RNA–Protein interactions for RNA: ENST00000511081.5

CLDND1-223, Transcript of claudin domain containing 1, human

TSL 2 BASIC

Gene CLDND1, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-223	ENST00000511081	ATR	Q13535	2644 aa		10.52	□□□□□ -0.73
CLDND1-223	ENST00000511081	FBN1	P35555	2871 aa	Known RBP	10.51	□□□□□ -0.73
CLDND1-223	ENST00000511081	MXRA5	Q9NR99	2828 aa		10.51	□□□□□ -0.73
CLDND1-223	ENST00000511081	IGHV4-30-2	A0A087WSY4	118 aa		10.51	□□□□□ -0.73
CLDND1-223	ENST00000511081	IGHV2OR16-5	A0A0B4J2B6	119 aa		10.51	□□□□□ -0.73
CLDND1-223	ENST00000511081	NPIPB13	A6NJU9	1138 aa		10.51	□□□□□ -0.73
CLDND1-223	ENST00000511081	CENPBD1	B2RD01	187 aa		10.51	□□□□□ -0.73
CLDND1-223	ENST00000511081	NPIPB4	C9JG80	1138 aa		10.51	□□□□□ -0.73
CLDND1-223	ENST00000511081	C11orf98	E9PRG8	122 aa		10.51	□□□□□ -0.73
CLDND1-223	ENST00000511081	HIST1H2AB	P04908	130 aa		10.51	□□□□□ -0.73
CLDND1-223	ENST00000511081	CELA3B	P08861	270 aa		10.51	□□□□□ -0.73
CLDND1-223	ENST00000511081	PGA4	P0DJD7	388 aa		10.51	□□□□□ -0.73
CLDND1-223	ENST00000511081	PGA3	P0DJD8	388 aa		10.51	□□□□□ -0.73
CLDND1-223	ENST00000511081	ZNF35	P13682	527 aa		10.51	□□□□□ -0.73
CLDND1-223	ENST00000511081	ZNF14	P17017	642 aa	Predicted RBP	10.51	□□□□□ -0.73
CLDND1-223	ENST00000511081	FUT1	P19526	365 aa		10.51	□□□□□ -0.73
CLDND1-223	ENST00000511081	OR1E2	P47887	323 aa		10.51	□□□□□ -0.73
CLDND1-223	ENST00000511081	CSNK1A1	P48729	337 aa		10.51	□□□□□ -0.73
CLDND1-223	ENST00000511081	UGT2B15	P54855	530 aa		10.51	□□□□□ -0.73
CLDND1-223	ENST00000511081	ZNF813	Q6ZN06	617 aa		10.51	□□□□□ -0.73
CLDND1-223	ENST00000511081	HIST3H2A	Q7L7L0	130 aa		10.51	□□□□□ -0.73
CLDND1-223	ENST00000511081	TREML1	Q86YW5	311 aa		10.51	□□□□□ -0.73
CLDND1-223	ENST00000511081	TMEM239	Q8WW34	195 aa		10.51	□□□□□ -0.73
CLDND1-223	ENST00000511081	HIST1H2AC	Q93077	130 aa		10.51	□□□□□ -0.73
CLDND1-223	ENST00000511081	FBXO17	Q96EF6	278 aa		10.51	□□□□□ -0.73
CLDND1-223	ENST00000511081	DOK1	Q99704	481 aa		10.51	□□□□□ -0.73
CLDND1-223	ENST00000511081	FOXB1	Q99853	325 aa		10.51	□□□□□ -0.73
CLDND1-223	ENST00000511081	KCNS3	Q9BQ31	491 aa		10.51	□□□□□ -0.73
CLDND1-223	ENST00000511081	ULBP2	Q9BZM5	246 aa		10.51	□□□□□ -0.73
CLDND1-223	ENST00000511081	MYLK2	Q9H1R3	596 aa		10.51	□□□□□ -0.73
CLDND1-223	ENST00000511081	EFCAB1	Q9HAE3	211 aa		10.51	□□□□□ -0.73
CLDND1-223	ENST00000511081	NOX3	Q9HBY0	568 aa		10.51	□□□□□ -0.73
CLDND1-223	ENST00000511081	FBXO9	Q9UK97	447 aa	Predicted RBP	10.51	□□□□□ -0.73
CLDND1-223	ENST00000511081	CHD3	Q12873	2000 aa	Known RBP	10.5	□□□□□ -0.73
CLDND1-223	ENST00000511081	NME4	O00746	187 aa		10.5	□□□□□ -0.73
CLDND1-223	ENST00000511081	RNF13	O43567	381 aa		10.5	□□□□□ -0.73
CLDND1-223	ENST00000511081	MGRN1	O60291	552 aa		10.5	□□□□□ -0.73
CLDND1-223	ENST00000511081	OR7A10	O76100	309 aa		10.5	□□□□□ -0.73
CLDND1-223	ENST00000511081	HLA-H	P01893	362 aa		10.5	□□□□□ -0.73
CLDND1-223	ENST00000511081	OR4A8	P0C604	315 aa		10.5	□□□□□ -0.73
CLDND1-223	ENST00000511081	THBS4	P35443	961 aa		10.5	□□□□□ -0.73
CLDND1-223	ENST00000511081	IDH3G	P51553	393 aa	Predicted RBP	10.5	□□□□□ -0.73
CLDND1-223	ENST00000511081	NUDT6	P53370	316 aa		10.5	□□□□□ -0.73
CLDND1-223	ENST00000511081	TAS2R41	P59536	307 aa		10.5	□□□□□ -0.73
CLDND1-223	ENST00000511081	RAB1A	P62820	205 aa		10.5	□□□□□ -0.73
CLDND1-223	ENST00000511081	LIPE	Q05469	1076 aa		10.5	□□□□□ -0.73
CLDND1-223	ENST00000511081	LOXL1	Q08397	574 aa	Predicted RBP	10.5	□□□□□ -0.73
CLDND1-223	ENST00000511081	ST3GAL3	Q11203	375 aa		10.5	□□□□□ -0.73
CLDND1-223	ENST00000511081	NRN1L	Q496H8	165 aa		10.5	□□□□□ -0.73
CLDND1-223	ENST00000511081	CLEC2A	Q6UVW9	174 aa		10.5	□□□□□ -0.73
CLDND1-223	ENST00000511081	SKA3	Q8IX90	412 aa		10.5	□□□□□ -0.73
CLDND1-223	ENST00000511081	MAPK1IP1L	Q8NDC0	245 aa		10.5	□□□□□ -0.73
CLDND1-223	ENST00000511081	C10orf105	Q8TEF2	133 aa		10.5	□□□□□ -0.73
CLDND1-223	ENST00000511081	TMEM255B	Q8WV15	326 aa		10.5	□□□□□ -0.73
CLDND1-223	ENST00000511081	NANOS1	Q8WY41	292 aa	Known RBP	10.5	□□□□□ -0.73
CLDND1-223	ENST00000511081	ZNF566	Q969W8	418 aa		10.5	□□□□□ -0.73
CLDND1-223	ENST00000511081	C20orf141	Q9NUB4	165 aa		10.5	□□□□□ -0.73
CLDND1-223	ENST00000511081	GMPR2	Q9P2T1	348 aa	Known RBP	10.5	□□□□□ -0.73
CLDND1-223	ENST00000511081	CUBN	O60494	3623 aa		10.49	□□□□□ -0.73
CLDND1-223	ENST00000511081	COL6A5	A8TX70	2615 aa		10.49	□□□□□ -0.73
CLDND1-223	ENST00000511081	VSTM5	A8MXK1	200 aa		10.49	□□□□□ -0.73
CLDND1-223	ENST00000511081	VWC2L	B2RUY7	222 aa		10.49	□□□□□ -0.73
CLDND1-223	ENST00000511081	INAFM1	C9JVW0	142 aa		10.49	□□□□□ -0.73
CLDND1-223	ENST00000511081	BLOC1S5-TXNDC5	H3BN57	136 aa		10.49	□□□□□ -0.73
CLDND1-223	ENST00000511081	KPNA4	O00629	521 aa	Predicted RBP	10.49	□□□□□ -0.73
CLDND1-223	ENST00000511081	FFAR1	O14842	300 aa		10.49	□□□□□ -0.73
CLDND1-223	ENST00000511081	DHH	O43323	396 aa		10.49	□□□□□ -0.73
CLDND1-223	ENST00000511081	TLX2	O43763	284 aa	Predicted RBP	10.49	□□□□□ -0.73
CLDND1-223	ENST00000511081	CD5L	O43866	347 aa		10.49	□□□□□ -0.73
CLDND1-223	ENST00000511081	SHOX2	O60902	331 aa	Predicted RBP	10.49	□□□□□ -0.73
CLDND1-223	ENST00000511081	SEC14L2	O76054	403 aa		10.49	□□□□□ -0.73
CLDND1-223	ENST00000511081	PRSS23	O95084	383 aa		10.49	□□□□□ -0.73
CLDND1-223	ENST00000511081	BCL10	O95999	233 aa		10.49	□□□□□ -0.73
CLDND1-223	ENST00000511081	IGFBP1	P08833	259 aa	Predicted RBP	10.49	□□□□□ -0.73
CLDND1-223	ENST00000511081	CSF3	P09919	207 aa		10.49	□□□□□ -0.73
CLDND1-223	ENST00000511081	SLC25A16	P16260	332 aa		10.49	□□□□□ -0.73
CLDND1-223	ENST00000511081	FUT4	P22083	530 aa		10.49	□□□□□ -0.73
CLDND1-223	ENST00000511081	NR4A1	P22736	598 aa		10.49	□□□□□ -0.73
CLDND1-223	ENST00000511081	EVX1	P49640	407 aa		10.49	□□□□□ -0.73
CLDND1-223	ENST00000511081	RUNX1T1	Q06455	604 aa		10.49	□□□□□ -0.73
CLDND1-223	ENST00000511081	RPL18	Q07020	188 aa	Known RBP	10.49	□□□□□ -0.73
CLDND1-223	ENST00000511081	GSG1	Q2KHT4	349 aa		10.49	□□□□□ -0.73
CLDND1-223	ENST00000511081	LRRC23	Q53EV4	343 aa	Predicted RBP	10.49	□□□□□ -0.73
CLDND1-223	ENST00000511081	ARMC4	Q5T2S8	1044 aa		10.49	□□□□□ -0.73
CLDND1-223	ENST00000511081	DEF8	Q6ZN54	512 aa		10.49	□□□□□ -0.73
CLDND1-223	ENST00000511081	CBLL1	Q75N03	491 aa		10.49	□□□□□ -0.73
CLDND1-223	ENST00000511081	NANOGNB	Q7Z5D8	188 aa		10.49	□□□□□ -0.73
CLDND1-223	ENST00000511081	SLC22A24	Q8N4F4	322 aa		10.49	□□□□□ -0.73
CLDND1-223	ENST00000511081	ZNF525	Q8N782	197 aa		10.49	□□□□□ -0.73
CLDND1-223	ENST00000511081	PFN4	Q8NHR9	129 aa		10.49	□□□□□ -0.73
CLDND1-223	ENST00000511081	FGFBP3	Q8TAT2	258 aa		10.49	□□□□□ -0.73
CLDND1-223	ENST00000511081	HTRA1	Q92743	480 aa		10.49	□□□□□ -0.73
CLDND1-223	ENST00000511081	NMD3	Q96D46	503 aa	Known RBP	10.49	□□□□□ -0.73
CLDND1-223	ENST00000511081	SGTB	Q96EQ0	304 aa		10.49	□□□□□ -0.73
CLDND1-223	ENST00000511081	PRRC1	Q96M27	445 aa		10.49	□□□□□ -0.73
CLDND1-223	ENST00000511081	SORCS2	Q96PQ0	1159 aa		10.49	□□□□□ -0.73
CLDND1-223	ENST00000511081	TNFRSF13C	Q96RJ3	184 aa		10.49	□□□□□ -0.73
CLDND1-223	ENST00000511081	MAN2C1	Q9NTJ4	1040 aa		10.49	□□□□□ -0.73
CLDND1-223	ENST00000511081	TMEM38B	Q9NVV0	291 aa		10.49	□□□□□ -0.73
CLDND1-223	ENST00000511081	ABCD2	Q9UBJ2	740 aa		10.49	□□□□□ -0.73

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