RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 ITM2AO43736 263 aa7.38□□□□□ -1.23
COL4A3BP-206ENST00000508809 SYNGR3O43761 229 aa7.38□□□□□ -1.23
COL4A3BP-206ENST00000508809 SPAG7O75391 227 aa7.38□□□□□ -1.23
COL4A3BP-206ENST00000508809 NR2F1P10589 423 aa7.38□□□□□ -1.23
COL4A3BP-206ENST00000508809 ZNF35P13682 527 aa7.38□□□□□ -1.23
COL4A3BP-206ENST00000508809 COL8A2P25067 703 aa7.38□□□□□ -1.23
COL4A3BP-206ENST00000508809 CLNS1AP54105 237 aaKnown RBP7.38□□□□□ -1.23
COL4A3BP-206ENST00000508809 MRPS11P82912 194 aaKnown RBP7.38□□□□□ -1.23
COL4A3BP-206ENST00000508809 EGR4Q05215 589 aa7.38□□□□□ -1.23
COL4A3BP-206ENST00000508809 SCGB2A2Q13296 93 aa7.38□□□□□ -1.23
COL4A3BP-206ENST00000508809 CCNIQ14094 377 aa7.38□□□□□ -1.23
COL4A3BP-206ENST00000508809 DAG1Q14118 895 aa7.38□□□□□ -1.23
COL4A3BP-206ENST00000508809 JAZF1Q86VZ6 243 aa7.38□□□□□ -1.23
COL4A3BP-206ENST00000508809 PEX5LQ8IYB4 626 aa7.38□□□□□ -1.23
COL4A3BP-206ENST00000508809 KDM8Q8N371 416 aa7.38□□□□□ -1.23
COL4A3BP-206ENST00000508809 RIBC1Q8N443 379 aaPredicted RBP7.38□□□□□ -1.23
COL4A3BP-206ENST00000508809 TRIML2Q8N7C3 387 aa7.38□□□□□ -1.23
COL4A3BP-206ENST00000508809 CLDND2Q8NHS1 167 aa7.38□□□□□ -1.23
COL4A3BP-206ENST00000508809 MRPL24Q96A35 216 aaKnown RBP7.38□□□□□ -1.23
COL4A3BP-206ENST00000508809 TEX37Q96LM6 180 aa7.38□□□□□ -1.23
COL4A3BP-206ENST00000508809 OXGR1Q96P68 337 aa7.38□□□□□ -1.23
COL4A3BP-206ENST00000508809 PTDSS2Q9BVG9 487 aa7.38□□□□□ -1.23
COL4A3BP-206ENST00000508809 MS4A5Q9H3V2 200 aa7.38□□□□□ -1.23
COL4A3BP-206ENST00000508809 NOX3Q9HBY0 568 aa7.38□□□□□ -1.23
COL4A3BP-206ENST00000508809 GPR35Q9HC97 309 aa7.38□□□□□ -1.23
COL4A3BP-206ENST00000508809 HIF1ANQ9NWT6 349 aa7.38□□□□□ -1.23
COL4A3BP-206ENST00000508809 B3GAT1Q9P2W7 334 aa7.38□□□□□ -1.23
COL4A3BP-206ENST00000508809 LGALS13Q9UHV8 139 aa7.38□□□□□ -1.23
COL4A3BP-206ENST00000508809 ZNF99A8MXY4 864 aaPredicted RBP7.37□□□□□ -1.23
COL4A3BP-206ENST00000508809 WNT9BO14905 357 aa7.37□□□□□ -1.23
COL4A3BP-206ENST00000508809 TYROBPO43914 113 aa7.37□□□□□ -1.23
COL4A3BP-206ENST00000508809 SLC43A1O75387 559 aa7.37□□□□□ -1.23
COL4A3BP-206ENST00000508809 TFP02787 698 aa7.37□□□□□ -1.23
COL4A3BP-206ENST00000508809 MYZAPP0CAP1 466 aa7.37□□□□□ -1.23
COL4A3BP-206ENST00000508809 GAAP10253 952 aa7.37□□□□□ -1.23
COL4A3BP-206ENST00000508809 PNMTP11086 282 aa7.37□□□□□ -1.23
COL4A3BP-206ENST00000508809 PRG2P13727 222 aa7.37□□□□□ -1.23
COL4A3BP-206ENST00000508809 CREB1P16220 341 aa7.37□□□□□ -1.23
COL4A3BP-206ENST00000508809 ZNF43P17038 809 aa7.37□□□□□ -1.23
COL4A3BP-206ENST00000508809 ACHEP22303 614 aa7.37□□□□□ -1.23
COL4A3BP-206ENST00000508809 SDHAP31040 664 aa7.37□□□□□ -1.23
COL4A3BP-206ENST00000508809 S100A3P33764 101 aa7.37□□□□□ -1.23
COL4A3BP-206ENST00000508809 GLRXP35754 106 aa7.37□□□□□ -1.23
COL4A3BP-206ENST00000508809 GPR6P46095 362 aaPredicted RBP7.37□□□□□ -1.23
COL4A3BP-206ENST00000508809 ANXA11P50995 505 aaKnown RBP7.37□□□□□ -1.23
COL4A3BP-206ENST00000508809 MVDP53602 400 aa7.37□□□□□ -1.23
COL4A3BP-206ENST00000508809 CLDN17P56750 224 aa7.37□□□□□ -1.23
COL4A3BP-206ENST00000508809 HILS1P60008 231 aa7.37□□□□□ -1.23
COL4A3BP-206ENST00000508809 COPZ1P61923 177 aa7.37□□□□□ -1.23
COL4A3BP-206ENST00000508809 LMO4P61968 165 aa7.37□□□□□ -1.23
COL4A3BP-206ENST00000508809 IL13RA1P78552 427 aa7.37□□□□□ -1.23
COL4A3BP-206ENST00000508809 IL1RL1Q01638 556 aa7.37□□□□□ -1.23
COL4A3BP-206ENST00000508809 PDCD2Q16342 344 aaPredicted RBP7.37□□□□□ -1.23
COL4A3BP-206ENST00000508809 LIN52Q52LA3 116 aa7.37□□□□□ -1.23
COL4A3BP-206ENST00000508809 RNF220Q5VTB9 566 aa7.37□□□□□ -1.23
COL4A3BP-206ENST00000508809 ZNF836Q6ZNA1 936 aa7.37□□□□□ -1.23
COL4A3BP-206ENST00000508809 ZNF627Q7L945 461 aa7.37□□□□□ -1.23
COL4A3BP-206ENST00000508809 PEG10Q86TG7 708 aaKnown RBP7.37□□□□□ -1.23
COL4A3BP-206ENST00000508809 MDP1Q86V88 176 aa7.37□□□□□ -1.23
COL4A3BP-206ENST00000508809 CARM1Q86X55 608 aa7.37□□□□□ -1.23
COL4A3BP-206ENST00000508809 VRK2Q86Y07 508 aa7.37□□□□□ -1.23
COL4A3BP-206ENST00000508809 NUDCD3Q8IVD9 361 aa7.37□□□□□ -1.23
COL4A3BP-206ENST00000508809 CLIP4Q8N3C7 705 aa7.37□□□□□ -1.23
COL4A3BP-206ENST00000508809 CADM2Q8N3J6 435 aa7.37□□□□□ -1.23
COL4A3BP-206ENST00000508809 C3orf56Q8N813 242 aa7.37□□□□□ -1.23
COL4A3BP-206ENST00000508809 ZNF781Q8N8C0 355 aa7.37□□□□□ -1.23
COL4A3BP-206ENST00000508809 OR52P1PQ8NH57 321 aa7.37□□□□□ -1.23
COL4A3BP-206ENST00000508809 ZNF418Q8TF45 676 aaPredicted RBP7.37□□□□□ -1.23
COL4A3BP-206ENST00000508809 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.37□□□□□ -1.23
COL4A3BP-206ENST00000508809 RDH5Q92781 318 aa7.37□□□□□ -1.23
COL4A3BP-206ENST00000508809 GCDHQ92947 438 aaPredicted RBP7.37□□□□□ -1.23
COL4A3BP-206ENST00000508809 SLC35B4Q969S0 331 aa7.37□□□□□ -1.23
COL4A3BP-206ENST00000508809 LRR1Q96L50 414 aa7.37□□□□□ -1.23
COL4A3BP-206ENST00000508809 MRPL37Q9BZE1 423 aaKnown RBP7.37□□□□□ -1.23
COL4A3BP-206ENST00000508809 C20orf27Q9GZN8 174 aa7.37□□□□□ -1.23
COL4A3BP-206ENST00000508809 CRLF2Q9HC73 371 aa7.37□□□□□ -1.23
COL4A3BP-206ENST00000508809 DYNLRB1Q9NP97 96 aa7.37□□□□□ -1.23
COL4A3BP-206ENST00000508809 HAO1Q9UJM8 370 aa7.37□□□□□ -1.23
COL4A3BP-206ENST00000508809 USP22Q9UPT9 525 aa7.37□□□□□ -1.23
COL4A3BP-206ENST00000508809 GRIP1Q9Y3R0 1128 aa7.37□□□□□ -1.23
COL4A3BP-206ENST00000508809 TRIM77I1YAP6 450 aa7.36□□□□□ -1.23
COL4A3BP-206ENST00000508809 M0R233 179 aa7.36□□□□□ -1.23
COL4A3BP-206ENST00000508809 RP2O75695 350 aa7.36□□□□□ -1.23
COL4A3BP-206ENST00000508809 AHSA1O95433 338 aa7.36□□□□□ -1.23
COL4A3BP-206ENST00000508809 KRT75O95678 551 aa7.36□□□□□ -1.23
COL4A3BP-206ENST00000508809 SERPINE1P05121 402 aa7.36□□□□□ -1.23
COL4A3BP-206ENST00000508809 MSMBP08118 114 aa7.36□□□□□ -1.23
COL4A3BP-206ENST00000508809 SAGP10523 405 aaPredicted RBP7.36□□□□□ -1.23
COL4A3BP-206ENST00000508809 ZNF14P17017 642 aaPredicted RBP7.36□□□□□ -1.23
COL4A3BP-206ENST00000508809 LBPP18428 481 aa7.36□□□□□ -1.23
COL4A3BP-206ENST00000508809 IL12AP29459 219 aa7.36□□□□□ -1.23
COL4A3BP-206ENST00000508809 CDKN2CP42773 168 aa7.36□□□□□ -1.23
COL4A3BP-206ENST00000508809 RPL14P50914 215 aaKnown RBP7.36□□□□□ -1.23
COL4A3BP-206ENST00000508809 UFM1P61960 85 aa7.36□□□□□ -1.23
COL4A3BP-206ENST00000508809 LRRC74AQ0VAA2 488 aa7.36□□□□□ -1.23
COL4A3BP-206ENST00000508809 NPRL3Q12980 569 aa7.36□□□□□ -1.23
COL4A3BP-206ENST00000508809 SNTB2Q13425 540 aaKnown RBP7.36□□□□□ -1.23
COL4A3BP-206ENST00000508809 TOP3AQ13472 1001 aaPredicted RBP7.36□□□□□ -1.23
COL4A3BP-206ENST00000508809 LARS2Q15031 903 aaKnown RBP7.36□□□□□ -1.23
COL4A3BP-206ENST00000508809 CEACAM16Q2WEN9 425 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms