RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 MRPS18AQ9NVS2 196 aaKnown RBP3.56□□□□□ -1.84
NEDD4-209ENST00000508871 COPZ2Q9P299 210 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 GLS2Q9UI32 602 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 LAMP3Q9UQV4 416 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 DMRT1Q9Y5R6 373 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 OBSL1O75147 1896 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 hCG_1818297A0A087WSY0 165 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 PRAMEF33A0A0G2JMD5 474 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 TCRBV9S1A1TA0A576 114 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 FAM157AC9JC47 383 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 F6UB75 175 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 SDHDO14521 159 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 SNAI2O43623 268 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 PRAMEF10O60809 474 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 ALOX12BO75342 701 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 MOSPD3O75425 235 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 TSPAN12O95859 305 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 OR8U9P0C7N5 309 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 AKR1C4P17516 323 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 SERPINA2P20848 420 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 ZP3P21754 424 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 CAV2P51636 162 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 RSU1Q15404 277 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 PCK2Q16822 640 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 STEAP1BQ6NZ63 245 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 QSOX2Q6ZRP7 698 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 LANCL3Q6ZV70 420 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 NOXA1Q86UR1 476 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 ZNF595Q8IYB9 648 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 OR4L1Q8NH43 312 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 NKD2Q969F2 451 aaPredicted RBP3.56□□□□□ -1.84
NEDD4-209ENST00000508871 RCN3Q96D15 328 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 CAPNS2Q96L46 248 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 SH2D3AQ9BRG2 576 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 C1orf198Q9H425 327 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 TAS2R13Q9NYV9 303 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 B3GAT1Q9P2W7 334 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 CYB5R1Q9UHQ9 305 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 TFR2Q9UP52 801 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 TCAPO15273 167 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 ATG12O94817 140 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 KLF8O95600 359 aaPredicted RBP3.56□□□□□ -1.84
NEDD4-209ENST00000508871 CRYZL1O95825 349 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 ZDHHC11BP0C7U3 371 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 LAP3P28838 519 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 GJC1P36383 396 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 PTPRRQ15256 657 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 TPRG1LQ5T0D9 272 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 RPTNQ6XPR3 784 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 GDF7Q7Z4P5 450 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 TMPRSS11BQ86T26 416 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 MFSD9Q8NBP5 474 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 OR52B6Q8NGF0 335 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 OR10W1Q8NGF6 305 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 OR8S1Q8NH09 359 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 ARNTL2Q8WYA1 636 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 FAM46AQ96IP4 442 aaKnown RBP3.56□□□□□ -1.84
NEDD4-209ENST00000508871 RHNO1Q9BSD3 238 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 DUSP22Q9NRW4 184 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 MMP24Q9Y5R2 645 aa3.56□□□□□ -1.84
NEDD4-209ENST00000508871 TSPAN11A1L157 253 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 HMX2A2RU54 273 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 C2CD4BA6NLJ0 364 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 GPR171O14626 319 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 AQP8O94778 261 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 ZFPL1O95159 310 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 APRTP07741 180 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 HOXB5P09067 269 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 PPIFP30405 207 aaKnown RBP3.55□□□□□ -1.84
NEDD4-209ENST00000508871 GUCA1AP43080 201 aaPredicted RBP3.55□□□□□ -1.84
NEDD4-209ENST00000508871 PPT1P50897 306 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 MVDP53602 400 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 RPS4XP62701 263 aaKnown RBP3.55□□□□□ -1.84
NEDD4-209ENST00000508871 DUSP8Q13202 625 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 SERTAD2Q14140 314 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 TOMM34Q15785 309 aaPredicted RBP3.55□□□□□ -1.84
NEDD4-209ENST00000508871 BSXQ3C1V8 233 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 TPTE2P1Q5T6R2 138 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 DMKNQ6E0U4 476 aaPredicted RBP3.55□□□□□ -1.84
NEDD4-209ENST00000508871 LAIR1Q6GTX8 287 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 RPL13AP3Q6NVV1 102 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 DPY19L2P2Q6ZN68 376 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 OR11L1Q8NGX0 322 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 OSR1Q8TAX0 266 aaPredicted RBP3.55□□□□□ -1.84
NEDD4-209ENST00000508871 TAMM41Q96BW9 452 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 MCEEQ96PE7 176 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 HS3ST6Q96QI5 342 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 CD207Q9UJ71 328 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 GABRQQ9UN88 632 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 ZNF106Q9H2Y7 1883 aaKnown RBP3.55□□□□□ -1.84
NEDD4-209ENST00000508871 A0A0U1RQF3 1178 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 DISC1C4P0D8 188 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 COPEO14579 308 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 YY2O15391 372 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 SHOX2O60902 331 aaPredicted RBP3.55□□□□□ -1.84
NEDD4-209ENST00000508871 ISG15P05161 165 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 COX5BP10606 129 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 CEACAM3P40198 252 aa3.55□□□□□ -1.84
NEDD4-209ENST00000508871 IDH2P48735 452 aaKnown RBP3.55□□□□□ -1.84
NEDD4-209ENST00000508871 CCNG1P51959 295 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms