RNA–Protein interactions for RNA: ENST00000509109.5

CCSER1-208, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 1,070 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-208ENST00000509109 DNAJA4Q8WW22 397 aaPredicted RBP6.48□□□□□ -1.37
CCSER1-208ENST00000509109 C7orf26Q96N11 449 aa6.48□□□□□ -1.37
CCSER1-208ENST00000509109 ALKBH3Q96Q83 286 aaPredicted RBP6.48□□□□□ -1.37
CCSER1-208ENST00000509109 KATNB1Q9BVA0 655 aa6.48□□□□□ -1.37
CCSER1-208ENST00000509109 C12orf10Q9HB07 376 aa6.48□□□□□ -1.37
CCSER1-208ENST00000509109 BCL2L10Q9HD36 194 aa6.48□□□□□ -1.37
CCSER1-208ENST00000509109 MYOZ1Q9NP98 299 aaPredicted RBP6.48□□□□□ -1.37
CCSER1-208ENST00000509109 TCF7L2Q9NQB0 619 aa6.48□□□□□ -1.37
CCSER1-208ENST00000509109 USH1CQ9Y6N9 552 aa6.48□□□□□ -1.37
CCSER1-208ENST00000509109 ANK2Q01484 3957 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 IGHV4-30-2A0A087WSY4 118 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 ARPC4-TTLL3A0A0A6YYG9 625 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 PRORSD1PA6NEY8 169 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 VSTM5A8MXK1 200 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 EVPLLA8MZ36 301 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 ATP6V1G2-DDX39BF2Z307 99 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 NDUFS8O00217 210 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 CLIC1O00299 241 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 AIM2O14862 343 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 NPIPB7O75200 414 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 SLC43A1O75387 559 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 C1QCP02747 245 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 MRPL19P49406 292 aaKnown RBP6.47□□□□□ -1.37
CCSER1-208ENST00000509109 VLDLRP98155 873 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 LOXL1Q08397 574 aaPredicted RBP6.47□□□□□ -1.37
CCSER1-208ENST00000509109 FOXE3Q13461 319 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 RIN1Q13671 783 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 C1DQ13901 141 aaKnown RBP6.47□□□□□ -1.37
CCSER1-208ENST00000509109 RGNQ15493 299 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 MAPK11Q15759 364 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 TMEM249Q2WGJ8 235 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 TBRG1Q3YBR2 411 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 HIKESHIQ53FT3 197 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 C6orf52Q5T4I8 152 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 FAM69AQ5T7M9 428 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 FAM91A1Q658Y4 838 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 REEP3Q6NUK4 255 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 NIPAL3Q6P499 406 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 ANKRD16Q6P6B7 361 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 B3GLCTQ6Y288 498 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 NET1Q7Z628 596 aaPredicted RBP6.47□□□□□ -1.37
CCSER1-208ENST00000509109 SNX32Q86XE0 403 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 HIPK1Q86Z02 1210 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 GPR137CQ8N3F9 429 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 ZNF525Q8N782 197 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 WDR31Q8NA23 367 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 PIK3C3Q8NEB9 887 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 OR10H5Q8NGA6 315 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 OR5AN1Q8NGI8 311 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 OR9I1Q8NGQ6 314 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 OR1K1Q8NGR3 316 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 SPATA3Q8NHX4 192 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 MAGEE2Q8TD90 523 aaPredicted RBP6.47□□□□□ -1.37
CCSER1-208ENST00000509109 DYDC1Q8WWB3 177 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 GTF2H4Q92759 462 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 PROX1Q92786 737 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 SLC38A4Q969I6 547 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 VPS33AQ96AX1 596 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 C3orf49Q96BT1 292 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 TLCD1Q96CP7 247 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 AURKBQ96GD4 344 aaPredicted RBP6.47□□□□□ -1.37
CCSER1-208ENST00000509109 ZNF385AQ96PM9 386 aaKnown RBP6.47□□□□□ -1.37
CCSER1-208ENST00000509109 SORCS2Q96PQ0 1159 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 SLC38A2Q96QD8 506 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 OR52B2Q96RD2 323 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 TNFRSF13CQ96RJ3 184 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 ZNF607Q96SK3 696 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 EPYCQ99645 322 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 C1QTNF6Q9BXI9 259 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 LINC00470Q9BZP3 86 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 RABEP2Q9H5N1 569 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 EVA1AQ9H8M9 152 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 YAE1D1Q9NRH1 226 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 SLC6A13Q9NSD5 602 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 LPAR3Q9UBY5 353 aa6.47□□□□□ -1.37
CCSER1-208ENST00000509109 TESQ9UGI8 421 aaKnown RBP6.47□□□□□ -1.37
CCSER1-208ENST00000509109 ANK3Q12955 4377 aaKnown RBP6.47□□□□□ -1.37
CCSER1-208ENST00000509109 TRAV36DV7A0A075B6V5 113 aa6.46□□□□□ -1.38
CCSER1-208ENST00000509109 NR5A2O00482 541 aa6.46□□□□□ -1.38
CCSER1-208ENST00000509109 NDUFS7O75251 213 aa6.46□□□□□ -1.38
CCSER1-208ENST00000509109 ENTPD5O75356 428 aa6.46□□□□□ -1.38
CCSER1-208ENST00000509109 SERPINB7O75635 380 aa6.46□□□□□ -1.38
CCSER1-208ENST00000509109 LGI1O95970 557 aa6.46□□□□□ -1.38
CCSER1-208ENST00000509109 PRG2P13727 222 aa6.46□□□□□ -1.38
CCSER1-208ENST00000509109 NQO1P15559 274 aaKnown RBP6.46□□□□□ -1.38
CCSER1-208ENST00000509109 PTNP21246 168 aa6.46□□□□□ -1.38
CCSER1-208ENST00000509109 SLC6A2P23975 617 aa6.46□□□□□ -1.38
CCSER1-208ENST00000509109 SERPINF1P36955 418 aa6.46□□□□□ -1.38
CCSER1-208ENST00000509109 RPS5P46782 204 aaKnown RBP6.46□□□□□ -1.38
CCSER1-208ENST00000509109 FOXG1P55316 489 aaPredicted RBP6.46□□□□□ -1.38
CCSER1-208ENST00000509109 RGS8P57771 180 aaPredicted RBP6.46□□□□□ -1.38
CCSER1-208ENST00000509109 SLC25A3Q00325 362 aa6.46□□□□□ -1.38
CCSER1-208ENST00000509109 IL1RL1Q01638 556 aa6.46□□□□□ -1.38
CCSER1-208ENST00000509109 ROR2Q01974 943 aaKnown RBP6.46□□□□□ -1.38
CCSER1-208ENST00000509109 BNIP2Q12982 314 aa6.46□□□□□ -1.38
CCSER1-208ENST00000509109 GTDC1Q4AE62 458 aa6.46□□□□□ -1.38
CCSER1-208ENST00000509109 ALG10BQ5I7T1 473 aa6.46□□□□□ -1.38
CCSER1-208ENST00000509109 LRIF1Q5T3J3 769 aa6.46□□□□□ -1.38
CCSER1-208ENST00000509109 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.46□□□□□ -1.38
CCSER1-208ENST00000509109 ULK3Q6PHR2 472 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms