RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 EMC3Q9P0I2 261 aa6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 MAGEL2Q9UJ55 1249 aa6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 SLC13A4Q9UKG4 626 aa6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 RCE1Q9Y256 329 aa6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 B3GALT5Q9Y2C3 310 aa6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 PLEKHA6Q9Y2H5 1048 aa6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 AP3M1Q9Y2T2 418 aa6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 GPR52Q9Y2T5 361 aa6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 UGT2A1Q9Y4X1 527 aa6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 F8P00451 2351 aa6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 MAP1AP78559 2803 aaPredicted RBP6.3□□□□□ -1.4
TOPBP1-207ENST00000509162 SHISA9B4DS77 424 aa6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 MCIDASD6RGH6 385 aa6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 MRPL33O75394 65 aaKnown RBP6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 SERPINI2O75830 405 aa6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 IGF2P01344 180 aa6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 F13BP05160 661 aa6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 SCG5P05408 212 aa6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 PGA4P0DJD7 388 aa6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 PGA3P0DJD8 388 aa6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 IFNGR1P15260 489 aa6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 CD53P19397 219 aa6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 FLNAP21333 2647 aaKnown RBP6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 FKBP2P26885 142 aaKnown RBP6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 ERFP50548 548 aa6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 ROR2Q01974 943 aaKnown RBP6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 FMODQ06828 376 aa6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 PUDPQ08623 228 aa6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 ZP4Q12836 540 aa6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 PPP1R8Q12972 351 aaKnown RBP6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 BNIP1Q12981 228 aa6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 STK11Q15831 433 aa6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 MSMPQ1L6U9 139 aa6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 TBRG1Q3YBR2 411 aa6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 NCMAPQ5T1S8 102 aa6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 ARMC4Q5T2S8 1044 aa6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 CARD17Q5XLA6 110 aa6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 ZNF770Q6IQ21 691 aaPredicted RBP6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 PODNL1Q6PEZ8 512 aa6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 TTC33Q6PID6 262 aaPredicted RBP6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 C5orf46Q6UWT4 87 aa6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 C16orf89Q6UX73 402 aa6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 MBOAT2Q6ZWT7 520 aa6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 H1FNTQ75WM6 255 aaPredicted RBP6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 KIF18BQ86Y91 864 aa6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 C20orf196Q8IYI0 205 aa6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 ADGRG5Q8IZF4 528 aa6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 NOXO1Q8NFA2 376 aa6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 OR52N5Q8NH56 324 aa6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 ZNF519Q8TB69 540 aa6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 RASSF5Q8WWW0 418 aa6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 HDAC2Q92769 488 aaKnown RBP6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 BCL2L2Q92843 193 aaPredicted RBP6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 TMEM54Q969K7 222 aa6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 SLCO4A1Q96BD0 722 aa6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 SGTBQ96EQ0 304 aa6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 C1orf159Q96HA4 380 aa6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 BOD1Q96IK1 185 aa6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 FAM46AQ96IP4 442 aaKnown RBP6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 ZNF75AQ96N20 296 aa6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 MUS81Q96NY9 551 aa6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 TSPAN32Q96QS1 320 aa6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 NAA11Q9BSU3 229 aaPredicted RBP6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 CADM1Q9BY67 442 aaKnown RBP6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 POLDIP3Q9BY77 421 aaKnown RBP6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 LINC00470Q9BZP3 86 aa6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 SLC19A3Q9BZV2 496 aa6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 OR10A4Q9H209 315 aa6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 NMNAT1Q9HAN9 279 aaPredicted RBP6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 GPR35Q9HC97 309 aa6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 SLC17A5Q9NRA2 495 aa6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 CCM2LQ9NUG4 571 aaPredicted RBP6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 TAS2R16Q9NYV7 291 aa6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 ZNF229Q9UJW7 825 aa6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 PRDM4Q9UKN5 801 aa6.29□□□□□ -1.4
TOPBP1-207ENST00000509162 IGHV1-18A0A0C4DH31 117 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 A0A1W2PRQ8 180 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 SH3PXD2BA1X283 911 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 RPL36A-HNRNPH2H7BZ11 118 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 H7C1C5 153 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 GPR171O14626 319 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 GSTA4O15217 222 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 CLOCKO15516 846 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 OR2T1O43869 369 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 VAMP5O95183 116 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 SLC2A10O95528 541 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 CNOT4O95628 575 aaKnown RBP6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 MT-ATP6P00846 226 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 IGHMP01871 453 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 IGFBP1P08833 259 aaPredicted RBP6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 THRBP10828 461 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 PSKH1P11801 424 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 IFI30P13284 250 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 IL32P24001 234 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 MPGP29372 298 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 CALCRP30988 508 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 ZNF133P52736 654 aaPredicted RBP6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 IST1P53990 364 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 BIDP55957 195 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 LCN6P62502 163 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms