RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 CHMP1AQ9HD42 196 aaPredicted RBP11.7□□□□□ -0.54
SMAD1-215ENST00000515385 PCDHGA1Q9Y5H4 931 aa11.7□□□□□ -0.54
SMAD1-215ENST00000515385 TVP23AA6NH52 213 aa11.69□□□□□ -0.54
SMAD1-215ENST00000515385 TGM5O43548 720 aa11.69□□□□□ -0.54
SMAD1-215ENST00000515385 IFNA17P01571 189 aa11.69□□□□□ -0.54
SMAD1-215ENST00000515385 TACSTD2P09758 323 aa11.69□□□□□ -0.54
SMAD1-215ENST00000515385 TMIGD3P0DMS9 266 aaPredicted RBP11.69□□□□□ -0.54
SMAD1-215ENST00000515385 CTSAP10619 480 aa11.69□□□□□ -0.54
SMAD1-215ENST00000515385 NQO2P16083 231 aa11.69□□□□□ -0.54
SMAD1-215ENST00000515385 CSNK2A2P19784 350 aaPredicted RBP11.69□□□□□ -0.54
SMAD1-215ENST00000515385 MAGEB1P43366 347 aa11.69□□□□□ -0.54
SMAD1-215ENST00000515385 SLC6A9P48067 706 aa11.69□□□□□ -0.54
SMAD1-215ENST00000515385 ZNF136P52737 540 aa11.69□□□□□ -0.54
SMAD1-215ENST00000515385 CYCSP99999 105 aaKnown RBP11.69□□□□□ -0.54
SMAD1-215ENST00000515385 ELAVL2Q12926 359 aaKnown RBP11.69□□□□□ -0.54
SMAD1-215ENST00000515385 RBM39Q14498 530 aaKnown RBP11.69□□□□□ -0.54
SMAD1-215ENST00000515385 ATXN7L3Q14CW9 347 aaPredicted RBP11.69□□□□□ -0.54
SMAD1-215ENST00000515385 LRRC37A5PQ49AS3 106 aa11.69□□□□□ -0.54
SMAD1-215ENST00000515385 CLLU1OSQ5K130 101 aa11.69□□□□□ -0.54
SMAD1-215ENST00000515385 ATPAF1Q5TC12 328 aaPredicted RBP11.69□□□□□ -0.54
SMAD1-215ENST00000515385 NKAIN2Q5VXU1 208 aa11.69□□□□□ -0.54
SMAD1-215ENST00000515385 GDPD4Q6W3E5 623 aa11.69□□□□□ -0.54
SMAD1-215ENST00000515385 REC114Q7Z4M0 266 aa11.69□□□□□ -0.54
SMAD1-215ENST00000515385 LYG2Q86SG7 212 aa11.69□□□□□ -0.54
SMAD1-215ENST00000515385 TMPRSS12Q86WS5 348 aa11.69□□□□□ -0.54
SMAD1-215ENST00000515385 CYB561A3Q8NBI2 242 aa11.69□□□□□ -0.54
SMAD1-215ENST00000515385 OR1J2Q8NGS2 313 aa11.69□□□□□ -0.54
SMAD1-215ENST00000515385 PFN4Q8NHR9 129 aa11.69□□□□□ -0.54
SMAD1-215ENST00000515385 FIBINQ8TAL6 211 aa11.69□□□□□ -0.54
SMAD1-215ENST00000515385 ZNF417Q8TAU3 575 aa11.69□□□□□ -0.54
SMAD1-215ENST00000515385 THRSPQ92748 146 aa11.69□□□□□ -0.54
SMAD1-215ENST00000515385 OR5B2Q96R09 309 aa11.69□□□□□ -0.54
SMAD1-215ENST00000515385 MESP1Q9BRJ9 268 aa11.69□□□□□ -0.54
SMAD1-215ENST00000515385 PCBD2Q9H0N5 130 aa11.69□□□□□ -0.54
SMAD1-215ENST00000515385 MEPEQ9NQ76 525 aaPredicted RBP11.69□□□□□ -0.54
SMAD1-215ENST00000515385 HS3ST2Q9Y278 367 aa11.69□□□□□ -0.54
SMAD1-215ENST00000515385 TRAV18A0A075B6X5 111 aa11.69□□□□□ -0.54
SMAD1-215ENST00000515385 FAM221BA6H8Z2 402 aa11.69□□□□□ -0.54
SMAD1-215ENST00000515385 POM121BA6NF01 834 aa11.69□□□□□ -0.54
SMAD1-215ENST00000515385 CDC40O60508 579 aaKnown RBP eCLIP11.69□□□□□ -0.54
SMAD1-215ENST00000515385 FBXO24O75426 580 aa11.69□□□□□ -0.54
SMAD1-215ENST00000515385 HMGA1P17096 107 aaKnown RBP11.69□□□□□ -0.54
SMAD1-215ENST00000515385 CSRP1P21291 193 aaKnown RBP11.69□□□□□ -0.54
SMAD1-215ENST00000515385 ITGA3P26006 1051 aa11.69□□□□□ -0.54
SMAD1-215ENST00000515385 PSMB6P28072 239 aa11.69□□□□□ -0.54
SMAD1-215ENST00000515385 PSMB10P40306 273 aa11.69□□□□□ -0.54
SMAD1-215ENST00000515385 PPICP45877 212 aa11.69□□□□□ -0.54
SMAD1-215ENST00000515385 DIO1P49895 249 aa11.69□□□□□ -0.54
SMAD1-215ENST00000515385 RBP2P50120 134 aa11.69□□□□□ -0.54
SMAD1-215ENST00000515385 TMEM35AQ53FP2 167 aa11.69□□□□□ -0.54
SMAD1-215ENST00000515385 FAHD2BQ6P2I3 314 aaPredicted RBP11.69□□□□□ -0.54
SMAD1-215ENST00000515385 ZNF836Q6ZNA1 936 aa11.69□□□□□ -0.54
SMAD1-215ENST00000515385 Q6ZNB5 142 aa11.69□□□□□ -0.54
SMAD1-215ENST00000515385 UBE3DQ7Z6J8 389 aa11.69□□□□□ -0.54
SMAD1-215ENST00000515385 DEFB132Q7Z7B7 95 aa11.69□□□□□ -0.54
SMAD1-215ENST00000515385 PAQR4Q8N4S7 273 aaPredicted RBP11.69□□□□□ -0.54
SMAD1-215ENST00000515385 OR10R2Q8NGX6 335 aa11.69□□□□□ -0.54
SMAD1-215ENST00000515385 ADAMTS15Q8TE58 950 aa11.69□□□□□ -0.54
SMAD1-215ENST00000515385 FAHD2AQ96GK7 314 aa11.69□□□□□ -0.54
SMAD1-215ENST00000515385 C14orf144Q96I85 54 aa11.69□□□□□ -0.54
SMAD1-215ENST00000515385 PHB2Q99623 299 aa11.69□□□□□ -0.54
SMAD1-215ENST00000515385 MICU1Q9BPX6 476 aa11.69□□□□□ -0.54
SMAD1-215ENST00000515385 SLC17A9Q9BYT1 436 aa11.69□□□□□ -0.54
SMAD1-215ENST00000515385 DPEP2Q9H4A9 486 aa11.69□□□□□ -0.54
SMAD1-215ENST00000515385 RPS10P5Q9NQ39 176 aa11.69□□□□□ -0.54
SMAD1-215ENST00000515385 C20orf141Q9NUB4 165 aa11.69□□□□□ -0.54
SMAD1-215ENST00000515385 GFOD1Q9NXC2 390 aa11.69□□□□□ -0.54
SMAD1-215ENST00000515385 CACFD1Q9UGQ2 172 aa11.69□□□□□ -0.54
SMAD1-215ENST00000515385 ANAPC1Q9H1A4 1944 aa11.68□□□□□ -0.54
SMAD1-215ENST00000515385 TRBV5-5A0A0J9YX44 114 aa11.68□□□□□ -0.54
SMAD1-215ENST00000515385 OIP5O43482 229 aa11.68□□□□□ -0.54
SMAD1-215ENST00000515385 ZFPL1O95159 310 aa11.68□□□□□ -0.54
SMAD1-215ENST00000515385 LYPD3O95274 346 aa11.68□□□□□ -0.54
SMAD1-215ENST00000515385 AK1P00568 194 aa11.68□□□□□ -0.54
SMAD1-215ENST00000515385 IL2RAP01589 272 aa11.68□□□□□ -0.54
SMAD1-215ENST00000515385 HLA-AP01891 365 aaKnown RBP11.68□□□□□ -0.54
SMAD1-215ENST00000515385 GYPBP06028 91 aa11.68□□□□□ -0.54
SMAD1-215ENST00000515385 ADRA2CP18825 462 aa11.68□□□□□ -0.54
SMAD1-215ENST00000515385 FUT1P19526 365 aa11.68□□□□□ -0.54
SMAD1-215ENST00000515385 AVPR2P30518 371 aa11.68□□□□□ -0.54
SMAD1-215ENST00000515385 SSR2P43308 183 aa11.68□□□□□ -0.54
SMAD1-215ENST00000515385 DVL1P1P54792 670 aaPredicted RBP11.68□□□□□ -0.54
SMAD1-215ENST00000515385 HTRA3P83110 453 aa11.68□□□□□ -0.54
SMAD1-215ENST00000515385 HGFACQ04756 655 aa11.68□□□□□ -0.54
SMAD1-215ENST00000515385 DUSP8Q13202 625 aa11.68□□□□□ -0.54
SMAD1-215ENST00000515385 ARHGAP19Q14CB8 494 aa11.68□□□□□ -0.54
SMAD1-215ENST00000515385 OR1Q1Q15612 314 aa11.68□□□□□ -0.54
SMAD1-215ENST00000515385 FRRS1Q6ZNA5 592 aa11.68□□□□□ -0.54
SMAD1-215ENST00000515385 SLC25A42Q86VD7 318 aa11.68□□□□□ -0.54
SMAD1-215ENST00000515385 MITD1Q8WV92 249 aa11.68□□□□□ -0.54
SMAD1-215ENST00000515385 TMED6Q8WW62 240 aa11.68□□□□□ -0.54
SMAD1-215ENST00000515385 RGP1Q92546 391 aaPredicted RBP11.68□□□□□ -0.54
SMAD1-215ENST00000515385 SEC22AQ96IW7 307 aa11.68□□□□□ -0.54
SMAD1-215ENST00000515385 TTTY10Q9BZA0 68 aa11.68□□□□□ -0.54
SMAD1-215ENST00000515385 FBXL21Q9UKT6 434 aa11.68□□□□□ -0.54
SMAD1-215ENST00000515385 LHX6Q9UPM6 363 aa11.68□□□□□ -0.54
SMAD1-215ENST00000515385 FRMPD3Q5JV73 1810 aa11.68□□□□□ -0.54
SMAD1-215ENST00000515385 BNIP3LO60238 219 aa11.67□□□□□ -0.54
SMAD1-215ENST00000515385 CLEC3AO75596 197 aa11.67□□□□□ -0.54
SMAD1-215ENST00000515385 ERAL1O75616 437 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms