RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 AMBNQ9NP70 447 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 ALKBH4Q9NXW9 302 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 RCC2Q9P258 522 aaKnown RBP3.32□□□□□ -1.88
USP53-205ENST00000509769 TESQ9UGI8 421 aaKnown RBP3.32□□□□□ -1.88
USP53-205ENST00000509769 AMDHD2Q9Y303 409 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 HMX2A2RU54 273 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 OTOL1A6NHN0 477 aaPredicted RBP3.32□□□□□ -1.88
USP53-205ENST00000509769 NPIPB9F8W1W9 429 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 AQP7O14520 342 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 GPR182O15218 404 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 CHST1O43916 411 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 ENTPD3O75355 529 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 TRAPPC6AO75865 159 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 SYNGR4O95473 234 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 NFATC1O95644 943 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 C6orf47O95873 294 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 MT-CO1P00395 513 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 ACAA1P09110 424 aaPredicted RBP3.32□□□□□ -1.88
USP53-205ENST00000509769 ATXN8OSP0DMR3 200 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 TBXA2RP21731 343 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 ALAS2P22557 587 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 EPHA8P29322 1005 aaPredicted RBP3.32□□□□□ -1.88
USP53-205ENST00000509769 IL12BP29460 328 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 GDNFP39905 211 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 THPOP40225 353 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 GABRA4P48169 554 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 CDC34P49427 236 aaPredicted RBP3.32□□□□□ -1.88
USP53-205ENST00000509769 UBE2G1P62253 170 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 RPS25P62851 125 aaKnown RBP3.32□□□□□ -1.88
USP53-205ENST00000509769 CXADRP78310 365 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 EMX1Q04741 257 aaPredicted RBP3.32□□□□□ -1.88
USP53-205ENST00000509769 SCARF1Q14162 830 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 SOWAHCQ53LP3 525 aaPredicted RBP3.32□□□□□ -1.88
USP53-205ENST00000509769 CTSL3PQ5NE16 218 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 S100A7L2Q5SY68 101 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 AADACL3Q5VUY0 350 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 FSTL4Q6MZW2 842 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 CLEC18BQ6UXF7 455 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 APOOLQ6UXV4 268 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 ZNF534Q76KX8 674 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 IRF2BP2Q7Z5L9 587 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 GALNT10Q86SR1 603 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 NIT1Q86X76 327 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 C20orf196Q8IYI0 205 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 OR5AS1Q8N127 324 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 OR2L13Q8N349 312 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 ARRDC4Q8NCT1 418 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 OR5D14Q8NGL3 314 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 CREB3L4Q8TEY5 395 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 RGP1Q92546 391 aaPredicted RBP3.32□□□□□ -1.88
USP53-205ENST00000509769 IGSF8Q969P0 613 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 SLC35B4Q969S0 331 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 C2orf50Q96LR7 162 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 ZNF583Q96ND8 569 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 NIPSNAP1Q9BPW8 284 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 C11orf54Q9H0W9 315 aaPredicted RBP3.32□□□□□ -1.88
USP53-205ENST00000509769 GOLGA2P5Q9HBQ8 144 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 HES4Q9HCC6 221 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 TMPRSS4Q9NRS4 437 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 PLEKHJ1Q9NW61 149 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 ASIC5Q9NY37 505 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 CTSFQ9UBX1 484 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 OSGIN2Q9Y236 505 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 PCDHA9Q9Y5H5 950 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 RCCD1A6NED2 376 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 ARRDC5A6NEK1 342 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 MFSD2BA6NFX1 497 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 OR2T8A6NH00 312 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 OR5K4A6NMS3 321 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 UBE2Q2LH0YL09 131 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 GPR171O14626 319 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 FOXD2O60548 495 aaPredicted RBP3.32□□□□□ -1.88
USP53-205ENST00000509769 CSO75390 466 aaKnown RBP3.32□□□□□ -1.88
USP53-205ENST00000509769 OR2J2O76002 312 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 SIX3O95343 332 aaPredicted RBP3.32□□□□□ -1.88
USP53-205ENST00000509769 SLC25A5P05141 298 aaKnown RBP3.32□□□□□ -1.88
USP53-205ENST00000509769 TFPIP10646 304 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 PNMTP11086 282 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 CSF2RBP32927 897 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 CDKN2BP42772 138 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 AVPR1BP47901 424 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 CDX1P47902 265 aaPredicted RBP3.32□□□□□ -1.88
USP53-205ENST00000509769 METAP1P53582 386 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 SEMG2Q02383 582 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 ACY1Q03154 408 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 GAB1Q13480 694 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 PRTGQ2VWP7 1150 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 ITPRIPL2Q3MIP1 535 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 TIGD5Q53EQ6 642 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 PLEKHS1Q5SXH7 462 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 NANOGP8Q6NSW7 305 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 TMEM81Q6P7N7 255 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 ZNF66Q6ZN08 573 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 DGAT2L6Q6ZPD8 337 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 SPATA31D4Q6ZUB0 917 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 DTWD1Q8N5C7 304 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 GATSQ8NAP1 163 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 IL31RAQ8NI17 732 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 PPTC7Q8NI37 304 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 C2CD4CQ8TF44 421 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms