RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 FNDC8Q8TC99 324 aa17.33■□□□□ 0.36
SFXN1-209ENST00000508290 SEPHS2Q99611 448 aa17.33■□□□□ 0.36
SFXN1-209ENST00000508290 FOXB1Q99853 325 aa17.33■□□□□ 0.36
SFXN1-209ENST00000508290 KRCC1Q9NPI7 259 aaPredicted RBP17.33■□□□□ 0.36
SFXN1-209ENST00000508290 EGFL7Q9UHF1 273 aa17.33■□□□□ 0.36
SFXN1-209ENST00000508290 TMEM5Q9Y2B1 443 aa17.33■□□□□ 0.36
SFXN1-209ENST00000508290 ATP23Q9Y6H3 246 aa17.33■□□□□ 0.36
SFXN1-209ENST00000508290 ROS1P08922 2347 aa17.33■□□□□ 0.36
SFXN1-209ENST00000508290 DSCAMO60469 2012 aa17.32■□□□□ 0.36
SFXN1-209ENST00000508290 A0A1W2PRQ8 180 aa17.32■□□□□ 0.36
SFXN1-209ENST00000508290 VSTM5A8MXK1 200 aa17.32■□□□□ 0.36
SFXN1-209ENST00000508290 PDE5AO76074 875 aa17.32■□□□□ 0.36
SFXN1-209ENST00000508290 PRSS23O95084 383 aa17.32■□□□□ 0.36
SFXN1-209ENST00000508290 UBL3O95164 117 aa17.32■□□□□ 0.36
SFXN1-209ENST00000508290 PGA4P0DJD7 388 aa17.32■□□□□ 0.36
SFXN1-209ENST00000508290 PGA3P0DJD8 388 aa17.32■□□□□ 0.36
SFXN1-209ENST00000508290 SAGP10523 405 aaPredicted RBP17.32■□□□□ 0.36
SFXN1-209ENST00000508290 NCK1P16333 377 aa17.32■□□□□ 0.36
SFXN1-209ENST00000508290 RHCEP18577 417 aa17.32■□□□□ 0.36
SFXN1-209ENST00000508290 FABP6P51161 128 aa17.32■□□□□ 0.36
SFXN1-209ENST00000508290 MXRA7P84157 204 aa17.32■□□□□ 0.36
SFXN1-209ENST00000508290 PRKCDQ05655 676 aa17.32■□□□□ 0.36
SFXN1-209ENST00000508290 SPOCK1Q08629 439 aa17.32■□□□□ 0.36
SFXN1-209ENST00000508290 DGCR6Q14129 220 aa17.32■□□□□ 0.36
SFXN1-209ENST00000508290 GSG1Q2KHT4 349 aa17.32■□□□□ 0.36
SFXN1-209ENST00000508290 PHYHD1Q5SRE7 291 aa17.32■□□□□ 0.36
SFXN1-209ENST00000508290 ZNF730Q6ZMV8 503 aa17.32■□□□□ 0.36
SFXN1-209ENST00000508290 MBOAT2Q6ZWT7 520 aa17.32■□□□□ 0.36
SFXN1-209ENST00000508290 BIVMQ86UB2 503 aa17.32■□□□□ 0.36
SFXN1-209ENST00000508290 CCDC197Q8NCU1 140 aa17.32■□□□□ 0.36
SFXN1-209ENST00000508290 ZNF837Q96EG3 531 aaPredicted RBP17.32■□□□□ 0.36
SFXN1-209ENST00000508290 SMURF2Q9HAU4 748 aa17.32■□□□□ 0.36
SFXN1-209ENST00000508290 MAN2C1Q9NTJ4 1040 aa17.32■□□□□ 0.36
SFXN1-209ENST00000508290 MOKQ9UQ07 419 aa17.32■□□□□ 0.36
SFXN1-209ENST00000508290 MAP1AP78559 2803 aaPredicted RBP17.32■□□□□ 0.36
SFXN1-209ENST00000508290 TEP1Q99973 2627 aaKnown RBP17.32■□□□□ 0.36
SFXN1-209ENST00000508290 ATP6V1G2-DDX39BF2Z307 99 aa17.31■□□□□ 0.36
SFXN1-209ENST00000508290 FFAR1O14842 300 aa17.31■□□□□ 0.36
SFXN1-209ENST00000508290 FARS2O95363 451 aaKnown RBP17.31■□□□□ 0.36
SFXN1-209ENST00000508290 CECR9P0C854 216 aa17.31■□□□□ 0.36
SFXN1-209ENST00000508290 AQP2P41181 271 aa17.31■□□□□ 0.36
SFXN1-209ENST00000508290 CAPZA2P47755 286 aa17.31■□□□□ 0.36
SFXN1-209ENST00000508290 CLRN1P58418 232 aa17.31■□□□□ 0.36
SFXN1-209ENST00000508290 SMIM11AP58511 58 aa17.31■□□□□ 0.36
SFXN1-209ENST00000508290 NAAAQ02083 359 aa17.31■□□□□ 0.36
SFXN1-209ENST00000508290 HIST3H3Q16695 136 aa17.31■□□□□ 0.36
SFXN1-209ENST00000508290 ALG10Q5BKT4 473 aa17.31■□□□□ 0.36
SFXN1-209ENST00000508290 NRMQ8IXM6 262 aa17.31■□□□□ 0.36
SFXN1-209ENST00000508290 FAM156AQ8NDB6 213 aa17.31■□□□□ 0.36
SFXN1-209ENST00000508290 NOXO1Q8NFA2 376 aa17.31■□□□□ 0.36
SFXN1-209ENST00000508290 ASB10Q8WXI3 467 aa17.31■□□□□ 0.36
SFXN1-209ENST00000508290 POP5Q969H6 163 aaKnown RBP17.31■□□□□ 0.36
SFXN1-209ENST00000508290 MRPL13Q9BYD1 178 aaKnown RBP17.31■□□□□ 0.36
SFXN1-209ENST00000508290 NMNAT1Q9HAN9 279 aaPredicted RBP17.31■□□□□ 0.36
SFXN1-209ENST00000508290 ARL8BQ9NVJ2 186 aa17.31■□□□□ 0.36
SFXN1-209ENST00000508290 CD300AQ9UGN4 299 aa17.31■□□□□ 0.36
SFXN1-209ENST00000508290 SNX13Q9Y5W8 968 aa17.31■□□□□ 0.36
SFXN1-209ENST00000508290 EFCAB9A8MZ26 197 aa17.3■□□□□ 0.36
SFXN1-209ENST00000508290 DHHO43323 396 aa17.3■□□□□ 0.36
SFXN1-209ENST00000508290 CD8AP01732 235 aa17.3■□□□□ 0.36
SFXN1-209ENST00000508290 F13BP05160 661 aa17.3■□□□□ 0.36
SFXN1-209ENST00000508290 H1F0P07305 194 aaKnown RBP17.3■□□□□ 0.36
SFXN1-209ENST00000508290 ACADSP16219 412 aa17.3■□□□□ 0.36
SFXN1-209ENST00000508290 YAP1P46937 504 aaKnown RBP17.3■□□□□ 0.36
SFXN1-209ENST00000508290 ZNF84P51523 738 aa17.3■□□□□ 0.36
SFXN1-209ENST00000508290 TMPRSS11FQ6ZWK6 438 aa17.3■□□□□ 0.36
SFXN1-209ENST00000508290 OAFQ86UD1 273 aa17.3■□□□□ 0.36
SFXN1-209ENST00000508290 RNF148Q8N7C7 305 aa17.3■□□□□ 0.36
SFXN1-209ENST00000508290 NUP37Q8NFH4 326 aa17.3■□□□□ 0.36
SFXN1-209ENST00000508290 MCUR1Q96AQ8 359 aa17.3■□□□□ 0.36
SFXN1-209ENST00000508290 Q96MF0 132 aa17.3■□□□□ 0.36
SFXN1-209ENST00000508290 NSMCE2Q96MF7 247 aa17.3■□□□□ 0.36
SFXN1-209ENST00000508290 CDRT15Q96T59 188 aa17.3■□□□□ 0.36
SFXN1-209ENST00000508290 TXNIPQ9H3M7 391 aa17.3■□□□□ 0.36
SFXN1-209ENST00000508290 B3GNT2Q9NY97 397 aa17.3■□□□□ 0.36
SFXN1-209ENST00000508290 NDUFAF4Q9P032 175 aa17.3■□□□□ 0.36
SFXN1-209ENST00000508290 PRR14LQ5THK1 2151 aa17.3■□□□□ 0.36
SFXN1-209ENST00000508290 A0A087WUU8 490 aa17.29■□□□□ 0.36
SFXN1-209ENST00000508290 H7C417 338 aa17.29■□□□□ 0.36
SFXN1-209ENST00000508290 J3KTA2 159 aa17.29■□□□□ 0.36
SFXN1-209ENST00000508290 RAB36O95755 333 aa17.29■□□□□ 0.36
SFXN1-209ENST00000508290 IGHMP01871 453 aa17.29■□□□□ 0.36
SFXN1-209ENST00000508290 OR8G3PP0DMU2 310 aa17.29■□□□□ 0.36
SFXN1-209ENST00000508290 B4GALT1P15291 398 aa17.29■□□□□ 0.36
SFXN1-209ENST00000508290 ZNF133P52736 654 aaPredicted RBP17.29■□□□□ 0.36
SFXN1-209ENST00000508290 RIPPLY3P57055 190 aa17.29■□□□□ 0.36
SFXN1-209ENST00000508290 MELKQ14680 651 aa17.29■□□□□ 0.36
SFXN1-209ENST00000508290 ARMC4Q5T2S8 1044 aa17.29■□□□□ 0.36
SFXN1-209ENST00000508290 C11orf71Q6IPW1 123 aa17.29■□□□□ 0.36
SFXN1-209ENST00000508290 B3GLCTQ6Y288 498 aa17.29■□□□□ 0.36
SFXN1-209ENST00000508290 MDP1Q86V88 176 aa17.29■□□□□ 0.36
SFXN1-209ENST00000508290 DEFB107AQ8IZN7 70 aa17.29■□□□□ 0.36
SFXN1-209ENST00000508290 FITM2Q8N6M3 262 aa17.29■□□□□ 0.36
SFXN1-209ENST00000508290 PYURFQ96I23 114 aa17.29■□□□□ 0.36
SFXN1-209ENST00000508290 ALG12Q9BV10 488 aa17.29■□□□□ 0.36
SFXN1-209ENST00000508290 MUC13Q9H3R2 512 aa17.29■□□□□ 0.36
SFXN1-209ENST00000508290 ZNF442Q9H7R0 627 aa17.29■□□□□ 0.36
SFXN1-209ENST00000508290 CA10Q9NS85 328 aa17.29■□□□□ 0.36
SFXN1-209ENST00000508290 RHCGQ9UBD6 479 aa17.29■□□□□ 0.36
SFXN1-209ENST00000508290 PMF1-BGLAPU3KQ54 211 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms