RNA–Protein interactions for RNA: ENST00000513495.5

SH3TC1-223, Transcript of SH3 domain and tetratricopeptide repeats 1, human

TSL 4

Gene SH3TC1, Length 600 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SH3TC1-223	ENST00000513495	SOCS2	O14508	198 aa		13.92	□□□□□ -0.18
SH3TC1-223	ENST00000513495	CASQ2	O14958	399 aa	Predicted RBP	13.92	□□□□□ -0.18
SH3TC1-223	ENST00000513495	ARHGEF9	O43307	516 aa		13.92	□□□□□ -0.18
SH3TC1-223	ENST00000513495	ZNF432	O94892	652 aa		13.92	□□□□□ -0.18
SH3TC1-223	ENST00000513495	ATP6V1G2	O95670	118 aa		13.92	□□□□□ -0.18
SH3TC1-223	ENST00000513495	TXNDC12	O95881	172 aa		13.92	□□□□□ -0.18
SH3TC1-223	ENST00000513495	REN	P00797	406 aa		13.92	□□□□□ -0.18
SH3TC1-223	ENST00000513495	CGA	P01215	116 aa		13.92	□□□□□ -0.18
SH3TC1-223	ENST00000513495	IGHV3-9	P01782	118 aa		13.92	□□□□□ -0.18
SH3TC1-223	ENST00000513495	HMGN1	P05114	100 aa		13.92	□□□□□ -0.18
SH3TC1-223	ENST00000513495	ZNF26	P17031	533 aa	Predicted RBP	13.92	□□□□□ -0.18
SH3TC1-223	ENST00000513495	MYBPC1	Q00872	1141 aa		13.92	□□□□□ -0.18
SH3TC1-223	ENST00000513495	TGFBR3	Q03167	851 aa		13.92	□□□□□ -0.18
SH3TC1-223	ENST00000513495	CD47	Q08722	323 aa		13.92	□□□□□ -0.18
SH3TC1-223	ENST00000513495	FAP	Q12884	760 aa		13.92	□□□□□ -0.18
SH3TC1-223	ENST00000513495		Q6ZT83	130 aa		13.92	□□□□□ -0.18
SH3TC1-223	ENST00000513495	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	13.92	□□□□□ -0.18
SH3TC1-223	ENST00000513495	FAM122B	Q7Z309	247 aa		13.92	□□□□□ -0.18
SH3TC1-223	ENST00000513495	C20orf196	Q8IYI0	205 aa		13.92	□□□□□ -0.18
SH3TC1-223	ENST00000513495	TMEM123	Q8N131	208 aa		13.92	□□□□□ -0.18
SH3TC1-223	ENST00000513495	LNX2	Q8N448	690 aa		13.92	□□□□□ -0.18
SH3TC1-223	ENST00000513495	RELL2	Q8NC24	303 aa	Predicted RBP	13.92	□□□□□ -0.18
SH3TC1-223	ENST00000513495	NOXO1	Q8NFA2	376 aa		13.92	□□□□□ -0.18
SH3TC1-223	ENST00000513495		Q96M85	177 aa		13.92	□□□□□ -0.18
SH3TC1-223	ENST00000513495	SLC38A2	Q96QD8	506 aa		13.92	□□□□□ -0.18
SH3TC1-223	ENST00000513495	RBM24	Q9BX46	236 aa	Known RBP	13.92	□□□□□ -0.18
SH3TC1-223	ENST00000513495	PLA2G12A	Q9BZM1	189 aa		13.92	□□□□□ -0.18
SH3TC1-223	ENST00000513495	ULBP2	Q9BZM5	246 aa		13.92	□□□□□ -0.18
SH3TC1-223	ENST00000513495	ENKD1	Q9H0I2	346 aa		13.92	□□□□□ -0.18
SH3TC1-223	ENST00000513495	RIBC2	Q9H4K1	309 aa		13.92	□□□□□ -0.18
SH3TC1-223	ENST00000513495	MALT1	Q9UDY8	824 aa		13.92	□□□□□ -0.18
SH3TC1-223	ENST00000513495	KLHL21	Q9UJP4	597 aa		13.92	□□□□□ -0.18
SH3TC1-223	ENST00000513495	MITF	O75030	526 aa	Predicted RBP	13.91	□□□□□ -0.18
SH3TC1-223	ENST00000513495	TRMU	O75648	421 aa	Known RBP	13.91	□□□□□ -0.18
SH3TC1-223	ENST00000513495	ZNF3	P17036	446 aa		13.91	□□□□□ -0.18
SH3TC1-223	ENST00000513495	PEX2	P28328	305 aa		13.91	□□□□□ -0.18
SH3TC1-223	ENST00000513495	GRK5	P34947	590 aa		13.91	□□□□□ -0.18
SH3TC1-223	ENST00000513495	GIPR	P48546	466 aa		13.91	□□□□□ -0.18
SH3TC1-223	ENST00000513495	ZNF84	P51523	738 aa		13.91	□□□□□ -0.18
SH3TC1-223	ENST00000513495	SH3BGR	P55822	239 aa	Predicted RBP	13.91	□□□□□ -0.18
SH3TC1-223	ENST00000513495	NPRL3	Q12980	569 aa		13.91	□□□□□ -0.18
SH3TC1-223	ENST00000513495	GINS1	Q14691	196 aa		13.91	□□□□□ -0.18
SH3TC1-223	ENST00000513495	PGGHG	Q32M88	737 aa		13.91	□□□□□ -0.18
SH3TC1-223	ENST00000513495	TSPO2	Q5TGU0	170 aa		13.91	□□□□□ -0.18
SH3TC1-223	ENST00000513495	LPCAT4	Q643R3	524 aa		13.91	□□□□□ -0.18
SH3TC1-223	ENST00000513495	ANKRD34A	Q69YU3	496 aa		13.91	□□□□□ -0.18
SH3TC1-223	ENST00000513495	DNM1P34	Q6PK57	102 aa		13.91	□□□□□ -0.18
SH3TC1-223	ENST00000513495	NHLRC1	Q6VVB1	395 aa		13.91	□□□□□ -0.18
SH3TC1-223	ENST00000513495	SYT14	Q8NB59	555 aa		13.91	□□□□□ -0.18
SH3TC1-223	ENST00000513495	OR8D4	Q8NGM9	314 aa		13.91	□□□□□ -0.18
SH3TC1-223	ENST00000513495	ZNF519	Q8TB69	540 aa		13.91	□□□□□ -0.18
SH3TC1-223	ENST00000513495	RASD2	Q96D21	266 aa		13.91	□□□□□ -0.18
SH3TC1-223	ENST00000513495	RDH12	Q96NR8	316 aa		13.91	□□□□□ -0.18
SH3TC1-223	ENST00000513495	HDHD5	Q9BXW7	423 aa		13.91	□□□□□ -0.18
SH3TC1-223	ENST00000513495	SLC25A19	Q9HC21	320 aa		13.91	□□□□□ -0.18
SH3TC1-223	ENST00000513495	SLC7A10	Q9NS82	523 aa		13.91	□□□□□ -0.18
SH3TC1-223	ENST00000513495	GLTP	Q9NZD2	209 aa		13.91	□□□□□ -0.18
SH3TC1-223	ENST00000513495	JKAMP	Q9P055	326 aa		13.91	□□□□□ -0.18
SH3TC1-223	ENST00000513495	NKX1-2	Q9UD57	310 aa	Predicted RBP	13.91	□□□□□ -0.18
SH3TC1-223	ENST00000513495	PRSS50	Q9UI38	385 aa		13.91	□□□□□ -0.18
SH3TC1-223	ENST00000513495	TMEFF2	Q9UIK5	374 aa	Predicted RBP	13.91	□□□□□ -0.18
SH3TC1-223	ENST00000513495	PRSS37	A4D1T9	235 aa		13.9	□□□□□ -0.18
SH3TC1-223	ENST00000513495	BHLHE40	O14503	412 aa		13.9	□□□□□ -0.18
SH3TC1-223	ENST00000513495	TP53	P04637	393 aa	Predicted RBP	13.9	□□□□□ -0.18
SH3TC1-223	ENST00000513495	IGFBP1	P08833	259 aa	Predicted RBP	13.9	□□□□□ -0.18
SH3TC1-223	ENST00000513495	PGA4	P0DJD7	388 aa		13.9	□□□□□ -0.18
SH3TC1-223	ENST00000513495	PGA3	P0DJD8	388 aa		13.9	□□□□□ -0.18
SH3TC1-223	ENST00000513495	PAICS	P22234	425 aa	Known RBP	13.9	□□□□□ -0.18
SH3TC1-223	ENST00000513495	NTF4	P34130	210 aa		13.9	□□□□□ -0.18
SH3TC1-223	ENST00000513495	CD79B	P40259	229 aa		13.9	□□□□□ -0.18
SH3TC1-223	ENST00000513495	GUCA1A	P43080	201 aa	Predicted RBP	13.9	□□□□□ -0.18
SH3TC1-223	ENST00000513495	ROR2	Q01974	943 aa	Known RBP	13.9	□□□□□ -0.18
SH3TC1-223	ENST00000513495	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	13.9	□□□□□ -0.18
SH3TC1-223	ENST00000513495	FBXL19-AS1	Q494R0	122 aa		13.9	□□□□□ -0.18
SH3TC1-223	ENST00000513495	THEM4	Q5T1C6	240 aa		13.9	□□□□□ -0.18
SH3TC1-223	ENST00000513495	SLC35F1	Q5T1Q4	408 aa		13.9	□□□□□ -0.18
SH3TC1-223	ENST00000513495	OGFRL1	Q5TC84	451 aa	Predicted RBP	13.9	□□□□□ -0.18
SH3TC1-223	ENST00000513495	GALNT4	Q8N4A0	578 aa		13.9	□□□□□ -0.18
SH3TC1-223	ENST00000513495	ZNF555	Q8NEP9	628 aa		13.9	□□□□□ -0.18
SH3TC1-223	ENST00000513495	OR52E2	Q8NGJ4	325 aa		13.9	□□□□□ -0.18
SH3TC1-223	ENST00000513495	RNASE6	Q93091	150 aa	Known RBP	13.9	□□□□□ -0.18
SH3TC1-223	ENST00000513495	TMEM54	Q969K7	222 aa		13.9	□□□□□ -0.18
SH3TC1-223	ENST00000513495	ALKBH3	Q96Q83	286 aa	Predicted RBP	13.9	□□□□□ -0.18
SH3TC1-223	ENST00000513495	SNX18	Q96RF0	628 aa		13.9	□□□□□ -0.18
SH3TC1-223	ENST00000513495	KCNK17	Q96T54	332 aa		13.9	□□□□□ -0.18
SH3TC1-223	ENST00000513495	USB1	Q9BQ65	265 aa	Known RBP	13.9	□□□□□ -0.18
SH3TC1-223	ENST00000513495	GABARAPL3	Q9BY60	117 aa		13.9	□□□□□ -0.18
SH3TC1-223	ENST00000513495	CRLF2	Q9HC73	371 aa		13.9	□□□□□ -0.18
SH3TC1-223	ENST00000513495	SMPD3	Q9NY59	655 aa	Predicted RBP	13.9	□□□□□ -0.18
SH3TC1-223	ENST00000513495	TAS2R16	Q9NYV7	291 aa		13.9	□□□□□ -0.18
SH3TC1-223	ENST00000513495	SPEN	Q96T58	3664 aa	Known RBP	13.9	□□□□□ -0.18
SH3TC1-223	ENST00000513495	SMG1	Q96Q15	3661 aa	Known RBP	13.89	□□□□□ -0.19
SH3TC1-223	ENST00000513495	CIB4	A0PJX0	185 aa		13.89	□□□□□ -0.19
SH3TC1-223	ENST00000513495	NKX2-6	A6NCS4	301 aa		13.89	□□□□□ -0.19
SH3TC1-223	ENST00000513495	WIPF3	A6NGB9	483 aa		13.89	□□□□□ -0.19
SH3TC1-223	ENST00000513495	UPK3A	O75631	287 aa		13.89	□□□□□ -0.19
SH3TC1-223	ENST00000513495	QDPR	P09417	244 aa		13.89	□□□□□ -0.19
SH3TC1-223	ENST00000513495	HIST1H1C	P16403	213 aa	Known RBP	13.89	□□□□□ -0.19
SH3TC1-223	ENST00000513495	IL32	P24001	234 aa		13.89	□□□□□ -0.19
SH3TC1-223	ENST00000513495	MPG	P29372	298 aa		13.89	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms