RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 TUBA1AQ71U36 451 aa13.61□□□□□ -0.23
SCLT1-209ENST00000511426 SHFQ7M4L6 423 aa13.61□□□□□ -0.23
SCLT1-209ENST00000511426 GALNTL5Q7Z4T8 443 aa13.61□□□□□ -0.23
SCLT1-209ENST00000511426 YRDCQ86U90 279 aaKnown RBP13.61□□□□□ -0.23
SCLT1-209ENST00000511426 ATCAYQ86WG3 371 aa13.61□□□□□ -0.23
SCLT1-209ENST00000511426 PHC2Q8IXK0 858 aa13.61□□□□□ -0.23
SCLT1-209ENST00000511426 TIGD4Q8IY51 512 aa13.61□□□□□ -0.23
SCLT1-209ENST00000511426 OR6V1Q8N148 313 aa13.61□□□□□ -0.23
SCLT1-209ENST00000511426 FAM109AQ8N4B1 249 aa13.61□□□□□ -0.23
SCLT1-209ENST00000511426 FDCSPQ8NFU4 85 aa13.61□□□□□ -0.23
SCLT1-209ENST00000511426 CPNE4Q96A23 557 aaPredicted RBP13.61□□□□□ -0.23
SCLT1-209ENST00000511426 SMAD5Q99717 465 aaKnown RBP13.61□□□□□ -0.23
SCLT1-209ENST00000511426 NAA50Q9GZZ1 169 aaKnown RBP13.61□□□□□ -0.23
SCLT1-209ENST00000511426 SIAEQ9HAT2 523 aa13.61□□□□□ -0.23
SCLT1-209ENST00000511426 BABAM2Q9NXR7 383 aa13.61□□□□□ -0.23
SCLT1-209ENST00000511426 PLA2G3Q9NZ20 509 aa13.61□□□□□ -0.23
SCLT1-209ENST00000511426 KLK13Q9UKR3 277 aa13.61□□□□□ -0.23
SCLT1-209ENST00000511426 B9D1Q9UPM9 204 aa13.61□□□□□ -0.23
SCLT1-209ENST00000511426 MSRB2Q9Y3D2 182 aa13.61□□□□□ -0.23
SCLT1-209ENST00000511426 KCNMB2Q9Y691 235 aa13.61□□□□□ -0.23
SCLT1-209ENST00000511426 FAM186AA6NE01 2351 aa13.61□□□□□ -0.23
SCLT1-209ENST00000511426 DOCK10Q96BY6 2186 aa13.61□□□□□ -0.23
SCLT1-209ENST00000511426 TRAV17A0A0B4J275 112 aa13.6□□□□□ -0.23
SCLT1-209ENST00000511426 A6NL46 340 aa13.6□□□□□ -0.23
SCLT1-209ENST00000511426 ZNF670-ZNF695F2Z2N8 137 aa13.6□□□□□ -0.23
SCLT1-209ENST00000511426 TRAF3IP2O43734 574 aaPredicted RBP13.6□□□□□ -0.23
SCLT1-209ENST00000511426 IGHG1P01857 330 aa13.6□□□□□ -0.23
SCLT1-209ENST00000511426 TCEA1P23193 301 aaKnown RBP13.6□□□□□ -0.23
SCLT1-209ENST00000511426 GABRA5P31644 462 aa13.6□□□□□ -0.23
SCLT1-209ENST00000511426 UGT2B10P36537 528 aa13.6□□□□□ -0.23
SCLT1-209ENST00000511426 MEOX1P50221 254 aa13.6□□□□□ -0.23
SCLT1-209ENST00000511426 CCL11P51671 97 aa13.6□□□□□ -0.23
SCLT1-209ENST00000511426 TRAM1Q15629 374 aa13.6□□□□□ -0.23
SCLT1-209ENST00000511426 THEM4Q5T1C6 240 aa13.6□□□□□ -0.23
SCLT1-209ENST00000511426 OR2G6Q5TZ20 316 aa13.6□□□□□ -0.23
SCLT1-209ENST00000511426 GGNQ86UU5 652 aa13.6□□□□□ -0.23
SCLT1-209ENST00000511426 PM20D2Q8IYS1 436 aa13.6□□□□□ -0.23
SCLT1-209ENST00000511426 OR2V1Q8NHB1 315 aa13.6□□□□□ -0.23
SCLT1-209ENST00000511426 DNAJA3Q96EY1 480 aa13.6□□□□□ -0.23
SCLT1-209ENST00000511426 SLC25A44Q96H78 314 aaPredicted RBP13.6□□□□□ -0.23
SCLT1-209ENST00000511426 ADGRG7Q96K78 797 aa13.6□□□□□ -0.23
SCLT1-209ENST00000511426 MRPL13Q9BYD1 178 aaKnown RBP13.6□□□□□ -0.23
SCLT1-209ENST00000511426 NUAK2Q9H093 628 aa13.6□□□□□ -0.23
SCLT1-209ENST00000511426 WASF3Q9UPY6 502 aa13.6□□□□□ -0.23
SCLT1-209ENST00000511426 RIF1Q5UIP0 2472 aaKnown RBP13.6□□□□□ -0.23
SCLT1-209ENST00000511426 IGLV1-36A0A0B4J1U3 117 aa13.59□□□□□ -0.23
SCLT1-209ENST00000511426 A0A0J9YW62 118 aa13.59□□□□□ -0.23
SCLT1-209ENST00000511426 A0A1W2PQL4 384 aaPredicted RBP13.59□□□□□ -0.23
SCLT1-209ENST00000511426 ATE1O95260 518 aa13.59□□□□□ -0.23
SCLT1-209ENST00000511426 ACTL6AO96019 429 aa13.59□□□□□ -0.23
SCLT1-209ENST00000511426 F10P00742 488 aa13.59□□□□□ -0.23
SCLT1-209ENST00000511426 TFP02787 698 aa13.59□□□□□ -0.23
SCLT1-209ENST00000511426 HRGP04196 525 aa13.59□□□□□ -0.23
SCLT1-209ENST00000511426 HLA-DOBP13765 273 aa13.59□□□□□ -0.23
SCLT1-209ENST00000511426 ZNF85Q03923 595 aa13.59□□□□□ -0.23
SCLT1-209ENST00000511426 C19orf57Q0VDD7 668 aa13.59□□□□□ -0.23
SCLT1-209ENST00000511426 SRSF6Q13247 344 aaKnown RBP13.59□□□□□ -0.23
SCLT1-209ENST00000511426 SSX1Q16384 188 aa13.59□□□□□ -0.23
SCLT1-209ENST00000511426 CDONQ4KMG0 1287 aa13.59□□□□□ -0.23
SCLT1-209ENST00000511426 WIPI1Q5MNZ9 446 aaPredicted RBP13.59□□□□□ -0.23
SCLT1-209ENST00000511426 B3GLCTQ6Y288 498 aa13.59□□□□□ -0.23
SCLT1-209ENST00000511426 LINC00299Q6ZSB3 139 aa13.59□□□□□ -0.23
SCLT1-209ENST00000511426 LSRQ86X29 649 aaPredicted RBP13.59□□□□□ -0.23
SCLT1-209ENST00000511426 TMEM251Q8N6I4 163 aa13.59□□□□□ -0.23
SCLT1-209ENST00000511426 KBTBD8Q8NFY9 601 aa13.59□□□□□ -0.23
SCLT1-209ENST00000511426 SPRYD4Q8WW59 207 aaPredicted RBP13.59□□□□□ -0.23
SCLT1-209ENST00000511426 PNPLA2Q96AD5 504 aa13.59□□□□□ -0.23
SCLT1-209ENST00000511426 RBP7Q96R05 134 aa13.59□□□□□ -0.23
SCLT1-209ENST00000511426 INTS14Q96SY0 518 aa13.59□□□□□ -0.23
SCLT1-209ENST00000511426 WDR76Q9H967 626 aa13.59□□□□□ -0.23
SCLT1-209ENST00000511426 SRA1Q9HD15 236 aaKnown RBP13.59□□□□□ -0.23
SCLT1-209ENST00000511426 STUB1Q9UNE7 303 aa13.59□□□□□ -0.23
SCLT1-209ENST00000511426 PCDHGA9Q9Y5G4 932 aaKnown RBP13.59□□□□□ -0.23
SCLT1-209ENST00000511426 ZFHX2Q9C0A1 2572 aaPredicted RBP13.59□□□□□ -0.23
SCLT1-209ENST00000511426 KLK10O43240 276 aa13.59□□□□□ -0.23
SCLT1-209ENST00000511426 CD1AP06126 327 aa13.59□□□□□ -0.23
SCLT1-209ENST00000511426 MRPL3P09001 348 aaKnown RBP13.59□□□□□ -0.23
SCLT1-209ENST00000511426 GAAP10253 952 aa13.59□□□□□ -0.23
SCLT1-209ENST00000511426 ENPP1P22413 925 aa13.59□□□□□ -0.23
SCLT1-209ENST00000511426 CARD18P57730 90 aa13.59□□□□□ -0.23
SCLT1-209ENST00000511426 EGR3Q06889 387 aa13.59□□□□□ -0.23
SCLT1-209ENST00000511426 MELKQ14680 651 aa13.59□□□□□ -0.23
SCLT1-209ENST00000511426 DEFB109BQ30KR1 87 aa13.59□□□□□ -0.23
SCLT1-209ENST00000511426 CCDC58Q4VC31 144 aa13.59□□□□□ -0.23
SCLT1-209ENST00000511426 TEX30Q5JUR7 227 aa13.59□□□□□ -0.23
SCLT1-209ENST00000511426 HBMQ6B0K9 141 aa13.59□□□□□ -0.23
SCLT1-209ENST00000511426 IGFL3Q6UXB1 125 aa13.59□□□□□ -0.23
SCLT1-209ENST00000511426 PLEKHG7Q6ZR37 379 aa13.59□□□□□ -0.23
SCLT1-209ENST00000511426 USP43Q70EL4 1123 aa13.59□□□□□ -0.23
SCLT1-209ENST00000511426 ZNF454Q8N9F8 522 aa13.59□□□□□ -0.23
SCLT1-209ENST00000511426 NOXO1Q8NFA2 376 aa13.59□□□□□ -0.23
SCLT1-209ENST00000511426 GATAD2BQ8WXI9 593 aa13.59□□□□□ -0.23
SCLT1-209ENST00000511426 INTS12Q96CB8 462 aaKnown RBP13.59□□□□□ -0.23
SCLT1-209ENST00000511426 SCNM1Q9BWG6 230 aa13.59□□□□□ -0.23
SCLT1-209ENST00000511426 KLHL9Q9P2J3 617 aa13.59□□□□□ -0.23
SCLT1-209ENST00000511426 ZNF726A6NNF4 738 aa13.58□□□□□ -0.24
SCLT1-209ENST00000511426 DCTN6O00399 190 aa13.58□□□□□ -0.24
SCLT1-209ENST00000511426 TNFSF11O14788 317 aa13.58□□□□□ -0.24
SCLT1-209ENST00000511426 EFSO43281 561 aa13.58□□□□□ -0.24
SCLT1-209ENST00000511426 SLC16A7O60669 478 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms