RNA–Protein interactions for RNA: ENST00000509748.1

LIN54-208, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 5

Gene LIN54, Length 729 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-208ENST00000509748 KIAA1324LA8MWY0 1029 aaPredicted RBP18.35■□□□□ 0.53
LIN54-208ENST00000509748 RNF13O43567 381 aa18.35■□□□□ 0.53
LIN54-208ENST00000509748 IGF2P01344 180 aa18.35■□□□□ 0.53
LIN54-208ENST00000509748 TSPAN19P0C672 248 aa18.35■□□□□ 0.53
LIN54-208ENST00000509748 SLC25A16P16260 332 aa18.35■□□□□ 0.53
LIN54-208ENST00000509748 RBM34P42696 430 aaKnown RBP18.35■□□□□ 0.53
LIN54-208ENST00000509748 TAS2R41P59536 307 aa18.35■□□□□ 0.53
LIN54-208ENST00000509748 SNRPD2P62316 118 aaKnown RBP18.35■□□□□ 0.53
LIN54-208ENST00000509748 PIGFQ07326 219 aa18.35■□□□□ 0.53
LIN54-208ENST00000509748 MELKQ14680 651 aa18.35■□□□□ 0.53
LIN54-208ENST00000509748 GSG1Q2KHT4 349 aa18.35■□□□□ 0.53
LIN54-208ENST00000509748 SLC15A3Q8IY34 581 aa18.35■□□□□ 0.53
LIN54-208ENST00000509748 MICU2Q8IYU8 434 aa18.35■□□□□ 0.53
LIN54-208ENST00000509748 OR2T12Q8NG77 320 aa18.35■□□□□ 0.53
LIN54-208ENST00000509748 RP9Q8TA86 221 aaKnown RBP18.35■□□□□ 0.53
LIN54-208ENST00000509748 FGFBP3Q8TAT2 258 aa18.35■□□□□ 0.53
LIN54-208ENST00000509748 SLC25A44Q96H78 314 aaPredicted RBP18.35■□□□□ 0.53
LIN54-208ENST00000509748 TNFRSF13CQ96RJ3 184 aa18.35■□□□□ 0.53
LIN54-208ENST00000509748 DOK1Q99704 481 aa18.35■□□□□ 0.53
LIN54-208ENST00000509748 C20orf141Q9NUB4 165 aa18.35■□□□□ 0.53
LIN54-208ENST00000509748 DNHD1Q96M86 4753 aa18.35■□□□□ 0.53
LIN54-208ENST00000509748 VWC2LB2RUY7 222 aa18.34■□□□□ 0.53
LIN54-208ENST00000509748 TLX2O43763 284 aaPredicted RBP18.34■□□□□ 0.53
LIN54-208ENST00000509748 OR7A10O76100 309 aa18.34■□□□□ 0.53
LIN54-208ENST00000509748 IFNA14P01570 189 aa18.34■□□□□ 0.53
LIN54-208ENST00000509748 HIST1H2ABP04908 130 aa18.34■□□□□ 0.53
LIN54-208ENST00000509748 IGFBP1P08833 259 aaPredicted RBP18.34■□□□□ 0.53
LIN54-208ENST00000509748 PGA4P0DJD7 388 aa18.34■□□□□ 0.53
LIN54-208ENST00000509748 PGA3P0DJD8 388 aa18.34■□□□□ 0.53
LIN54-208ENST00000509748 CD79AP11912 226 aa18.34■□□□□ 0.53
LIN54-208ENST00000509748 ZNF35P13682 527 aa18.34■□□□□ 0.53
LIN54-208ENST00000509748 FUT1P19526 365 aa18.34■□□□□ 0.53
LIN54-208ENST00000509748 FUT4P22083 530 aa18.34■□□□□ 0.53
LIN54-208ENST00000509748 RUNX1T1Q06455 604 aa18.34■□□□□ 0.53
LIN54-208ENST00000509748 RPL18Q07020 188 aaKnown RBP18.34■□□□□ 0.53
LIN54-208ENST00000509748 MSMPQ1L6U9 139 aa18.34■□□□□ 0.53
LIN54-208ENST00000509748 TMEM249Q2WGJ8 235 aa18.34■□□□□ 0.53
LIN54-208ENST00000509748 HIST3H2AQ7L7L0 130 aa18.34■□□□□ 0.53
LIN54-208ENST00000509748 SKA3Q8IX90 412 aa18.34■□□□□ 0.53
LIN54-208ENST00000509748 ANKS4BQ8N8V4 417 aa18.34■□□□□ 0.53
LIN54-208ENST00000509748 LIPHQ8WWY8 451 aa18.34■□□□□ 0.53
LIN54-208ENST00000509748 HIST1H2ACQ93077 130 aa18.34■□□□□ 0.53
LIN54-208ENST00000509748 MED4Q9NPJ6 270 aa18.34■□□□□ 0.53
LIN54-208ENST00000509748 ELOVL7A1L3X0 281 aa18.33■□□□□ 0.52
LIN54-208ENST00000509748 BLOC1S5-TXNDC5H3BN57 136 aa18.33■□□□□ 0.52
LIN54-208ENST00000509748 TP53P04637 393 aaPredicted RBP18.33■□□□□ 0.52
LIN54-208ENST00000509748 CSF3P09919 207 aa18.33■□□□□ 0.52
LIN54-208ENST00000509748 THRBP10828 461 aa18.33■□□□□ 0.52
LIN54-208ENST00000509748 UMPSP11172 480 aa18.33■□□□□ 0.52
LIN54-208ENST00000509748 COX4I1P13073 169 aa18.33■□□□□ 0.52
LIN54-208ENST00000509748 NPR2P20594 1047 aa18.33■□□□□ 0.52
LIN54-208ENST00000509748 NR4A1P22736 598 aa18.33■□□□□ 0.52
LIN54-208ENST00000509748 SELENOWP63302 87 aa18.33■□□□□ 0.52
LIN54-208ENST00000509748 HIST3H3Q16695 136 aa18.33■□□□□ 0.52
LIN54-208ENST00000509748 LRRC23Q53EV4 343 aaPredicted RBP18.33■□□□□ 0.52
LIN54-208ENST00000509748 C8orf82Q6P1X6 216 aaPredicted RBP18.33■□□□□ 0.52
LIN54-208ENST00000509748 PIWIL3Q7Z3Z3 882 aaKnown RBP18.33■□□□□ 0.52
LIN54-208ENST00000509748 NANOGNBQ7Z5D8 188 aa18.33■□□□□ 0.52
LIN54-208ENST00000509748 TREML1Q86YW5 311 aa18.33■□□□□ 0.52
LIN54-208ENST00000509748 TMEM239Q8WW34 195 aa18.33■□□□□ 0.52
LIN54-208ENST00000509748 ZNF566Q969W8 418 aa18.33■□□□□ 0.52
LIN54-208ENST00000509748 SGTBQ96EQ0 304 aa18.33■□□□□ 0.52
LIN54-208ENST00000509748 SEPHS2Q99611 448 aa18.33■□□□□ 0.52
LIN54-208ENST00000509748 MRPL13Q9BYD1 178 aaKnown RBP18.33■□□□□ 0.52
LIN54-208ENST00000509748 DENND2DQ9H6A0 471 aaPredicted RBP18.33■□□□□ 0.52
LIN54-208ENST00000509748 A4GNTQ9UNA3 340 aa18.33■□□□□ 0.52
LIN54-208ENST00000509748 MALRD1Q5VYJ5 2156 aa18.32■□□□□ 0.52
LIN54-208ENST00000509748 DHHO43323 396 aa18.32■□□□□ 0.52
LIN54-208ENST00000509748 BCL10O95999 233 aa18.32■□□□□ 0.52
LIN54-208ENST00000509748 F13BP05160 661 aa18.32■□□□□ 0.52
LIN54-208ENST00000509748 PATE4P0C8F1 98 aa18.32■□□□□ 0.52
LIN54-208ENST00000509748 GIPRP48546 466 aa18.32■□□□□ 0.52
LIN54-208ENST00000509748 PPOXP50336 477 aa18.32■□□□□ 0.52
LIN54-208ENST00000509748 RAB1AP62820 205 aa18.32■□□□□ 0.52
LIN54-208ENST00000509748 LSM11P83369 360 aaKnown RBP eCLIP18.32■□□□□ 0.52
LIN54-208ENST00000509748 VLDLRP98155 873 aa18.32■□□□□ 0.52
LIN54-208ENST00000509748 DAG1Q14118 895 aa18.32■□□□□ 0.52
LIN54-208ENST00000509748 HSP90B2PQ58FF3 399 aa18.32■□□□□ 0.52
LIN54-208ENST00000509748 ZNF584Q8IVC4 421 aa18.32■□□□□ 0.52
LIN54-208ENST00000509748 VRK1Q99986 396 aaPredicted RBP18.32■□□□□ 0.52
LIN54-208ENST00000509748 YAE1D1Q9NRH1 226 aa18.32■□□□□ 0.52
LIN54-208ENST00000509748 TMEM38BQ9NVV0 291 aa18.32■□□□□ 0.52
LIN54-208ENST00000509748 COL6A5A8TX70 2615 aa18.32■□□□□ 0.52
LIN54-208ENST00000509748 hCG_2039718K7EN88 272 aa18.31■□□□□ 0.52
LIN54-208ENST00000509748 QDPRP09417 244 aa18.31■□□□□ 0.52
LIN54-208ENST00000509748 AQP2P41181 271 aa18.31■□□□□ 0.52
LIN54-208ENST00000509748 PTDSS1P48651 473 aaKnown RBP18.31■□□□□ 0.52
LIN54-208ENST00000509748 LIPEQ05469 1076 aa18.31■□□□□ 0.52
LIN54-208ENST00000509748 SNTB2Q13425 540 aaKnown RBP18.31■□□□□ 0.52
LIN54-208ENST00000509748 KRT80Q6KB66 452 aa18.31■□□□□ 0.52
LIN54-208ENST00000509748 SVOPLQ8N434 492 aa18.31■□□□□ 0.52
LIN54-208ENST00000509748 SLC22A24Q8N4F4 322 aa18.31■□□□□ 0.52
LIN54-208ENST00000509748 MOSPD2Q8NHP6 518 aa18.31■□□□□ 0.52
LIN54-208ENST00000509748 ASB10Q8WXI3 467 aa18.31■□□□□ 0.52
LIN54-208ENST00000509748 TPD52L3Q96J77 140 aa18.31■□□□□ 0.52
LIN54-208ENST00000509748 AP3M1Q9Y2T2 418 aa18.31■□□□□ 0.52
LIN54-208ENST00000509748 SNX13Q9Y5W8 968 aa18.31■□□□□ 0.52
LIN54-208ENST00000509748 FKBP7Q9Y680 259 aa18.31■□□□□ 0.52
LIN54-208ENST00000509748 FBN1P35555 2871 aaKnown RBP18.31■□□□□ 0.52
LIN54-208ENST00000509748 NME4O00746 187 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms