RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 KNL1Q8NG31 2342 aa13.43□□□□□ -0.26
NUP54-217ENST00000514987 TRBV5-7A0A0A0MS05 114 aa13.43□□□□□ -0.26
NUP54-217ENST00000514987 TRABD2BA6NFA1 517 aa13.43□□□□□ -0.26
NUP54-217ENST00000514987 TVP23AA6NH52 213 aa13.43□□□□□ -0.26
NUP54-217ENST00000514987 A6NIZ1 184 aa13.43□□□□□ -0.26
NUP54-217ENST00000514987 PSMD9O00233 223 aa13.43□□□□□ -0.26
NUP54-217ENST00000514987 DCTN6O00399 190 aa13.43□□□□□ -0.26
NUP54-217ENST00000514987 GPR171O14626 319 aa13.43□□□□□ -0.26
NUP54-217ENST00000514987 KHNYNO15037 678 aaKnown RBP13.43□□□□□ -0.26
NUP54-217ENST00000514987 SCO2O43819 266 aa13.43□□□□□ -0.26
NUP54-217ENST00000514987 AKR7A3O95154 331 aa13.43□□□□□ -0.26
NUP54-217ENST00000514987 CD3GP09693 182 aa13.43□□□□□ -0.26
NUP54-217ENST00000514987 NAGAP17050 411 aa13.43□□□□□ -0.26
NUP54-217ENST00000514987 STOMP27105 288 aa13.43□□□□□ -0.26
NUP54-217ENST00000514987 CRABP1P29762 137 aa13.43□□□□□ -0.26
NUP54-217ENST00000514987 ART1P52961 327 aa13.43□□□□□ -0.26
NUP54-217ENST00000514987 RAP1BP61224 184 aa13.43□□□□□ -0.26
NUP54-217ENST00000514987 RAP1AP62834 184 aa13.43□□□□□ -0.26
NUP54-217ENST00000514987 C17orf67Q0P5P2 114 aa13.43□□□□□ -0.26
NUP54-217ENST00000514987 KLF9Q13886 244 aaPredicted RBP13.43□□□□□ -0.26
NUP54-217ENST00000514987 ANGPT1Q15389 498 aa13.43□□□□□ -0.26
NUP54-217ENST00000514987 TOMM34Q15785 309 aaPredicted RBP13.43□□□□□ -0.26
NUP54-217ENST00000514987 HES5Q5TA89 166 aa13.43□□□□□ -0.26
NUP54-217ENST00000514987 CD276Q5ZPR3 534 aa13.43□□□□□ -0.26
NUP54-217ENST00000514987 SLC18B1Q6NT16 456 aa13.43□□□□□ -0.26
NUP54-217ENST00000514987 KCTD18Q6PI47 426 aaPredicted RBP13.43□□□□□ -0.26
NUP54-217ENST00000514987 BTN2A1Q7KYR7 527 aa13.43□□□□□ -0.26
NUP54-217ENST00000514987 PM20D2Q8IYS1 436 aa13.43□□□□□ -0.26
NUP54-217ENST00000514987 SIX5Q8N196 739 aa13.43□□□□□ -0.26
NUP54-217ENST00000514987 ZNF454Q8N9F8 522 aa13.43□□□□□ -0.26
NUP54-217ENST00000514987 ZNF248Q8NDW4 579 aa13.43□□□□□ -0.26
NUP54-217ENST00000514987 HLA-CQ95604 372 aa13.43□□□□□ -0.26
NUP54-217ENST00000514987 SLC25A36Q96CQ1 311 aa13.43□□□□□ -0.26
NUP54-217ENST00000514987 DCBLD2Q96PD2 775 aa13.43□□□□□ -0.26
NUP54-217ENST00000514987 GFM1Q96RP9 751 aaKnown RBP13.43□□□□□ -0.26
NUP54-217ENST00000514987 ELF4Q99607 663 aaPredicted RBP13.43□□□□□ -0.26
NUP54-217ENST00000514987 GFI1Q99684 422 aa13.43□□□□□ -0.26
NUP54-217ENST00000514987 BEX2Q9BXY8 128 aa13.43□□□□□ -0.26
NUP54-217ENST00000514987 PTTG3PQ9NZH4 202 aa13.43□□□□□ -0.26
NUP54-217ENST00000514987 KLHL9Q9P2J3 617 aa13.43□□□□□ -0.26
NUP54-217ENST00000514987 B9D1Q9UPM9 204 aa13.43□□□□□ -0.26
NUP54-217ENST00000514987 A0A0B4J203 849 aa13.42□□□□□ -0.26
NUP54-217ENST00000514987 ANKUB1A6NFN9 424 aa13.42□□□□□ -0.26
NUP54-217ENST00000514987 C4orf47A7E2U8 309 aa13.42□□□□□ -0.26
NUP54-217ENST00000514987 PLPP3O14495 311 aa13.42□□□□□ -0.26
NUP54-217ENST00000514987 CFPP27918 469 aa13.42□□□□□ -0.26
NUP54-217ENST00000514987 RCVRNP35243 200 aa13.42□□□□□ -0.26
NUP54-217ENST00000514987 MAP2K6P52564 334 aa13.42□□□□□ -0.26
NUP54-217ENST00000514987 ZP4Q12836 540 aa13.42□□□□□ -0.26
NUP54-217ENST00000514987 ACKR1Q16570 336 aa13.42□□□□□ -0.26
NUP54-217ENST00000514987 BCL2L15Q5TBC7 163 aa13.42□□□□□ -0.26
NUP54-217ENST00000514987 PTCRAQ6ISU1 281 aaPredicted RBP13.42□□□□□ -0.26
NUP54-217ENST00000514987 POMZP3Q6PJE2 187 aa13.42□□□□□ -0.26
NUP54-217ENST00000514987 COX15Q7KZN9 410 aa13.42□□□□□ -0.26
NUP54-217ENST00000514987 DPY19L4Q7Z388 723 aa13.42□□□□□ -0.26
NUP54-217ENST00000514987 PRSS58Q8IYP2 241 aa13.42□□□□□ -0.26
NUP54-217ENST00000514987 NUBPLQ8TB37 319 aa13.42□□□□□ -0.26
NUP54-217ENST00000514987 STT3BQ8TCJ2 826 aa13.42□□□□□ -0.26
NUP54-217ENST00000514987 FCAMRQ8WWV6 532 aa13.42□□□□□ -0.26
NUP54-217ENST00000514987 DEDD2Q8WXF8 326 aa13.42□□□□□ -0.26
NUP54-217ENST00000514987 MIB2Q96AX9 1013 aa13.42□□□□□ -0.26
NUP54-217ENST00000514987 HYLS1Q96M11 299 aa13.42□□□□□ -0.26
NUP54-217ENST00000514987 OR8B4Q96RC9 309 aa13.42□□□□□ -0.26
NUP54-217ENST00000514987 KLHDC3Q9BQ90 382 aa13.42□□□□□ -0.26
NUP54-217ENST00000514987 IER2Q9BTL4 223 aa13.42□□□□□ -0.26
NUP54-217ENST00000514987 SLC25A18Q9H1K4 315 aa13.42□□□□□ -0.26
NUP54-217ENST00000514987 GHITMQ9H3K2 345 aa13.42□□□□□ -0.26
NUP54-217ENST00000514987 LIN7BQ9HAP6 207 aa13.42□□□□□ -0.26
NUP54-217ENST00000514987 GALNT9Q9HCQ5 603 aa13.42□□□□□ -0.26
NUP54-217ENST00000514987 EMC7Q9NPA0 242 aa13.42□□□□□ -0.26
NUP54-217ENST00000514987 NUDT15Q9NV35 164 aa13.42□□□□□ -0.26
NUP54-217ENST00000514987 PPIEQ9UNP9 301 aaKnown RBP13.42□□□□□ -0.26
NUP54-217ENST00000514987 SPAG17Q6Q759 2223 aa13.42□□□□□ -0.26
NUP54-217ENST00000514987 EML5Q05BV3 1969 aa13.42□□□□□ -0.26
NUP54-217ENST00000514987 ADAMTS20P59510 1910 aa13.42□□□□□ -0.26
NUP54-217ENST00000514987 A0A0A6YYJ9 748 aa13.41□□□□□ -0.26
NUP54-217ENST00000514987 NPIPB13A6NJU9 1138 aa13.41□□□□□ -0.26
NUP54-217ENST00000514987 ANXA2P2A6NMY6 339 aa13.41□□□□□ -0.26
NUP54-217ENST00000514987 TTLL8A6PVC2 850 aa13.41□□□□□ -0.26
NUP54-217ENST00000514987 NPIPB4C9JG80 1138 aa13.41□□□□□ -0.26
NUP54-217ENST00000514987 C11orf98E9PRG8 122 aa13.41□□□□□ -0.26
NUP54-217ENST00000514987 H7C1C5 153 aa13.41□□□□□ -0.26
NUP54-217ENST00000514987 KRT33AO76009 404 aa13.41□□□□□ -0.26
NUP54-217ENST00000514987 HLA-DQA2P01906 255 aa13.41□□□□□ -0.26
NUP54-217ENST00000514987 ANXA2P07355 339 aaKnown RBP13.41□□□□□ -0.26
NUP54-217ENST00000514987 HEXBP07686 556 aa13.41□□□□□ -0.26
NUP54-217ENST00000514987 H2AFB2P0C5Z0 115 aa13.41□□□□□ -0.26
NUP54-217ENST00000514987 TCEA1P23193 301 aaKnown RBP13.41□□□□□ -0.26
NUP54-217ENST00000514987 SRP9P49458 86 aaKnown RBP13.41□□□□□ -0.26
NUP54-217ENST00000514987 DLX5P56178 289 aa13.41□□□□□ -0.26
NUP54-217ENST00000514987 LCN6P62502 163 aa13.41□□□□□ -0.26
NUP54-217ENST00000514987 ROM1Q03395 351 aa13.41□□□□□ -0.26
NUP54-217ENST00000514987 SLC17A1Q14916 467 aa13.41□□□□□ -0.26
NUP54-217ENST00000514987 FAM205BPQ63HN1 556 aa13.41□□□□□ -0.26
NUP54-217ENST00000514987 PWWP2BQ6NUJ5 590 aa13.41□□□□□ -0.26
NUP54-217ENST00000514987 DNM1P34Q6PK57 102 aa13.41□□□□□ -0.26
NUP54-217ENST00000514987 LANCL3Q6ZV70 420 aa13.41□□□□□ -0.26
NUP54-217ENST00000514987 FCRLAQ7L513 359 aa13.41□□□□□ -0.26
NUP54-217ENST00000514987 LINGO2Q7L985 606 aa13.41□□□□□ -0.26
NUP54-217ENST00000514987 LRRTM1Q86UE6 522 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms