RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 CRADDP78560 199 aa-1.09□□□□□ -2.58
SCARNA23-201ENST00000516060 CCZ1BP86790 482 aa-1.09□□□□□ -2.58
SCARNA23-201ENST00000516060 CCZ1P86791 482 aaPredicted RBP-1.09□□□□□ -2.58
SCARNA23-201ENST00000516060 RGNQ15493 299 aa-1.09□□□□□ -2.58
SCARNA23-201ENST00000516060 CHRNA6Q15825 494 aa-1.09□□□□□ -2.58
SCARNA23-201ENST00000516060 BEND3Q5T5X7 828 aa-1.09□□□□□ -2.58
SCARNA23-201ENST00000516060 SPATA1Q5VX52 437 aa-1.09□□□□□ -2.58
SCARNA23-201ENST00000516060 APTXQ7Z2E3 356 aaKnown RBP-1.09□□□□□ -2.58
SCARNA23-201ENST00000516060 C16orf62Q7Z3J2 963 aa-1.09□□□□□ -2.58
SCARNA23-201ENST00000516060 PRSS58Q8IYP2 241 aa-1.09□□□□□ -2.58
SCARNA23-201ENST00000516060 STK40Q8N2I9 435 aa-1.09□□□□□ -2.58
SCARNA23-201ENST00000516060 OR4S2Q8NH73 311 aa-1.09□□□□□ -2.58
SCARNA23-201ENST00000516060 LMX1AQ8TE12 382 aa-1.09□□□□□ -2.58
SCARNA23-201ENST00000516060 UPRTQ96BW1 309 aa-1.09□□□□□ -2.58
SCARNA23-201ENST00000516060 RUFY1Q96T51 708 aa-1.09□□□□□ -2.58
SCARNA23-201ENST00000516060 PITX2Q99697 317 aa-1.09□□□□□ -2.58
SCARNA23-201ENST00000516060 SH3GL3Q99963 347 aa-1.09□□□□□ -2.58
SCARNA23-201ENST00000516060 SLC25A2Q9BXI2 301 aa-1.09□□□□□ -2.58
SCARNA23-201ENST00000516060 TMEM59Q9BXS4 323 aa-1.09□□□□□ -2.58
SCARNA23-201ENST00000516060 POLR1EQ9GZS1 481 aaKnown RBP-1.09□□□□□ -2.58
SCARNA23-201ENST00000516060 FGF23Q9GZV9 251 aaPredicted RBP-1.09□□□□□ -2.58
SCARNA23-201ENST00000516060 CYSTM1Q9H1C7 97 aa-1.09□□□□□ -2.58
SCARNA23-201ENST00000516060 TRPV6Q9H1D0 765 aa-1.09□□□□□ -2.58
SCARNA23-201ENST00000516060 IL37Q9NZH6 218 aa-1.09□□□□□ -2.58
SCARNA23-201ENST00000516060 FETUBQ9UGM5 382 aa-1.09□□□□□ -2.58
SCARNA23-201ENST00000516060 DDX19BQ9UMR2 479 aa-1.09□□□□□ -2.58
SCARNA23-201ENST00000516060 C22orf24Q9Y442 160 aa-1.09□□□□□ -2.58
SCARNA23-201ENST00000516060 BAZ2AQ9UIF9 1905 aaKnown RBP-1.09□□□□□ -2.58
SCARNA23-201ENST00000516060 ATG2BQ96BY7 2078 aa-1.09□□□□□ -2.58
SCARNA23-201ENST00000516060 NSD2O96028 1365 aa-1.09□□□□□ -2.58
SCARNA23-201ENST00000516060 PTPRZ1P23471 2315 aaPredicted RBP-1.1□□□□□ -2.59
SCARNA23-201ENST00000516060 VWA8A3KMH1 1905 aa-1.1□□□□□ -2.59
SCARNA23-201ENST00000516060 DYSFO75923 2080 aa-1.1□□□□□ -2.59
SCARNA23-201ENST00000516060 IGKV1D-42A0A075B6H8 117 aa-1.1□□□□□ -2.59
SCARNA23-201ENST00000516060 TRGV2A0A075B6R0 118 aa-1.1□□□□□ -2.59
SCARNA23-201ENST00000516060 IGHV7-4-1A0A0J9YVY3 117 aa-1.1□□□□□ -2.59
SCARNA23-201ENST00000516060 LOC105371045A0A1W2PR82 267 aa-1.1□□□□□ -2.59
SCARNA23-201ENST00000516060 ARHGEF37A1IGU5 675 aa-1.1□□□□□ -2.59
SCARNA23-201ENST00000516060 GOLGA6L4A6NEF3 574 aa-1.1□□□□□ -2.59
SCARNA23-201ENST00000516060 OXTP01178 125 aa-1.1□□□□□ -2.59
SCARNA23-201ENST00000516060 GZMBP10144 247 aa-1.1□□□□□ -2.59
SCARNA23-201ENST00000516060 HLA-DMAP28067 261 aa-1.1□□□□□ -2.59
SCARNA23-201ENST00000516060 CD1CP29017 333 aa-1.1□□□□□ -2.59
SCARNA23-201ENST00000516060 PITPNBP48739 271 aa-1.1□□□□□ -2.59
SCARNA23-201ENST00000516060 INPP1P49441 399 aa-1.1□□□□□ -2.59
SCARNA23-201ENST00000516060 NUMBP49757 651 aa-1.1□□□□□ -2.59
SCARNA23-201ENST00000516060 ATP1B3P54709 279 aa-1.1□□□□□ -2.59
SCARNA23-201ENST00000516060 RPS14P62263 151 aaKnown RBP-1.1□□□□□ -2.59
SCARNA23-201ENST00000516060 KRT83P78385 493 aa-1.1□□□□□ -2.59
SCARNA23-201ENST00000516060 PDIA2Q13087 525 aaKnown RBP-1.1□□□□□ -2.59
SCARNA23-201ENST00000516060 LGALSLQ3ZCW2 172 aaPredicted RBP-1.1□□□□□ -2.59
SCARNA23-201ENST00000516060 PDZD11Q5EBL8 140 aa-1.1□□□□□ -2.59
SCARNA23-201ENST00000516060 DAZ4Q86SG3 579 aaKnown RBP-1.1□□□□□ -2.59
SCARNA23-201ENST00000516060 ZNF546Q86UE3 836 aa-1.1□□□□□ -2.59
SCARNA23-201ENST00000516060 ZNF645Q8N7E2 425 aa-1.1□□□□□ -2.59
SCARNA23-201ENST00000516060 STKLD1Q8NE28 680 aa-1.1□□□□□ -2.59
SCARNA23-201ENST00000516060 CATSPER1Q8NEC5 780 aa-1.1□□□□□ -2.59
SCARNA23-201ENST00000516060 OR51G2Q8NGK0 314 aa-1.1□□□□□ -2.59
SCARNA23-201ENST00000516060 OR5D13Q8NGL4 314 aa-1.1□□□□□ -2.59
SCARNA23-201ENST00000516060 ZNF606Q8WXB4 792 aa-1.1□□□□□ -2.59
SCARNA23-201ENST00000516060 PHYHIPQ92561 330 aa-1.1□□□□□ -2.59
SCARNA23-201ENST00000516060 CORO2AQ92828 525 aa-1.1□□□□□ -2.59
SCARNA23-201ENST00000516060 FAM162AQ96A26 154 aa-1.1□□□□□ -2.59
SCARNA23-201ENST00000516060 NAP1L3Q99457 506 aaPredicted RBP-1.1□□□□□ -2.59
SCARNA23-201ENST00000516060 NUDT16L1Q9BRJ7 211 aaKnown RBP-1.1□□□□□ -2.59
SCARNA23-201ENST00000516060 ACTR6Q9GZN1 396 aa-1.1□□□□□ -2.59
SCARNA23-201ENST00000516060 TRPV5Q9NQA5 729 aa-1.1□□□□□ -2.59
SCARNA23-201ENST00000516060 PFDN4Q9NQP4 134 aa-1.1□□□□□ -2.59
SCARNA23-201ENST00000516060 DAZ1Q9NQZ3 744 aaKnown RBP-1.1□□□□□ -2.59
SCARNA23-201ENST00000516060 DDX18Q9NVP1 670 aaKnown RBP-1.1□□□□□ -2.59
SCARNA23-201ENST00000516060 MRPL39Q9NYK5 338 aaKnown RBP-1.1□□□□□ -2.59
SCARNA23-201ENST00000516060 CALYQ9NYX4 217 aa-1.1□□□□□ -2.59
SCARNA23-201ENST00000516060 KCNIP1Q9NZI2 227 aa-1.1□□□□□ -2.59
SCARNA23-201ENST00000516060 ZNF490Q9ULM2 529 aaPredicted RBP-1.1□□□□□ -2.59
SCARNA23-201ENST00000516060 RNF6Q9Y252 685 aa-1.1□□□□□ -2.59
SCARNA23-201ENST00000516060 TSPOAP1O95153 1857 aa-1.1□□□□□ -2.59
SCARNA23-201ENST00000516060 SHROOM4Q9ULL8 1493 aa-1.11□□□□□ -2.59
SCARNA23-201ENST00000516060 IGKV2-40A0A087WW87 121 aaPredicted RBP-1.11□□□□□ -2.59
SCARNA23-201ENST00000516060 A0A1B0GUS0 222 aa-1.11□□□□□ -2.59
SCARNA23-201ENST00000516060 G3V3Q6 166 aa-1.11□□□□□ -2.59
SCARNA23-201ENST00000516060 H3BRN7 92 aa-1.11□□□□□ -2.59
SCARNA23-201ENST00000516060 DNALI1O14645 258 aaPredicted RBP-1.11□□□□□ -2.59
SCARNA23-201ENST00000516060 CHST10O43529 356 aa-1.11□□□□□ -2.59
SCARNA23-201ENST00000516060 PSCAO43653 123 aa-1.11□□□□□ -2.59
SCARNA23-201ENST00000516060 IGKV2D-40P01614 121 aaPredicted RBP-1.11□□□□□ -2.59
SCARNA23-201ENST00000516060 GPX1P07203 203 aa-1.11□□□□□ -2.59
SCARNA23-201ENST00000516060 CT62P0C5K7 136 aa-1.11□□□□□ -2.59
SCARNA23-201ENST00000516060 GSTT2P0CG29 244 aa-1.11□□□□□ -2.59
SCARNA23-201ENST00000516060 GSTT2BP0CG30 244 aa-1.11□□□□□ -2.59
SCARNA23-201ENST00000516060 MARCKSP29966 332 aaPredicted RBP-1.11□□□□□ -2.59
SCARNA23-201ENST00000516060 CEACAM6P40199 344 aa-1.11□□□□□ -2.59
SCARNA23-201ENST00000516060 MAGEA8P43361 318 aa-1.11□□□□□ -2.59
SCARNA23-201ENST00000516060 SLC6A8P48029 635 aa-1.11□□□□□ -2.59
SCARNA23-201ENST00000516060 SERPINH1P50454 418 aaKnown RBP-1.11□□□□□ -2.59
SCARNA23-201ENST00000516060 CCNG1P51959 295 aa-1.11□□□□□ -2.59
SCARNA23-201ENST00000516060 RAD23AP54725 363 aa-1.11□□□□□ -2.59
SCARNA23-201ENST00000516060 FOXA1P55317 472 aa-1.11□□□□□ -2.59
SCARNA23-201ENST00000516060 ASIC1P78348 528 aa-1.11□□□□□ -2.59
SCARNA23-201ENST00000516060 MAB21L1Q13394 359 aa-1.11□□□□□ -2.59
SCARNA23-201ENST00000516060 CIRBPQ14011 172 aaKnown RBP-1.11□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms