RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 LRIG3Q6UXM1 1119 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 APOOLQ6UXV4 268 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 C9orf139Q6ZV77 190 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 FAM57BQ71RH2 274 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 MTERF4Q7Z6M4 381 aaKnown RBP3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 KLBQ86Z14 1044 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 METTL4Q8N3J2 472 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 KIR3DL3Q8N743 410 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 L3MBTL4Q8NA19 623 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 CEP70Q8NHQ1 597 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 STAG3L4Q8TBR4 150 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 WDR20Q8TBZ3 569 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 ZFP90Q8TF47 636 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 ANKRD49Q8WVL7 239 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 ESAMQ96AP7 390 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 TM4SF18Q96CE8 201 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 CERS2Q96G23 380 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 C1orf147Q96MC9 270 aaPredicted RBP3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 RNF145Q96MT1 663 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 SLC30A2Q9BRI3 323 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 FAIM2Q9BWQ8 316 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 TM2D2Q9BX73 214 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 C1QTNF6Q9BXI9 259 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 SRXN1Q9BYN0 137 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 ZNF385DQ9H6B1 395 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 ZNF665Q9H7R5 613 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 LPAR2Q9HBW0 351 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 PAPOLBQ9NRJ5 636 aaKnown RBP3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 MED17Q9NVC6 651 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 CD274Q9NZQ7 290 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 CRNNQ9UBG3 495 aaPredicted RBP3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 OPTCQ9UBM4 332 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 OPN4Q9UHM6 478 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 ICAM5Q9UMF0 924 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 NOSIPQ9Y314 301 aaKnown RBP3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 DYNC2H1Q8NCM8 4307 aaKnown RBP3.09□□□□□ -1.92
PDLIM5-218ENST00000513341 DNAH1Q9P2D7 4330 aa3.09□□□□□ -1.92
PDLIM5-218ENST00000513341 IGHV1-18A0A0C4DH31 117 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 A0A1W2PR80 420 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 C9JVG2 144 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 LYNX1G3V0Z9 82 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 C3orf84H3BNL1 204 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 PPIHO43447 177 aaKnown RBP3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 WISP3O95389 354 aaPredicted RBP3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 UTS2O95399 124 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 CLDN9O95484 217 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 OPN1MWP04001 364 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 GBAP04062 536 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 KLK1P06870 262 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 IGFBP1P08833 259 aaPredicted RBP3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 ADRA2AP08913 450 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 OPN1MW2P0DN77 364 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 OPN1MW3P0DN78 364 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 LYNX1P0DP58 116 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 CD1DP15813 335 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 EDNRAP25101 427 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 PCGF2P35227 344 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 SFTPDP35247 375 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 CRYBB2P43320 205 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 CLK1P49759 484 aaKnown RBP3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 RAG2P55895 527 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 TAS2R39P59534 338 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 KRTAP10-3P60369 221 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 NAAAQ02083 359 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 SLC18A2Q05940 514 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 SELENBP1Q13228 472 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 HEPACAMQ14CZ8 416 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 C2orf68Q2NKX9 166 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 VPS26BQ4G0F5 336 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 SLC25A53Q5H9E4 307 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 KLHL24Q6TFL4 600 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 TMPPEQ6ZT21 453 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 SPATA21Q7Z572 469 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 ABHD12BQ7Z5M8 362 aaPredicted RBP3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 ZC3HC1Q86WB0 502 aaKnown RBP3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 VSTM4Q8IW00 320 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 ZCCHC24Q8N2G6 241 aaKnown RBP3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 RNF175Q8N4F7 328 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 MMGT1Q8N4V1 131 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 TMEM86BQ8N661 226 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 CEP112Q8N8E3 955 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 NAT8LQ8N9F0 302 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 OR7G2Q8NG99 324 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 MAGEE2Q8TD90 523 aaPredicted RBP3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 UBTD2Q8WUN7 234 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 CKAP2Q8WWK9 683 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 C22orf15Q8WYQ4 148 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 KLHL29Q96CT2 875 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 ZHX1-C8orf76Q96EF9 292 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 SLC38A2Q96QD8 506 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 NAP1L3Q99457 506 aaPredicted RBP3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 LMF2Q9BU23 707 aaKnown RBP3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 C1QTNF5Q9BXJ0 243 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 TRIM31Q9BZY9 425 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 TMEM185BQ9H7F4 350 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 COQ10BQ9H8M1 238 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 PLEKHA2Q9HB19 425 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 DYNLRB1Q9NP97 96 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 NOX4Q9NPH5 578 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms