RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 MEPEQ9NQ76 525 aaPredicted RBP16.22■□□□□ 0.19
UBE3D-207ENST00000509102 SPEF1Q9Y4P9 236 aa16.22■□□□□ 0.19
UBE3D-207ENST00000509102 B9A039 149 aa16.21■□□□□ 0.19
UBE3D-207ENST00000509102 CXCR6O00574 342 aa16.21■□□□□ 0.19
UBE3D-207ENST00000509102 GMNNO75496 209 aa16.21■□□□□ 0.19
UBE3D-207ENST00000509102 UBL3O95164 117 aa16.21■□□□□ 0.19
UBE3D-207ENST00000509102 FARS2O95363 451 aaKnown RBP16.21■□□□□ 0.19
UBE3D-207ENST00000509102 CSF3P09919 207 aa16.21■□□□□ 0.19
UBE3D-207ENST00000509102 B4GALT1P15291 398 aa16.21■□□□□ 0.19
UBE3D-207ENST00000509102 LSP1P33241 339 aa16.21■□□□□ 0.19
UBE3D-207ENST00000509102 NHLRC1Q6VVB1 395 aa16.21■□□□□ 0.19
UBE3D-207ENST00000509102 FKBP9P1Q75LS8 142 aa16.21■□□□□ 0.19
UBE3D-207ENST00000509102 SLC46A3Q7Z3Q1 461 aa16.21■□□□□ 0.19
UBE3D-207ENST00000509102 PIWIL3Q7Z3Z3 882 aaKnown RBP16.21■□□□□ 0.19
UBE3D-207ENST00000509102 NUP37Q8NFH4 326 aa16.21■□□□□ 0.19
UBE3D-207ENST00000509102 PFN4Q8NHR9 129 aa16.21■□□□□ 0.19
UBE3D-207ENST00000509102 GEMIN6Q8WXD5 167 aaKnown RBP16.21■□□□□ 0.19
UBE3D-207ENST00000509102 KCTD14Q9BQ13 255 aaPredicted RBP16.21■□□□□ 0.19
UBE3D-207ENST00000509102 FNDC11Q9BVV2 318 aa16.21■□□□□ 0.19
UBE3D-207ENST00000509102 HLA-HP01893 362 aa16.2■□□□□ 0.18
UBE3D-207ENST00000509102 ERCC1P07992 297 aaPredicted RBP16.2■□□□□ 0.18
UBE3D-207ENST00000509102 OR4A8P0C604 315 aa16.2■□□□□ 0.18
UBE3D-207ENST00000509102 NR2C1P13056 603 aa16.2■□□□□ 0.18
UBE3D-207ENST00000509102 EFNA4P52798 201 aa16.2■□□□□ 0.18
UBE3D-207ENST00000509102 UGT2B15P54855 530 aa16.2■□□□□ 0.18
UBE3D-207ENST00000509102 RPL18Q07020 188 aaKnown RBP16.2■□□□□ 0.18
UBE3D-207ENST00000509102 MELKQ14680 651 aa16.2■□□□□ 0.18
UBE3D-207ENST00000509102 KRTAP21-3Q3LHN1 58 aa16.2■□□□□ 0.18
UBE3D-207ENST00000509102 IFI44LQ53G44 452 aa16.2■□□□□ 0.18
UBE3D-207ENST00000509102 TMEM54Q969K7 222 aa16.2■□□□□ 0.18
UBE3D-207ENST00000509102 FAM162AQ96A26 154 aa16.2■□□□□ 0.18
UBE3D-207ENST00000509102 INIPQ9NRY2 104 aa16.2■□□□□ 0.18
UBE3D-207ENST00000509102 NSD1Q96L73 2696 aaPredicted RBP16.2■□□□□ 0.18
UBE3D-207ENST00000509102 CENPBD1B2RD01 187 aa16.19■□□□□ 0.18
UBE3D-207ENST00000509102 NME4O00746 187 aa16.19■□□□□ 0.18
UBE3D-207ENST00000509102 CELA3BP08861 270 aa16.19■□□□□ 0.18
UBE3D-207ENST00000509102 OR8G3PP0DMU2 310 aa16.19■□□□□ 0.18
UBE3D-207ENST00000509102 HOXB4P17483 251 aaPredicted RBP16.19■□□□□ 0.18
UBE3D-207ENST00000509102 PRDX6P30041 224 aa16.19■□□□□ 0.18
UBE3D-207ENST00000509102 PTDSS1P48651 473 aaKnown RBP16.19■□□□□ 0.18
UBE3D-207ENST00000509102 ZNF84P51523 738 aa16.19■□□□□ 0.18
UBE3D-207ENST00000509102 SEC24CP53992 1094 aa16.19■□□□□ 0.18
UBE3D-207ENST00000509102 PIGFQ07326 219 aa16.19■□□□□ 0.18
UBE3D-207ENST00000509102 DPPA2Q7Z7J5 298 aa16.19■□□□□ 0.18
UBE3D-207ENST00000509102 CYP4Z1Q86W10 505 aa16.19■□□□□ 0.18
UBE3D-207ENST00000509102 CDK20Q8IZL9 346 aa16.19■□□□□ 0.18
UBE3D-207ENST00000509102 FAM168AQ92567 244 aa16.19■□□□□ 0.18
UBE3D-207ENST00000509102 ZNF442Q9H7R0 627 aa16.19■□□□□ 0.18
UBE3D-207ENST00000509102 SPAG4Q9NPE6 437 aa16.19■□□□□ 0.18
UBE3D-207ENST00000509102 IGHV2OR16-5A0A0B4J2B6 119 aa16.18■□□□□ 0.18
UBE3D-207ENST00000509102 DHHO43323 396 aa16.18■□□□□ 0.18
UBE3D-207ENST00000509102 F12P00748 615 aaPredicted RBP16.18■□□□□ 0.18
UBE3D-207ENST00000509102 SERPINA1P01009 418 aa16.18■□□□□ 0.18
UBE3D-207ENST00000509102 F13BP05160 661 aa16.18■□□□□ 0.18
UBE3D-207ENST00000509102 PGA4P0DJD7 388 aa16.18■□□□□ 0.18
UBE3D-207ENST00000509102 PGA3P0DJD8 388 aa16.18■□□□□ 0.18
UBE3D-207ENST00000509102 SAGP10523 405 aaPredicted RBP16.18■□□□□ 0.18
UBE3D-207ENST00000509102 SLC25A16P16260 332 aa16.18■□□□□ 0.18
UBE3D-207ENST00000509102 NPR2P20594 1047 aa16.18■□□□□ 0.18
UBE3D-207ENST00000509102 CALCRP30988 508 aa16.18■□□□□ 0.18
UBE3D-207ENST00000509102 GSK3BP49841 420 aa16.18■□□□□ 0.18
UBE3D-207ENST00000509102 RAB1AP62820 205 aa16.18■□□□□ 0.18
UBE3D-207ENST00000509102 GALK2Q01415 458 aa16.18■□□□□ 0.18
UBE3D-207ENST00000509102 DAG1Q14118 895 aa16.18■□□□□ 0.18
UBE3D-207ENST00000509102 TRAM2Q15035 370 aa16.18■□□□□ 0.18
UBE3D-207ENST00000509102 EFNB3Q15768 340 aa16.18■□□□□ 0.18
UBE3D-207ENST00000509102 ADIPOQQ15848 244 aa16.18■□□□□ 0.18
UBE3D-207ENST00000509102 SWI5Q1ZZU3 235 aa16.18■□□□□ 0.18
UBE3D-207ENST00000509102 DNM1P46Q6ZS02 220 aa16.18■□□□□ 0.18
UBE3D-207ENST00000509102 RRM2BQ7LG56 351 aa16.18■□□□□ 0.18
UBE3D-207ENST00000509102 TREML1Q86YW5 311 aa16.18■□□□□ 0.18
UBE3D-207ENST00000509102 OFCC1Q8IZS5 231 aa16.18■□□□□ 0.18
UBE3D-207ENST00000509102 SLC22A24Q8N4F4 322 aa16.18■□□□□ 0.18
UBE3D-207ENST00000509102 LIPHQ8WWY8 451 aa16.18■□□□□ 0.18
UBE3D-207ENST00000509102 HTRA1Q92743 480 aa16.18■□□□□ 0.18
UBE3D-207ENST00000509102 BPIFA2Q96DR5 249 aa16.18■□□□□ 0.18
UBE3D-207ENST00000509102 VRK1Q99986 396 aaPredicted RBP16.18■□□□□ 0.18
UBE3D-207ENST00000509102 C20orf141Q9NUB4 165 aa16.18■□□□□ 0.18
UBE3D-207ENST00000509102 B3GNT2Q9NY97 397 aa16.18■□□□□ 0.18
UBE3D-207ENST00000509102 RPS6KA6Q9UK32 745 aa16.18■□□□□ 0.18
UBE3D-207ENST00000509102 HIVEP2P31629 2446 aa16.18■□□□□ 0.18
UBE3D-207ENST00000509102 GMNCA6NCL1 334 aa16.17■□□□□ 0.18
UBE3D-207ENST00000509102 ZNF503-AS2A6NEH8 195 aa16.17■□□□□ 0.18
UBE3D-207ENST00000509102 SNX3O60493 162 aa16.17■□□□□ 0.18
UBE3D-207ENST00000509102 QDPRP09417 244 aa16.17■□□□□ 0.18
UBE3D-207ENST00000509102 IFI30P13284 250 aa16.17■□□□□ 0.18
UBE3D-207ENST00000509102 PCSK6P29122 969 aa16.17■□□□□ 0.18
UBE3D-207ENST00000509102 AQP2P41181 271 aa16.17■□□□□ 0.18
UBE3D-207ENST00000509102 GIPRP48546 466 aa16.17■□□□□ 0.18
UBE3D-207ENST00000509102 PSME3P61289 254 aa16.17■□□□□ 0.18
UBE3D-207ENST00000509102 RPS23P62266 143 aaKnown RBP16.17■□□□□ 0.18
UBE3D-207ENST00000509102 SNTB2Q13425 540 aaKnown RBP16.17■□□□□ 0.18
UBE3D-207ENST00000509102 TAF11Q15544 211 aa16.17■□□□□ 0.18
UBE3D-207ENST00000509102 ALG10Q5BKT4 473 aa16.17■□□□□ 0.18
UBE3D-207ENST00000509102 GKAP1Q5VSY0 366 aaPredicted RBP16.17■□□□□ 0.18
UBE3D-207ENST00000509102 C8orf82Q6P1X6 216 aaPredicted RBP16.17■□□□□ 0.18
UBE3D-207ENST00000509102 TMEM53Q6P2H8 277 aa16.17■□□□□ 0.18
UBE3D-207ENST00000509102 CBLL1Q75N03 491 aa16.17■□□□□ 0.18
UBE3D-207ENST00000509102 VTCN1Q7Z7D3 282 aa16.17■□□□□ 0.18
UBE3D-207ENST00000509102 ZNF525Q8N782 197 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms