RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 PGCP20142 388 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 CD38P28907 300 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 SNRPEP62304 92 aaKnown RBP10.37□□□□□ -0.75
TCOF1-211ENST00000513346 PPA1Q15181 289 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 TUSC1Q2TAM9 212 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 SLC25A35Q3KQZ1 300 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 OLIG3Q7RTU3 272 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 SYT9Q86SS6 491 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 LMNTD1Q8N9Z9 388 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 ZNF740Q8NDX6 193 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 CXorf58Q96LI9 332 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 HHLA2Q9UM44 414 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 A0A087WZY1 265 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 PRSS38A1L453 326 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 EFCAB7A8K855 629 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 HMGB3O15347 200 aaKnown RBP10.37□□□□□ -0.75
TCOF1-211ENST00000513346 IL33O95760 270 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 EPXP11678 715 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 LIM2P55344 173 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 MLF2Q15773 248 aaPredicted RBP10.37□□□□□ -0.75
TCOF1-211ENST00000513346 LINC00303Q3SY05 128 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 DCST2Q5T1A1 773 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 GPR157Q5UAW9 335 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 ZNF620Q6ZNG0 422 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 HIST2H3AQ71DI3 136 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 TMPRSS9Q7Z410 1059 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 TRAPPC6BQ86SZ2 158 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 NKAIN4Q8IVV8 208 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 BAP18Q8IXM2 172 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 UBALD2Q8IYN6 164 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 DNAJA3Q96EY1 480 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 MYADMQ96S97 322 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 USB1Q9BQ65 265 aaKnown RBP10.37□□□□□ -0.75
TCOF1-211ENST00000513346 GLIPR2Q9H4G4 154 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 EVA1AQ9H8M9 152 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 SLC22A11Q9NSA0 550 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 COL4A5P29400 1685 aa10.36□□□□□ -0.75
TCOF1-211ENST00000513346 BCL2L11O43521 198 aa10.36□□□□□ -0.75
TCOF1-211ENST00000513346 HIST1H1TP22492 207 aaPredicted RBP10.36□□□□□ -0.75
TCOF1-211ENST00000513346 KIAA0040Q15053 153 aa10.36□□□□□ -0.75
TCOF1-211ENST00000513346 FAM27D1Q5T7N8 215 aa10.36□□□□□ -0.75
TCOF1-211ENST00000513346 TRILQ7L0X0 811 aa10.36□□□□□ -0.75
TCOF1-211ENST00000513346 KDM8Q8N371 416 aa10.36□□□□□ -0.75
TCOF1-211ENST00000513346 IL17RCQ8NAC3 791 aa10.36□□□□□ -0.75
TCOF1-211ENST00000513346 RHBDD1Q8TEB9 315 aa10.36□□□□□ -0.75
TCOF1-211ENST00000513346 SLAMF9Q96A28 289 aa10.36□□□□□ -0.75
TCOF1-211ENST00000513346 TIMM29Q9BSF4 260 aa10.36□□□□□ -0.75
TCOF1-211ENST00000513346 SEMA4CQ9C0C4 833 aa10.36□□□□□ -0.75
TCOF1-211ENST00000513346 TAAR2Q9P1P5 351 aa10.36□□□□□ -0.75
TCOF1-211ENST00000513346 REV1Q9UBZ9 1251 aa10.36□□□□□ -0.75
TCOF1-211ENST00000513346 EP400Q96L91 3159 aa10.36□□□□□ -0.75
TCOF1-211ENST00000513346 A0A0J9YY10 115 aa10.36□□□□□ -0.75
TCOF1-211ENST00000513346 TMEM72A0PK05 275 aa10.36□□□□□ -0.75
TCOF1-211ENST00000513346 RFPL4AA6NLU0 287 aa10.36□□□□□ -0.75
TCOF1-211ENST00000513346 RFPL4AL1F8VTS6 287 aa10.36□□□□□ -0.75
TCOF1-211ENST00000513346 HMGN4O00479 90 aa10.36□□□□□ -0.75
TCOF1-211ENST00000513346 HTR3BO95264 441 aa10.36□□□□□ -0.75
TCOF1-211ENST00000513346 DCTDP32321 178 aa10.36□□□□□ -0.75
TCOF1-211ENST00000513346 OR2B8PP59922 312 aa10.36□□□□□ -0.75
TCOF1-211ENST00000513346 ZNF273Q14593 569 aa10.36□□□□□ -0.75
TCOF1-211ENST00000513346 NIPAL3Q6P499 406 aa10.36□□□□□ -0.75
TCOF1-211ENST00000513346 RNF165Q6ZSG1 346 aa10.36□□□□□ -0.75
TCOF1-211ENST00000513346 ZNF283Q8N7M2 679 aa10.36□□□□□ -0.75
TCOF1-211ENST00000513346 OR4C15Q8NGM1 316 aa10.36□□□□□ -0.75
TCOF1-211ENST00000513346 OR5M1Q8NGP8 315 aa10.36□□□□□ -0.75
TCOF1-211ENST00000513346 OR6S1Q8NH40 331 aa10.36□□□□□ -0.75
TCOF1-211ENST00000513346 SERINC2Q96SA4 455 aa10.36□□□□□ -0.75
TCOF1-211ENST00000513346 NPAS1Q99742 590 aa10.36□□□□□ -0.75
TCOF1-211ENST00000513346 PBX4Q9BYU1 374 aa10.36□□□□□ -0.75
TCOF1-211ENST00000513346 MS4A7Q9GZW8 240 aaPredicted RBP10.36□□□□□ -0.75
TCOF1-211ENST00000513346 GPATCH2Q9NW75 528 aa10.36□□□□□ -0.75
TCOF1-211ENST00000513346 NUP214P35658 2090 aaPredicted RBP10.36□□□□□ -0.75
TCOF1-211ENST00000513346 IFITM5A6NNB3 132 aa10.36□□□□□ -0.75
TCOF1-211ENST00000513346 H7C1Q1 480 aa10.36□□□□□ -0.75
TCOF1-211ENST00000513346 SLC2A10O95528 541 aa10.36□□□□□ -0.75
TCOF1-211ENST00000513346 WNT1P04628 370 aa10.36□□□□□ -0.75
TCOF1-211ENST00000513346 CCNOP22674 350 aa10.36□□□□□ -0.75
TCOF1-211ENST00000513346 SERTAD2Q14140 314 aa10.36□□□□□ -0.75
TCOF1-211ENST00000513346 NFATC4Q14934 902 aa10.36□□□□□ -0.75
TCOF1-211ENST00000513346 MRPL2Q5T653 305 aaKnown RBP10.36□□□□□ -0.75
TCOF1-211ENST00000513346 HIST2H3PS2Q5TEC6 136 aa10.36□□□□□ -0.75
TCOF1-211ENST00000513346 TMEM71Q6P5X7 295 aa10.36□□□□□ -0.75
TCOF1-211ENST00000513346 DPPA2Q7Z7J5 298 aa10.36□□□□□ -0.75
TCOF1-211ENST00000513346 BBS1Q8NFJ9 593 aa10.36□□□□□ -0.75
TCOF1-211ENST00000513346 OR11H7Q8NGC8 314 aa10.36□□□□□ -0.75
TCOF1-211ENST00000513346 OR52B4Q8NGK2 314 aa10.36□□□□□ -0.75
TCOF1-211ENST00000513346 FBLIM1Q8WUP2 373 aa10.36□□□□□ -0.75
TCOF1-211ENST00000513346 PTP4A1Q93096 173 aa10.36□□□□□ -0.75
TCOF1-211ENST00000513346 AMDHD1Q96NU7 426 aa10.36□□□□□ -0.75
TCOF1-211ENST00000513346 ISG20L2Q9H9L3 353 aaKnown RBP10.36□□□□□ -0.75
TCOF1-211ENST00000513346 CBY1Q9Y3M2 126 aa10.36□□□□□ -0.75
TCOF1-211ENST00000513346 ZNF337Q9Y3M9 751 aa10.36□□□□□ -0.75
TCOF1-211ENST00000513346 TCRBV16S1A1N1A0A5B0 115 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 ZC3H12DA2A288 527 aaKnown RBP10.35□□□□□ -0.75
TCOF1-211ENST00000513346 VSTM5A8MXK1 200 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 SURF4O15260 269 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 SULT1A3P0DMM9 295 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 SULT1A4P0DMN0 295 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 ZNF44P15621 663 aa10.35□□□□□ -0.75
TCOF1-211ENST00000513346 HTR2CP28335 458 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms