RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 ATP6V1G2O95670 118 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 GPANK1O95872 356 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 WNT11O96014 354 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 DCNP07585 359 aaKnown RBP5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 DUX4L2P0CJ85 424 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 DUX4L3P0CJ86 424 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 DUX4L4P0CJ87 422 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 DUX4L5P0CJ88 424 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 DUX4L6P0CJ89 424 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 DUX4L7P0CJ90 424 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 GZMHP20718 246 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 CHRNA5P30532 468 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 CEACAM7Q14002 265 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 SLC1A5Q15758 541 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 DUX4L9Q6RFH8 374 aaPredicted RBP5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 C4orf22Q6V702 233 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 C9orf139Q6ZV77 190 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 CTU1Q7Z7A3 348 aaKnown RBP5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 MARCH9Q86YJ5 346 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 TRAPPC5Q8IUR0 188 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 TMEM139Q8IV31 216 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 APRG1Q8IVJ8 170 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 EID3Q8N140 333 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 C12orf29Q8N999 325 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 Q8N9G6 341 aaPredicted RBP5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 TERB1Q8NA31 727 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 OR2D3Q8NGH3 330 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 SFXN5Q8TD22 340 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 PCED1BQ96HM7 432 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 JSRP1Q96MG2 331 aaPredicted RBP5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 MRIQ9BWK5 157 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 UGT2B28Q9BY64 529 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 NMUR2Q9GZQ4 415 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 ELOVL4Q9GZR5 314 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 CSTL1Q9H114 145 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 SYT4Q9H2B2 425 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 TMBIM4Q9HC24 238 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 ARMC1Q9NVT9 282 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 BABAM2Q9NXR7 383 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 GHRLQ9UBU3 117 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 DUX4Q9UBX2 424 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 MLXQ9UH92 298 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 LSM7Q9UK45 103 aaKnown RBP5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 PEX16Q9Y5Y5 336 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 STYXL1Q9Y6J8 313 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 KIAA1551Q9HCM1 1747 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 KIR2DL5BA0A0G2JN68 375 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 KIR2DL5BA0A0G2JPC4 375 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 FAM90A26D6RGX4 464 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 H3BTX0 84 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 CXCR6O00574 342 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 PRMT5O14744 637 aaPredicted RBP5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 CHEK1O14757 476 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 BIRC5O15392 142 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 UGT1A9O60656 530 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 NQO1P15559 274 aaKnown RBP5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 HOXB4P17483 251 aaPredicted RBP5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 GRPRP30550 384 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 CLDN20P56880 219 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 PAX2Q02962 417 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 GPR17Q13304 367 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 INPP5JQ15735 1006 aaPredicted RBP5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 GGNBP1Q5YKI7 109 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 DRAM2Q6UX65 266 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 LINGO4Q6UY18 593 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 DPY19L2P2Q6ZN68 376 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 TMEM144Q7Z5S9 345 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 MOB3BQ86TA1 216 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 KIR2DL5AQ8N109 375 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 PAQR4Q8N4S7 273 aaPredicted RBP5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 ARL14EPQ8N8R7 260 aaPredicted RBP5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 KIR2DL5BQ8NHK3 375 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 ZNF398Q8TD17 642 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 DYNLL2Q96FJ2 89 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 S1PR3Q99500 378 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 ZNF717Q9BY31 904 aaPredicted RBP5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 RNF26Q9BY78 433 aaPredicted RBP5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 AKTIPQ9H8T0 292 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 UGT1A8Q9HAW9 530 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 GDF3Q9NR23 364 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 PAK1IP1Q9NWT1 392 aaPredicted RBP5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 GPR160Q9UJ42 338 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 FZR1Q9UM11 496 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 TFR2Q9UP52 801 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 PSG11Q9UQ72 335 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 FKBP7Q9Y680 259 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 NRCAMQ92823 1304 aa5.52□□□□□ -1.53
TRAPPC11-209ENST00000512476 SLX4Q8IY92 1834 aa5.52□□□□□ -1.53
TRAPPC11-209ENST00000512476 LILRA5A6NI73 299 aa5.52□□□□□ -1.53
TRAPPC11-209ENST00000512476 SRRM3A6NNA2 597 aaPredicted RBP5.52□□□□□ -1.53
TRAPPC11-209ENST00000512476 RRHO14718 337 aa5.52□□□□□ -1.53
TRAPPC11-209ENST00000512476 UBDO15205 165 aa5.52□□□□□ -1.53
TRAPPC11-209ENST00000512476 MPZL2O60487 215 aa5.52□□□□□ -1.53
TRAPPC11-209ENST00000512476 ATP5LO75964 103 aa5.52□□□□□ -1.53
TRAPPC11-209ENST00000512476 FGF19O95750 216 aa5.52□□□□□ -1.53
TRAPPC11-209ENST00000512476 OCM2P0CE71 109 aa5.52□□□□□ -1.53
TRAPPC11-209ENST00000512476 KCNE1P15382 129 aa5.52□□□□□ -1.53
TRAPPC11-209ENST00000512476 GCAP28676 217 aa5.52□□□□□ -1.53
TRAPPC11-209ENST00000512476 PMELP40967 661 aa5.52□□□□□ -1.53
TRAPPC11-209ENST00000512476 MNDAP41218 407 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms