RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 KRT36O76013 467 aa7.19□□□□□ -1.26
NEDD4-210ENST00000513957 UBOX5O94941 541 aa7.19□□□□□ -1.26
NEDD4-210ENST00000513957 HPRP00739 348 aa7.19□□□□□ -1.26
NEDD4-210ENST00000513957 IGHV3-9P01782 118 aa7.19□□□□□ -1.26
NEDD4-210ENST00000513957 IGHG1P01857 330 aa7.19□□□□□ -1.26
NEDD4-210ENST00000513957 IGHMP01871 453 aa7.19□□□□□ -1.26
NEDD4-210ENST00000513957 SAGP10523 405 aaPredicted RBP7.19□□□□□ -1.26
NEDD4-210ENST00000513957 IFI30P13284 250 aa7.19□□□□□ -1.26
NEDD4-210ENST00000513957 FUT1P19526 365 aa7.19□□□□□ -1.26
NEDD4-210ENST00000513957 EDNRAP25101 427 aa7.19□□□□□ -1.26
NEDD4-210ENST00000513957 IFNGR2P38484 337 aa7.19□□□□□ -1.26
NEDD4-210ENST00000513957 VLDLRP98155 873 aa7.19□□□□□ -1.26
NEDD4-210ENST00000513957 ROR2Q01974 943 aaKnown RBP7.19□□□□□ -1.26
NEDD4-210ENST00000513957 RPL18Q07020 188 aaKnown RBP7.19□□□□□ -1.26
NEDD4-210ENST00000513957 ALG10Q5BKT4 473 aa7.19□□□□□ -1.26
NEDD4-210ENST00000513957 ADAM5Q6NVV9 412 aa7.19□□□□□ -1.26
NEDD4-210ENST00000513957 ANKRD16Q6P6B7 361 aa7.19□□□□□ -1.26
NEDD4-210ENST00000513957 PAMR1Q6UXH9 720 aa7.19□□□□□ -1.26
NEDD4-210ENST00000513957 NHLRC1Q6VVB1 395 aa7.19□□□□□ -1.26
NEDD4-210ENST00000513957 RINLQ6ZS11 566 aa7.19□□□□□ -1.26
NEDD4-210ENST00000513957 DPPA2Q7Z7J5 298 aa7.19□□□□□ -1.26
NEDD4-210ENST00000513957 CDH24Q86UP0 819 aa7.19□□□□□ -1.26
NEDD4-210ENST00000513957 DHFR2Q86XF0 187 aa7.19□□□□□ -1.26
NEDD4-210ENST00000513957 AQP12AQ8IXF9 295 aa7.19□□□□□ -1.26
NEDD4-210ENST00000513957 NRMQ8IXM6 262 aa7.19□□□□□ -1.26
NEDD4-210ENST00000513957 C20orf196Q8IYI0 205 aa7.19□□□□□ -1.26
NEDD4-210ENST00000513957 PFN4Q8NHR9 129 aa7.19□□□□□ -1.26
NEDD4-210ENST00000513957 SLC7A13Q8TCU3 470 aa7.19□□□□□ -1.26
NEDD4-210ENST00000513957 ZNF566Q969W8 418 aa7.19□□□□□ -1.26
NEDD4-210ENST00000513957 MBD6Q96DN6 1003 aa7.19□□□□□ -1.26
NEDD4-210ENST00000513957 SLC25A44Q96H78 314 aaPredicted RBP7.19□□□□□ -1.26
NEDD4-210ENST00000513957 ZC3HAV1LQ96H79 300 aaKnown RBP7.19□□□□□ -1.26
NEDD4-210ENST00000513957 LRGUKQ96M69 825 aa7.19□□□□□ -1.26
NEDD4-210ENST00000513957 SEPHS2Q99611 448 aa7.19□□□□□ -1.26
NEDD4-210ENST00000513957 BTBD10Q9BSF8 475 aa7.19□□□□□ -1.26
NEDD4-210ENST00000513957 TMEM204Q9BSN7 226 aa7.19□□□□□ -1.26
NEDD4-210ENST00000513957 DENND2DQ9H6A0 471 aaPredicted RBP7.19□□□□□ -1.26
NEDD4-210ENST00000513957 PLEKHF2Q9H8W4 249 aa7.19□□□□□ -1.26
NEDD4-210ENST00000513957 SMURF2Q9HAU4 748 aa7.19□□□□□ -1.26
NEDD4-210ENST00000513957 SLC17A5Q9NRA2 495 aa7.19□□□□□ -1.26
NEDD4-210ENST00000513957 C20orf141Q9NUB4 165 aa7.19□□□□□ -1.26
NEDD4-210ENST00000513957 SLC25A15Q9Y619 301 aa7.19□□□□□ -1.26
NEDD4-210ENST00000513957 SLC35F4A4IF30 521 aa7.18□□□□□ -1.26
NEDD4-210ENST00000513957 EFCAB9A8MZ26 197 aa7.18□□□□□ -1.26
NEDD4-210ENST00000513957 MCIDASD6RGH6 385 aa7.18□□□□□ -1.26
NEDD4-210ENST00000513957 C11orf98E9PRG8 122 aa7.18□□□□□ -1.26
NEDD4-210ENST00000513957 BLOC1S5-TXNDC5H3BN57 136 aa7.18□□□□□ -1.26
NEDD4-210ENST00000513957 J3KTA2 159 aa7.18□□□□□ -1.26
NEDD4-210ENST00000513957 AHCYL1O43865 530 aa7.18□□□□□ -1.26
NEDD4-210ENST00000513957 GADD45GO95257 159 aa7.18□□□□□ -1.26
NEDD4-210ENST00000513957 BCL10O95999 233 aa7.18□□□□□ -1.26
NEDD4-210ENST00000513957 RAF1P04049 648 aa7.18□□□□□ -1.26
NEDD4-210ENST00000513957 IFNGR1P15260 489 aa7.18□□□□□ -1.26
NEDD4-210ENST00000513957 CBLP22681 906 aa7.18□□□□□ -1.26
NEDD4-210ENST00000513957 PTAFRP25105 342 aa7.18□□□□□ -1.26
NEDD4-210ENST00000513957 LOXP28300 417 aaPredicted RBP7.18□□□□□ -1.26
NEDD4-210ENST00000513957 CSNK1A1P48729 337 aa7.18□□□□□ -1.26
NEDD4-210ENST00000513957 ZNF133P52736 654 aaPredicted RBP7.18□□□□□ -1.26
NEDD4-210ENST00000513957 UBE2NP61088 152 aaKnown RBP7.18□□□□□ -1.26
NEDD4-210ENST00000513957 BNIP1Q12981 228 aa7.18□□□□□ -1.26
NEDD4-210ENST00000513957 IQCCQ4KMZ1 466 aa7.18□□□□□ -1.26
NEDD4-210ENST00000513957 FAM98BQ52LJ0 330 aaKnown RBP7.18□□□□□ -1.26
NEDD4-210ENST00000513957 FGD3Q5JSP0 725 aa7.18□□□□□ -1.26
NEDD4-210ENST00000513957 NCMAPQ5T1S8 102 aa7.18□□□□□ -1.26
NEDD4-210ENST00000513957 ANKRD34AQ69YU3 496 aa7.18□□□□□ -1.26
NEDD4-210ENST00000513957 SEZ6L2Q6UXD5 910 aa7.18□□□□□ -1.26
NEDD4-210ENST00000513957 SLC35D2Q76EJ3 337 aa7.18□□□□□ -1.26
NEDD4-210ENST00000513957 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.18□□□□□ -1.26
NEDD4-210ENST00000513957 TSEN54Q7Z6J9 526 aaKnown RBP7.18□□□□□ -1.26
NEDD4-210ENST00000513957 OAFQ86UD1 273 aa7.18□□□□□ -1.26
NEDD4-210ENST00000513957 WFDC8Q8IUA0 241 aa7.18□□□□□ -1.26
NEDD4-210ENST00000513957 ZDHHC21Q8IVQ6 265 aa7.18□□□□□ -1.26
NEDD4-210ENST00000513957 KDM8Q8N371 416 aa7.18□□□□□ -1.26
NEDD4-210ENST00000513957 FAM86B1Q8N7N1 296 aa7.18□□□□□ -1.26
NEDD4-210ENST00000513957 OR1K1Q8NGR3 316 aa7.18□□□□□ -1.26
NEDD4-210ENST00000513957 NANOS1Q8WY41 292 aaKnown RBP7.18□□□□□ -1.26
NEDD4-210ENST00000513957 PIK3IP1Q96FE7 263 aa7.18□□□□□ -1.26
NEDD4-210ENST00000513957 RCC1LQ96I51 464 aaKnown RBP7.18□□□□□ -1.26
NEDD4-210ENST00000513957 GPX7Q96SL4 187 aaPredicted RBP7.18□□□□□ -1.26
NEDD4-210ENST00000513957 THTPAQ9BU02 230 aa7.18□□□□□ -1.26
NEDD4-210ENST00000513957 ULBP2Q9BZM5 246 aa7.18□□□□□ -1.26
NEDD4-210ENST00000513957 CRLF2Q9HC73 371 aa7.18□□□□□ -1.26
NEDD4-210ENST00000513957 INIPQ9NRY2 104 aa7.18□□□□□ -1.26
NEDD4-210ENST00000513957 ST6GALNAC2Q9UJ37 374 aa7.18□□□□□ -1.26
NEDD4-210ENST00000513957 FBXL3Q9UKT7 428 aa7.18□□□□□ -1.26
NEDD4-210ENST00000513957 RNF115Q9Y4L5 304 aa7.18□□□□□ -1.26
NEDD4-210ENST00000513957 PRR14LQ5THK1 2151 aa7.18□□□□□ -1.26
NEDD4-210ENST00000513957 TCRBV5S2A0A599 114 aa7.17□□□□□ -1.26
NEDD4-210ENST00000513957 SH3PXD2BA1X283 911 aa7.17□□□□□ -1.26
NEDD4-210ENST00000513957 A6NIZ1 184 aa7.17□□□□□ -1.26
NEDD4-210ENST00000513957 CYSRT1A8MQ03 144 aa7.17□□□□□ -1.26
NEDD4-210ENST00000513957 hCG_2039718K7EN88 272 aa7.17□□□□□ -1.26
NEDD4-210ENST00000513957 CLOCKO15516 846 aa7.17□□□□□ -1.26
NEDD4-210ENST00000513957 UPK3AO75631 287 aa7.17□□□□□ -1.26
NEDD4-210ENST00000513957 CD3EP07766 207 aa7.17□□□□□ -1.26
NEDD4-210ENST00000513957 PGA4P0DJD7 388 aa7.17□□□□□ -1.26
NEDD4-210ENST00000513957 PGA3P0DJD8 388 aa7.17□□□□□ -1.26
NEDD4-210ENST00000513957 RAP2AP10114 183 aa7.17□□□□□ -1.26
NEDD4-210ENST00000513957 HLA-DOBP13765 273 aa7.17□□□□□ -1.26
NEDD4-210ENST00000513957 APEHP13798 732 aaKnown RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms