RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 GKAP1Q5VSY0 366 aaPredicted RBP12.67□□□□□ -0.38
CCHCR1-229ENST00000512418 PIWIL3Q7Z3Z3 882 aaKnown RBP12.67□□□□□ -0.38
CCHCR1-229ENST00000512418 SLC30A8Q8IWU4 369 aa12.67□□□□□ -0.38
CCHCR1-229ENST00000512418 DPP10Q8N608 796 aa12.67□□□□□ -0.38
CCHCR1-229ENST00000512418 GPR32P1Q8NGA4 272 aa12.67□□□□□ -0.38
CCHCR1-229ENST00000512418 OR6X1Q8NH79 312 aa12.67□□□□□ -0.38
CCHCR1-229ENST00000512418 SNX18Q96RF0 628 aa12.67□□□□□ -0.38
CCHCR1-229ENST00000512418 CGREF1Q99674 301 aa12.67□□□□□ -0.38
CCHCR1-229ENST00000512418 TPK1Q9H3S4 243 aa12.67□□□□□ -0.38
CCHCR1-229ENST00000512418 MS4A5Q9H3V2 200 aa12.67□□□□□ -0.38
CCHCR1-229ENST00000512418 CPSF4LA6NMK7 179 aaKnown RBP12.66□□□□□ -0.38
CCHCR1-229ENST00000512418 ANGPT2O15123 496 aa12.66□□□□□ -0.38
CCHCR1-229ENST00000512418 ENTPD5O75356 428 aa12.66□□□□□ -0.38
CCHCR1-229ENST00000512418 IL2RGP31785 369 aa12.66□□□□□ -0.38
CCHCR1-229ENST00000512418 NPTX1Q15818 432 aa12.66□□□□□ -0.38
CCHCR1-229ENST00000512418 FXNQ16595 210 aa12.66□□□□□ -0.38
CCHCR1-229ENST00000512418 MSMPQ1L6U9 139 aa12.66□□□□□ -0.38
CCHCR1-229ENST00000512418 TTMPQ5BVD1 217 aa12.66□□□□□ -0.38
CCHCR1-229ENST00000512418 TTC33Q6PID6 262 aaPredicted RBP12.66□□□□□ -0.38
CCHCR1-229ENST00000512418 UGT2A3Q6UWM9 527 aa12.66□□□□□ -0.38
CCHCR1-229ENST00000512418 WDR88Q6ZMY6 472 aa12.66□□□□□ -0.38
CCHCR1-229ENST00000512418 SLC35D2Q76EJ3 337 aa12.66□□□□□ -0.38
CCHCR1-229ENST00000512418 PATL1Q86TB9 770 aaKnown RBP12.66□□□□□ -0.38
CCHCR1-229ENST00000512418 RETREG3Q86VR2 466 aa12.66□□□□□ -0.38
CCHCR1-229ENST00000512418 LINC01356Q8N9X3 169 aa12.66□□□□□ -0.38
CCHCR1-229ENST00000512418 ADAMTS16Q8TE57 1224 aa12.66□□□□□ -0.38
CCHCR1-229ENST00000512418 C19orf24Q9BVV8 132 aa12.66□□□□□ -0.38
CCHCR1-229ENST00000512418 SLC19A3Q9BZV2 496 aa12.66□□□□□ -0.38
CCHCR1-229ENST00000512418 ZNF385DQ9H6B1 395 aa12.66□□□□□ -0.38
CCHCR1-229ENST00000512418 KAT8Q9H7Z6 458 aaKnown RBP12.66□□□□□ -0.38
CCHCR1-229ENST00000512418 NANSQ9NR45 359 aa12.66□□□□□ -0.38
CCHCR1-229ENST00000512418 GLTPQ9NZD2 209 aa12.66□□□□□ -0.38
CCHCR1-229ENST00000512418 REV1Q9UBZ9 1251 aa12.66□□□□□ -0.38
CCHCR1-229ENST00000512418 SLC7A8Q9UHI5 535 aa12.66□□□□□ -0.38
CCHCR1-229ENST00000512418 TRIM33Q9UPN9 1127 aa12.66□□□□□ -0.38
CCHCR1-229ENST00000512418 TRAPPC13A5PLN9 417 aa12.65□□□□□ -0.38
CCHCR1-229ENST00000512418 RNF13O43567 381 aa12.65□□□□□ -0.38
CCHCR1-229ENST00000512418 CH25HO95992 272 aa12.65□□□□□ -0.38
CCHCR1-229ENST00000512418 THY1P04216 161 aa12.65□□□□□ -0.38
CCHCR1-229ENST00000512418 SERPINA5P05154 406 aa12.65□□□□□ -0.38
CCHCR1-229ENST00000512418 VIMP08670 466 aaKnown RBP12.65□□□□□ -0.38
CCHCR1-229ENST00000512418 LSP1P33241 339 aa12.65□□□□□ -0.38
CCHCR1-229ENST00000512418 PCGF2P35227 344 aa12.65□□□□□ -0.38
CCHCR1-229ENST00000512418 CDH15P55291 814 aa12.65□□□□□ -0.38
CCHCR1-229ENST00000512418 ZP4Q12836 540 aa12.65□□□□□ -0.38
CCHCR1-229ENST00000512418 SELPLGQ14242 412 aa12.65□□□□□ -0.38
CCHCR1-229ENST00000512418 RAB39AQ14964 217 aa12.65□□□□□ -0.38
CCHCR1-229ENST00000512418 INTS11Q5TA45 600 aaKnown RBP12.65□□□□□ -0.38
CCHCR1-229ENST00000512418 REP15Q6BDI9 236 aa12.65□□□□□ -0.38
CCHCR1-229ENST00000512418 ZNF584Q8IVC4 421 aa12.65□□□□□ -0.38
CCHCR1-229ENST00000512418 SLC22A24Q8N4F4 322 aa12.65□□□□□ -0.38
CCHCR1-229ENST00000512418 VANGL1Q8TAA9 524 aaPredicted RBP12.65□□□□□ -0.38
CCHCR1-229ENST00000512418 TSPEARQ8WU66 669 aa12.65□□□□□ -0.38
CCHCR1-229ENST00000512418 TMEM54Q969K7 222 aa12.65□□□□□ -0.38
CCHCR1-229ENST00000512418 ZNF566Q969W8 418 aa12.65□□□□□ -0.38
CCHCR1-229ENST00000512418 SLC25A44Q96H78 314 aaPredicted RBP12.65□□□□□ -0.38
CCHCR1-229ENST00000512418 MPP4Q96JB8 637 aa12.65□□□□□ -0.38
CCHCR1-229ENST00000512418 SYT3Q9BQG1 590 aa12.65□□□□□ -0.38
CCHCR1-229ENST00000512418 ZNF426Q9BUY5 554 aa12.65□□□□□ -0.38
CCHCR1-229ENST00000512418 PCDHAC1Q9H158 963 aa12.65□□□□□ -0.38
CCHCR1-229ENST00000512418 INTS9Q9NV88 658 aaKnown RBP12.65□□□□□ -0.38
CCHCR1-229ENST00000512418 TAS2R5Q9NYW4 299 aa12.65□□□□□ -0.38
CCHCR1-229ENST00000512418 ZNF229Q9UJW7 825 aa12.65□□□□□ -0.38
CCHCR1-229ENST00000512418 SLC7A7Q9UM01 511 aa12.65□□□□□ -0.38
CCHCR1-229ENST00000512418 LYNX1G3V0Z9 82 aa12.64□□□□□ -0.39
CCHCR1-229ENST00000512418 KPNA4O00629 521 aaPredicted RBP12.64□□□□□ -0.39
CCHCR1-229ENST00000512418 LYPD3O95274 346 aa12.64□□□□□ -0.39
CCHCR1-229ENST00000512418 FARS2O95363 451 aaKnown RBP12.64□□□□□ -0.39
CCHCR1-229ENST00000512418 OR8G3PP0DMU2 310 aa12.64□□□□□ -0.39
CCHCR1-229ENST00000512418 LYNX1P0DP58 116 aa12.64□□□□□ -0.39
CCHCR1-229ENST00000512418 NFYCQ13952 458 aa12.64□□□□□ -0.39
CCHCR1-229ENST00000512418 TRIP10Q15642 601 aa12.64□□□□□ -0.39
CCHCR1-229ENST00000512418 ELFN2Q5R3F8 820 aa12.64□□□□□ -0.39
CCHCR1-229ENST00000512418 RBM45Q8IUH3 476 aaKnown RBP12.64□□□□□ -0.39
CCHCR1-229ENST00000512418 SKA3Q8IX90 412 aa12.64□□□□□ -0.39
CCHCR1-229ENST00000512418 OR4D11Q8NGI4 311 aa12.64□□□□□ -0.39
CCHCR1-229ENST00000512418 SLC26A7Q8TE54 656 aa12.64□□□□□ -0.39
CCHCR1-229ENST00000512418 RASSF5Q8WWW0 418 aa12.64□□□□□ -0.39
CCHCR1-229ENST00000512418 TAMM41Q96BW9 452 aa12.64□□□□□ -0.39
CCHCR1-229ENST00000512418 C1orf159Q96HA4 380 aa12.64□□□□□ -0.39
CCHCR1-229ENST00000512418 TMEFF2Q9UIK5 374 aaPredicted RBP12.64□□□□□ -0.39
CCHCR1-229ENST00000512418 DHHO43323 396 aa12.63□□□□□ -0.39
CCHCR1-229ENST00000512418 HIST1H2ABP04908 130 aa12.63□□□□□ -0.39
CCHCR1-229ENST00000512418 ASAH2BP0C7U1 165 aa12.63□□□□□ -0.39
CCHCR1-229ENST00000512418 PATE4P0C8F1 98 aa12.63□□□□□ -0.39
CCHCR1-229ENST00000512418 PGA4P0DJD7 388 aa12.63□□□□□ -0.39
CCHCR1-229ENST00000512418 PGA3P0DJD8 388 aa12.63□□□□□ -0.39
CCHCR1-229ENST00000512418 UMPSP11172 480 aa12.63□□□□□ -0.39
CCHCR1-229ENST00000512418 TCN1P20061 433 aaPredicted RBP12.63□□□□□ -0.39
CCHCR1-229ENST00000512418 CD247P20963 164 aa12.63□□□□□ -0.39
CCHCR1-229ENST00000512418 PCMT1P22061 227 aa12.63□□□□□ -0.39
CCHCR1-229ENST00000512418 ACHEP22303 614 aa12.63□□□□□ -0.39
CCHCR1-229ENST00000512418 ALDH3B1P43353 468 aa12.63□□□□□ -0.39
CCHCR1-229ENST00000512418 DVL1P1P54792 670 aaPredicted RBP12.63□□□□□ -0.39
CCHCR1-229ENST00000512418 SRSF2Q01130 221 aaKnown RBP12.63□□□□□ -0.39
CCHCR1-229ENST00000512418 CCNIQ14094 377 aa12.63□□□□□ -0.39
CCHCR1-229ENST00000512418 MELKQ14680 651 aa12.63□□□□□ -0.39
CCHCR1-229ENST00000512418 LIPNQ5VXI9 398 aa12.63□□□□□ -0.39
CCHCR1-229ENST00000512418 LRFN4Q6PJG9 635 aa12.63□□□□□ -0.39
CCHCR1-229ENST00000512418 HIST3H2AQ7L7L0 130 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms