CCNA2P20248 432 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 TCEA1P23193 301 aaKnown RBP2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 S100A1P23297 94 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 CHMP24386 653 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 CD40LGP29965 261 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 NTSP30990 170 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 MAP3K8P41279 467 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 YAP1P46937 504 aaKnown RBP2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 GIPRP48546 466 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 TMED10P49755 219 aaKnown RBP2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 EMDP50402 254 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 SLC7A2P52569 658 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 PSMD4P55036 377 aaKnown RBP2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 MANFP55145 182 aaKnown RBP2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 GP2P55259 537 aaKnown RBP2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 NRG3P56975 720 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 GABARAPL2P60520 117 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 SIRPAP78324 504 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 SRSF3P84103 164 aaKnown RBP2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 PRR5P85299 388 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 ZNF267Q14586 743 aaPredicted RBP2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 ZNF846Q147U1 533 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 EBPQ15125 230 aaKnown RBP2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 RPS6KA2Q15349 733 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 TAB1Q15750 504 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 NEDD8Q15843 81 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 SWI5Q1ZZU3 235 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 MST1LQ2TV78 715 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 CTU2Q2VPK5 515 aaKnown RBP2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 ZNF791Q3KP31 576 aaPredicted RBP2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 CPTPQ5TA50 214 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 SLX4IPQ5VYV7 408 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 KRT80Q6KB66 452 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 ZNF544Q6NX49 715 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 TTC33Q6PID6 262 aaPredicted RBP2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 TBPL2Q6SJ96 375 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 CYP2R1Q6VVX0 501 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 FRRS1Q6ZNA5 592 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 PLEKHG7Q6ZR37 379 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 ZBTB49Q6ZSB9 765 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 C9orf139Q6ZV77 190 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 SLC29A4Q7RTT9 530 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 PRSS48Q7RTY5 328 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 NUP54Q7Z3B4 507 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 NANOGNBQ7Z5D8 188 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 ANKRD13BQ86YJ7 626 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 SNX29P2Q8IUI4 249 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 ZNF619Q8N2I2 560 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 RNF175Q8N4F7 328 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 C11orf42Q8N5U0 333 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 TMEM86BQ8N661 226 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 CDRT4Q8N9R6 151 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 FNDC5Q8NAU1 212 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 ANKK1Q8NFD2 765 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 OR6Q1Q8NGQ2 317 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 OR9I1Q8NGQ6 314 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 PNPT1Q8TCS8 783 aaKnown RBP2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 AGR3Q8TD06 166 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 SFXN5Q8TD22 340 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 ZFP90Q8TF47 636 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 RAB2BQ8WUD1 216 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 OR5P2Q8WZ92 322 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 NCLNQ969V3 563 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 ADIPOR1Q96A54 375 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 PPWD1Q96BP3 646 aaKnown RBP2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 S100PBPQ96BU1 408 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 ELP4Q96EB1 424 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 YIPF6Q96EC8 236 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 CENPNQ96H22 339 aaPredicted RBP2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 SH3YL1Q96HL8 342 aaPredicted RBP2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 C3orf30Q96M34 536 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 ZNF300Q96RE9 604 aaPredicted RBP2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 BBS4Q96RK4 519 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 SIGLEC11Q96RL6 698 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 MBOAT4Q96T53 435 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 HBEGFQ99075 208 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 ZBTB18Q99592 522 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 WACQ9BTA9 647 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 C9orf16Q9BUW7 83 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 SORBS1Q9BX66 1292 aaKnown RBP2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 WWTR1Q9GZV5 400 aa2.66□□□□□ -1.98
SCARNA13-201ENST00000516672 OR10A5Q9H207 317 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms