RNA–Protein interactions for RNA: ENST00000508619.1

LINC02171-201, Transcript of long intergenic non-protein coding RNA 2171, humanhuman

TSL 1 (best) BASIC

Gene LINC02171, Length 1,033 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02171-201ENST00000508619 ZNF566Q969W8 418 aa11.69□□□□□ -0.54
LINC02171-201ENST00000508619 SLC25A44Q96H78 314 aaPredicted RBP11.69□□□□□ -0.54
LINC02171-201ENST00000508619 SORCS2Q96PQ0 1159 aa11.69□□□□□ -0.54
LINC02171-201ENST00000508619 DOK1Q99704 481 aa11.69□□□□□ -0.54
LINC02171-201ENST00000508619 SEC61A2Q9H9S3 476 aa11.69□□□□□ -0.54
LINC02171-201ENST00000508619 NOX3Q9HBY0 568 aa11.69□□□□□ -0.54
LINC02171-201ENST00000508619 MED4Q9NPJ6 270 aa11.69□□□□□ -0.54
LINC02171-201ENST00000508619 MEPEQ9NQ76 525 aaPredicted RBP11.69□□□□□ -0.54
LINC02171-201ENST00000508619 STX18Q9P2W9 335 aaKnown RBP11.69□□□□□ -0.54
LINC02171-201ENST00000508619 SH3GLB1Q9Y371 365 aa11.69□□□□□ -0.54
LINC02171-201ENST00000508619 LOC390937A0A1W2PQ73 354 aa11.68□□□□□ -0.54
LINC02171-201ENST00000508619 A8MV72 311 aaPredicted RBP11.68□□□□□ -0.54
LINC02171-201ENST00000508619 RNF13O43567 381 aa11.68□□□□□ -0.54
LINC02171-201ENST00000508619 HLA-HP01893 362 aa11.68□□□□□ -0.54
LINC02171-201ENST00000508619 ERCC1P07992 297 aaPredicted RBP11.68□□□□□ -0.54
LINC02171-201ENST00000508619 CELA3BP08861 270 aa11.68□□□□□ -0.54
LINC02171-201ENST00000508619 ZNF35P13682 527 aa11.68□□□□□ -0.54
LINC02171-201ENST00000508619 USF1P22415 310 aaPredicted RBP11.68□□□□□ -0.54
LINC02171-201ENST00000508619 NR4A1P22736 598 aa11.68□□□□□ -0.54
LINC02171-201ENST00000508619 KDELR2P33947 212 aa11.68□□□□□ -0.54
LINC02171-201ENST00000508619 ZNF133P52736 654 aaPredicted RBP11.68□□□□□ -0.54
LINC02171-201ENST00000508619 NPRL3Q12980 569 aa11.68□□□□□ -0.54
LINC02171-201ENST00000508619 HIST3H3Q16695 136 aa11.68□□□□□ -0.54
LINC02171-201ENST00000508619 C6orf52Q5T4I8 152 aa11.68□□□□□ -0.54
LINC02171-201ENST00000508619 NANOGNBQ7Z5D8 188 aa11.68□□□□□ -0.54
LINC02171-201ENST00000508619 MYPOPQ86VE0 399 aaPredicted RBP11.68□□□□□ -0.54
LINC02171-201ENST00000508619 OR2T12Q8NG77 320 aa11.68□□□□□ -0.54
LINC02171-201ENST00000508619 RP9Q8TA86 221 aaKnown RBP11.68□□□□□ -0.54
LINC02171-201ENST00000508619 C10orf82Q8WW14 230 aa11.68□□□□□ -0.54
LINC02171-201ENST00000508619 NEU4Q8WWR8 484 aaPredicted RBP11.68□□□□□ -0.54
LINC02171-201ENST00000508619 PIMREGQ9BSJ6 248 aa11.68□□□□□ -0.54
LINC02171-201ENST00000508619 RAB1BQ9H0U4 201 aa11.68□□□□□ -0.54
LINC02171-201ENST00000508619 ZNF446Q9NWS9 450 aa11.68□□□□□ -0.54
LINC02171-201ENST00000508619 ZNF224Q9NZL3 707 aa11.68□□□□□ -0.54
LINC02171-201ENST00000508619 SPEF1Q9Y4P9 236 aa11.68□□□□□ -0.54
LINC02171-201ENST00000508619 C11orf98E9PRG8 122 aa11.67□□□□□ -0.54
LINC02171-201ENST00000508619 hCG_2039718K7EN88 272 aa11.67□□□□□ -0.54
LINC02171-201ENST00000508619 NDUFAB1O14561 156 aa11.67□□□□□ -0.54
LINC02171-201ENST00000508619 DHHO43323 396 aa11.67□□□□□ -0.54
LINC02171-201ENST00000508619 IGHG1P01857 330 aa11.67□□□□□ -0.54
LINC02171-201ENST00000508619 PGA4P0DJD7 388 aa11.67□□□□□ -0.54
LINC02171-201ENST00000508619 PGA3P0DJD8 388 aa11.67□□□□□ -0.54
LINC02171-201ENST00000508619 OR8G3PP0DMU2 310 aa11.67□□□□□ -0.54
LINC02171-201ENST00000508619 NR2C1P13056 603 aa11.67□□□□□ -0.54
LINC02171-201ENST00000508619 B4GALT1P15291 398 aa11.67□□□□□ -0.54
LINC02171-201ENST00000508619 IFNA8P32881 189 aa11.67□□□□□ -0.54
LINC02171-201ENST00000508619 THBS4P35443 961 aa11.67□□□□□ -0.54
LINC02171-201ENST00000508619 GLRXP35754 106 aa11.67□□□□□ -0.54
LINC02171-201ENST00000508619 NR4A2P43354 598 aa11.67□□□□□ -0.54
LINC02171-201ENST00000508619 CAPZA2P47755 286 aa11.67□□□□□ -0.54
LINC02171-201ENST00000508619 DAP3P51398 398 aaKnown RBP11.67□□□□□ -0.54
LINC02171-201ENST00000508619 TAS2R41P59536 307 aa11.67□□□□□ -0.54
LINC02171-201ENST00000508619 RPS23P62266 143 aaKnown RBP11.67□□□□□ -0.54
LINC02171-201ENST00000508619 DAG1Q14118 895 aa11.67□□□□□ -0.54
LINC02171-201ENST00000508619 CYBRD1Q53TN4 286 aa11.67□□□□□ -0.54
LINC02171-201ENST00000508619 HSP90B2PQ58FF3 399 aa11.67□□□□□ -0.54
LINC02171-201ENST00000508619 LRFN4Q6PJG9 635 aa11.67□□□□□ -0.54
LINC02171-201ENST00000508619 WDFY1Q8IWB7 410 aa11.67□□□□□ -0.54
LINC02171-201ENST00000508619 SLC22A24Q8N4F4 322 aa11.67□□□□□ -0.54
LINC02171-201ENST00000508619 TMEM239Q8WW34 195 aa11.67□□□□□ -0.54
LINC02171-201ENST00000508619 MRPL13Q9BYD1 178 aaKnown RBP11.67□□□□□ -0.54
LINC02171-201ENST00000508619 C1orf198Q9H425 327 aa11.67□□□□□ -0.54
LINC02171-201ENST00000508619 SMURF2Q9HAU4 748 aa11.67□□□□□ -0.54
LINC02171-201ENST00000508619 TMEM38BQ9NVV0 291 aa11.67□□□□□ -0.54
LINC02171-201ENST00000508619 RIMS3Q9UJD0 308 aa11.67□□□□□ -0.54
LINC02171-201ENST00000508619 ADAM21Q9UKJ8 722 aa11.67□□□□□ -0.54
LINC02171-201ENST00000508619 CMAHPQ9Y471 501 aa11.67□□□□□ -0.54
LINC02171-201ENST00000508619 LOC100653049A0A140TA62 436 aa11.66□□□□□ -0.54
LINC02171-201ENST00000508619 A0A1W2PRG6 482 aa11.66□□□□□ -0.54
LINC02171-201ENST00000508619 TMEM129A0AVI4 362 aa11.66□□□□□ -0.54
LINC02171-201ENST00000508619 ELOVL7A1L3X0 281 aa11.66□□□□□ -0.54
LINC02171-201ENST00000508619 KPNA4O00629 521 aaPredicted RBP11.66□□□□□ -0.54
LINC02171-201ENST00000508619 CCDC22O60826 627 aa11.66□□□□□ -0.54
LINC02171-201ENST00000508619 KRT34O76011 436 aa11.66□□□□□ -0.54
LINC02171-201ENST00000508619 SEC14L2O76054 403 aa11.66□□□□□ -0.54
LINC02171-201ENST00000508619 OR7A10O76100 309 aa11.66□□□□□ -0.54
LINC02171-201ENST00000508619 FARS2O95363 451 aaKnown RBP11.66□□□□□ -0.54
LINC02171-201ENST00000508619 RAB36O95755 333 aa11.66□□□□□ -0.54
LINC02171-201ENST00000508619 BCL10O95999 233 aa11.66□□□□□ -0.54
LINC02171-201ENST00000508619 SERPINA5P05154 406 aa11.66□□□□□ -0.54
LINC02171-201ENST00000508619 CD79AP11912 226 aa11.66□□□□□ -0.54
LINC02171-201ENST00000508619 GIFP27352 417 aa11.66□□□□□ -0.54
LINC02171-201ENST00000508619 GZMKP49863 264 aa11.66□□□□□ -0.54
LINC02171-201ENST00000508619 RAB1AP62820 205 aa11.66□□□□□ -0.54
LINC02171-201ENST00000508619 SELENOWP63302 87 aa11.66□□□□□ -0.54
LINC02171-201ENST00000508619 LSM11P83369 360 aaKnown RBP eCLIP11.66□□□□□ -0.54
LINC02171-201ENST00000508619 SNTB2Q13425 540 aaKnown RBP11.66□□□□□ -0.54
LINC02171-201ENST00000508619 TAF11Q15544 211 aa11.66□□□□□ -0.54
LINC02171-201ENST00000508619 FXNQ16595 210 aa11.66□□□□□ -0.54
LINC02171-201ENST00000508619 VHLLQ6RSH7 139 aa11.66□□□□□ -0.54
LINC02171-201ENST00000508619 MICU2Q8IYU8 434 aa11.66□□□□□ -0.54
LINC02171-201ENST00000508619 LRRC17Q8N6Y2 441 aa11.66□□□□□ -0.54
LINC02171-201ENST00000508619 LZICQ8WZA0 190 aa11.66□□□□□ -0.54
LINC02171-201ENST00000508619 HTRA1Q92743 480 aa11.66□□□□□ -0.54
LINC02171-201ENST00000508619 MRPL24Q96A35 216 aaKnown RBP11.66□□□□□ -0.54
LINC02171-201ENST00000508619 SGTBQ96EQ0 304 aa11.66□□□□□ -0.54
LINC02171-201ENST00000508619 PRRC1Q96M27 445 aa11.66□□□□□ -0.54
LINC02171-201ENST00000508619 HOPXQ9BPY8 73 aaPredicted RBP11.66□□□□□ -0.54
LINC02171-201ENST00000508619 YAE1D1Q9NRH1 226 aa11.66□□□□□ -0.54
LINC02171-201ENST00000508619 LPAR3Q9UBY5 353 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms