RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 APOL4Q9BPW4 351 aa11.11□□□□□ -0.63
PDPN-210ENST00000513143 VKORC1Q9BQB6 163 aa11.11□□□□□ -0.63
PDPN-210ENST00000513143 MRPL13Q9BYD1 178 aaKnown RBP11.11□□□□□ -0.63
PDPN-210ENST00000513143 ANKRD60Q9BZ19 345 aa11.11□□□□□ -0.63
PDPN-210ENST00000513143 PARPBPQ9NWS1 579 aa11.11□□□□□ -0.63
PDPN-210ENST00000513143 OSGIN2Q9Y236 505 aa11.11□□□□□ -0.63
PDPN-210ENST00000513143 LRRC42Q9Y546 428 aa11.11□□□□□ -0.63
PDPN-210ENST00000513143 TRGV8A0A0C4DH27 118 aa11.1□□□□□ -0.63
PDPN-210ENST00000513143 PRSS37A4D1T9 235 aa11.1□□□□□ -0.63
PDPN-210ENST00000513143 AHCYL1O43865 530 aa11.1□□□□□ -0.63
PDPN-210ENST00000513143 MRPL33O75394 65 aaKnown RBP11.1□□□□□ -0.63
PDPN-210ENST00000513143 IL2RAP01589 272 aa11.1□□□□□ -0.63
PDPN-210ENST00000513143 IGHG1P01857 330 aa11.1□□□□□ -0.63
PDPN-210ENST00000513143 PGA4P0DJD7 388 aa11.1□□□□□ -0.63
PDPN-210ENST00000513143 PGA3P0DJD8 388 aa11.1□□□□□ -0.63
PDPN-210ENST00000513143 ZNF3P17036 446 aa11.1□□□□□ -0.63
PDPN-210ENST00000513143 KIR2DL2P43627 348 aaPredicted RBP11.1□□□□□ -0.63
PDPN-210ENST00000513143 SELENOPP49908 381 aa11.1□□□□□ -0.63
PDPN-210ENST00000513143 PER3P56645 1201 aa11.1□□□□□ -0.63
PDPN-210ENST00000513143 SNRPGP62308 76 aaKnown RBP11.1□□□□□ -0.63
PDPN-210ENST00000513143 ITGADQ13349 1161 aa11.1□□□□□ -0.63
PDPN-210ENST00000513143 CAMK2DQ13557 499 aa11.1□□□□□ -0.63
PDPN-210ENST00000513143 HIST3H3Q16695 136 aa11.1□□□□□ -0.63
PDPN-210ENST00000513143 RIPPLY2Q5TAB7 128 aa11.1□□□□□ -0.63
PDPN-210ENST00000513143 NIPAL3Q6P499 406 aa11.1□□□□□ -0.63
PDPN-210ENST00000513143 FAM214BQ7L5A3 538 aa11.1□□□□□ -0.63
PDPN-210ENST00000513143 NUFIP2Q7Z417 695 aaKnown RBP11.1□□□□□ -0.63
PDPN-210ENST00000513143 JAZF1Q86VZ6 243 aa11.1□□□□□ -0.63
PDPN-210ENST00000513143 ENTHD1Q8IYW4 607 aa11.1□□□□□ -0.63
PDPN-210ENST00000513143 GCNT2Q8N0V5 402 aa11.1□□□□□ -0.63
PDPN-210ENST00000513143 MARVELD2Q8N4S9 558 aa11.1□□□□□ -0.63
PDPN-210ENST00000513143 TCEANCQ8N8B7 351 aa11.1□□□□□ -0.63
PDPN-210ENST00000513143 SLC37A3Q8NCC5 494 aa11.1□□□□□ -0.63
PDPN-210ENST00000513143 SETD9Q8NE22 299 aa11.1□□□□□ -0.63
PDPN-210ENST00000513143 SDR9C7Q8NEX9 313 aa11.1□□□□□ -0.63
PDPN-210ENST00000513143 OR8J1Q8NGP2 316 aa11.1□□□□□ -0.63
PDPN-210ENST00000513143 UBE2FQ969M7 185 aa11.1□□□□□ -0.63
PDPN-210ENST00000513143 ZNF566Q969W8 418 aa11.1□□□□□ -0.63
PDPN-210ENST00000513143 PLEKHA8Q96JA3 519 aa11.1□□□□□ -0.63
PDPN-210ENST00000513143 LRR1Q96L50 414 aa11.1□□□□□ -0.63
PDPN-210ENST00000513143 DMRTA2Q96SC8 542 aa11.1□□□□□ -0.63
PDPN-210ENST00000513143 NMNAT3Q96T66 252 aa11.1□□□□□ -0.63
PDPN-210ENST00000513143 ALG12Q9BV10 488 aa11.1□□□□□ -0.63
PDPN-210ENST00000513143 FN3KQ9H479 309 aa11.1□□□□□ -0.63
PDPN-210ENST00000513143 IMPAD1Q9NX62 359 aa11.1□□□□□ -0.63
PDPN-210ENST00000513143 ZNF226Q9NYT6 803 aa11.1□□□□□ -0.63
PDPN-210ENST00000513143 VSX1Q9NZR4 365 aaPredicted RBP11.1□□□□□ -0.63
PDPN-210ENST00000513143 SH3BGRL2Q9UJC5 107 aa11.1□□□□□ -0.63
PDPN-210ENST00000513143 RNF6Q9Y252 685 aa11.1□□□□□ -0.63
PDPN-210ENST00000513143 HSPE1-MOB4S4R3N1 261 aa11.1□□□□□ -0.63
PDPN-210ENST00000513143 SMG1Q96Q15 3661 aaKnown RBP11.1□□□□□ -0.63
PDPN-210ENST00000513143 FAM208BQ5VWN6 2430 aa11.1□□□□□ -0.63
PDPN-210ENST00000513143 SLC22A23A1A5C7 686 aa11.09□□□□□ -0.63
PDPN-210ENST00000513143 OR6C68A6NDL8 312 aa11.09□□□□□ -0.63
PDPN-210ENST00000513143 M0R129 80 aa11.09□□□□□ -0.63
PDPN-210ENST00000513143 DENRO43583 198 aaKnown RBP11.09□□□□□ -0.63
PDPN-210ENST00000513143 TLX2O43763 284 aaPredicted RBP11.09□□□□□ -0.63
PDPN-210ENST00000513143 MPZL2O60487 215 aa11.09□□□□□ -0.63
PDPN-210ENST00000513143 SLC43A1O75387 559 aa11.09□□□□□ -0.63
PDPN-210ENST00000513143 TNFSF13O75888 250 aa11.09□□□□□ -0.63
PDPN-210ENST00000513143 TMIGD3P0DMS9 266 aaPredicted RBP11.09□□□□□ -0.63
PDPN-210ENST00000513143 GABRB1P18505 474 aa11.09□□□□□ -0.63
PDPN-210ENST00000513143 MYF6P23409 242 aa11.09□□□□□ -0.63
PDPN-210ENST00000513143 ISL1P61371 349 aa11.09□□□□□ -0.63
PDPN-210ENST00000513143 PMPCAQ10713 525 aa11.09□□□□□ -0.63
PDPN-210ENST00000513143 FOXF2Q12947 444 aa11.09□□□□□ -0.63
PDPN-210ENST00000513143 CRMP1Q14194 572 aa11.09□□□□□ -0.63
PDPN-210ENST00000513143 SLC25A30Q5SVS4 291 aa11.09□□□□□ -0.63
PDPN-210ENST00000513143 TMEM211Q6ICI0 200 aa11.09□□□□□ -0.63
PDPN-210ENST00000513143 LEG1Q6P5S2 330 aa11.09□□□□□ -0.63
PDPN-210ENST00000513143 C20orf196Q8IYI0 205 aa11.09□□□□□ -0.63
PDPN-210ENST00000513143 C8orf59Q8N0T1 100 aaPredicted RBP11.09□□□□□ -0.63
PDPN-210ENST00000513143 FAM26EQ8N5C1 309 aa11.09□□□□□ -0.63
PDPN-210ENST00000513143 CYB561A3Q8NBI2 242 aa11.09□□□□□ -0.63
PDPN-210ENST00000513143 NAXEQ8NCW5 288 aa11.09□□□□□ -0.63
PDPN-210ENST00000513143 NOXO1Q8NFA2 376 aa11.09□□□□□ -0.63
PDPN-210ENST00000513143 OR6K3Q8NGY3 331 aa11.09□□□□□ -0.63
PDPN-210ENST00000513143 RHOXF1Q8NHV9 184 aa11.09□□□□□ -0.63
PDPN-210ENST00000513143 TMEM163Q8TC26 289 aa11.09□□□□□ -0.63
PDPN-210ENST00000513143 FNDC8Q8TC99 324 aa11.09□□□□□ -0.63
PDPN-210ENST00000513143 PTP4A1Q93096 173 aa11.09□□□□□ -0.63
PDPN-210ENST00000513143 TMEM54Q969K7 222 aa11.09□□□□□ -0.63
PDPN-210ENST00000513143 NMD3Q96D46 503 aaKnown RBP11.09□□□□□ -0.63
PDPN-210ENST00000513143 IL4I1Q96RQ9 567 aa11.09□□□□□ -0.63
PDPN-210ENST00000513143 Q9H521 79 aa11.09□□□□□ -0.63
PDPN-210ENST00000513143 HINT3Q9NQE9 182 aaKnown RBP11.09□□□□□ -0.63
PDPN-210ENST00000513143 FOXD3Q9UJU5 478 aaPredicted RBP11.09□□□□□ -0.63
PDPN-210ENST00000513143 GPR52Q9Y2T5 361 aa11.09□□□□□ -0.63
PDPN-210ENST00000513143 MEMO1Q9Y316 297 aa11.09□□□□□ -0.63
PDPN-210ENST00000513143 EMC9Q9Y3B6 208 aa11.09□□□□□ -0.63
PDPN-210ENST00000513143 PCNX1Q96RV3 2341 aa11.09□□□□□ -0.63
PDPN-210ENST00000513143 OR6C65A6NJZ3 312 aa11.09□□□□□ -0.63
PDPN-210ENST00000513143 PRR23D1E9PI22 279 aaPredicted RBP11.09□□□□□ -0.63
PDPN-210ENST00000513143 H7C1C5 153 aa11.09□□□□□ -0.63
PDPN-210ENST00000513143 RENP00797 406 aa11.09□□□□□ -0.63
PDPN-210ENST00000513143 PRR23D2P0DMB1 279 aaPredicted RBP11.09□□□□□ -0.63
PDPN-210ENST00000513143 PAICSP22234 425 aaKnown RBP11.09□□□□□ -0.63
PDPN-210ENST00000513143 EDNRAP25101 427 aa11.09□□□□□ -0.63
PDPN-210ENST00000513143 CTSSP25774 331 aa11.09□□□□□ -0.63
PDPN-210ENST00000513143 OR3A2P47893 321 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms