RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 ERICH5Q6P6B1 374 aa7.18□□□□□ -1.26
SCN1A-207ENST00000507401 MSANTD1Q6ZTZ1 278 aa7.18□□□□□ -1.26
SCN1A-207ENST00000507401 SZRD1Q7Z422 152 aa7.18□□□□□ -1.26
SCN1A-207ENST00000507401 GGNQ86UU5 652 aa7.18□□□□□ -1.26
SCN1A-207ENST00000507401 CDC20BQ86Y33 519 aa7.18□□□□□ -1.26
SCN1A-207ENST00000507401 P3H2Q8IVL5 708 aa7.18□□□□□ -1.26
SCN1A-207ENST00000507401 SLC38A6Q8IZM9 456 aa7.18□□□□□ -1.26
SCN1A-207ENST00000507401 GCNT2Q8N0V5 402 aa7.18□□□□□ -1.26
SCN1A-207ENST00000507401 KRTCAP2Q8N6L1 136 aa7.18□□□□□ -1.26
SCN1A-207ENST00000507401 ZNF527Q8NB42 609 aa7.18□□□□□ -1.26
SCN1A-207ENST00000507401 VPS37AQ8NEZ2 397 aa7.18□□□□□ -1.26
SCN1A-207ENST00000507401 LILRB1Q8NHL6 650 aaPredicted RBP7.18□□□□□ -1.26
SCN1A-207ENST00000507401 LINC01560Q8TB33 94 aa7.18□□□□□ -1.26
SCN1A-207ENST00000507401 AP3S1Q92572 193 aa7.18□□□□□ -1.26
SCN1A-207ENST00000507401 SLC47A1Q96FL8 570 aa7.18□□□□□ -1.26
SCN1A-207ENST00000507401 PPP1R36Q96LQ0 422 aa7.18□□□□□ -1.26
SCN1A-207ENST00000507401 TRNT1Q96Q11 434 aaKnown RBP7.18□□□□□ -1.26
SCN1A-207ENST00000507401 SPATA9Q9BWV2 254 aa7.18□□□□□ -1.26
SCN1A-207ENST00000507401 CDADC1Q9BWV3 514 aa7.18□□□□□ -1.26
SCN1A-207ENST00000507401 AMBRA1Q9C0C7 1298 aa7.18□□□□□ -1.26
SCN1A-207ENST00000507401 CXXC4Q9H2H0 198 aa7.18□□□□□ -1.26
SCN1A-207ENST00000507401 CXorf36Q9H7Y0 433 aa7.18□□□□□ -1.26
SCN1A-207ENST00000507401 GLRX2Q9NS18 164 aa7.18□□□□□ -1.26
SCN1A-207ENST00000507401 MED9Q9NWA0 146 aa7.18□□□□□ -1.26
SCN1A-207ENST00000507401 FBXO34Q9NWN3 711 aa7.18□□□□□ -1.26
SCN1A-207ENST00000507401 CNOT2Q9NZN8 540 aaKnown RBP7.18□□□□□ -1.26
SCN1A-207ENST00000507401 GIMAP2Q9UG22 337 aa7.18□□□□□ -1.26
SCN1A-207ENST00000507401 GMPPBQ9Y5P6 360 aa7.18□□□□□ -1.26
SCN1A-207ENST00000507401 SNX8Q9Y5X2 465 aa7.18□□□□□ -1.26
SCN1A-207ENST00000507401 AKAP9Q99996 3911 aa7.18□□□□□ -1.26
SCN1A-207ENST00000507401 ITPR3Q14573 2671 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 F8P00451 2351 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 HRNRQ86YZ3 2850 aaPredicted RBP7.17□□□□□ -1.26
SCN1A-207ENST00000507401 IQCMA0A1B0GVH7 501 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 ELOVL7A1L3X0 281 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 EFCAB10A6NFE3 127 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 C12orf71A8MTZ7 269 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 NPIPB9F8W1W9 429 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 H3BML4 177 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 hCG_2039718K7EN88 272 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 RNASET2O00584 256 aaKnown RBP7.17□□□□□ -1.26
SCN1A-207ENST00000507401 CTDSP2O14595 271 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 CASKO14936 926 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 NDUFA2O43678 99 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 SCN2BO60939 215 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 FAM20BO75063 409 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 C6orf47O95873 294 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 AGR2O95994 175 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 AK1P00568 194 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 CGAP01215 116 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 MT-ND2P03891 347 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 FPR1P21462 350 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 MYL9P24844 172 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 CD79BP40259 229 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 ZNF41P51814 821 aaPredicted RBP7.17□□□□□ -1.26
SCN1A-207ENST00000507401 NKX2-5P52952 324 aaPredicted RBP7.17□□□□□ -1.26
SCN1A-207ENST00000507401 ART1P52961 327 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 SUMO3P55854 103 aaPredicted RBP7.17□□□□□ -1.26
SCN1A-207ENST00000507401 CLDN20P56880 219 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 DSTNP60981 165 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 RAB14P61106 215 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 HBA1P69905 142 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 MRPL28Q13084 256 aaKnown RBP7.17□□□□□ -1.26
SCN1A-207ENST00000507401 MAD2L1BPQ15013 274 aaPredicted RBP7.17□□□□□ -1.26
SCN1A-207ENST00000507401 GUSBP1Q15486 140 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 TIGD6Q17RP2 521 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 PLPPR5Q32ZL2 321 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 ZIK1Q3SY52 487 aaPredicted RBP7.17□□□□□ -1.26
SCN1A-207ENST00000507401 SPDYE7PQ495Y7 208 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 PDSS1Q5T2R2 415 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 ANXA8L1Q5VT79 327 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 HACD4Q5VWC8 232 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 RNLSQ5VYX0 342 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 FAM205BPQ63HN1 556 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 KDM4DQ6B0I6 523 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 TBPL2Q6SJ96 375 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 TMPRSS11AQ6ZMR5 421 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 ESPNLQ6ZVH7 1005 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 FAM214BQ7L5A3 538 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 C6orf120Q7Z4R8 191 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 ZAR1Q86SH2 424 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 CADM2Q8N3J6 435 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 OR2T12Q8NG77 320 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 OR5M1Q8NGP8 315 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 FNDC9Q8TBE3 224 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 OIT3Q8WWZ8 545 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 DEDD2Q8WXF8 326 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 SMPDL3BQ92485 455 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 CDS1Q92903 461 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 SNAPC3Q92966 411 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 TESCQ96BS2 214 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 MBD6Q96DN6 1003 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 ZNF845Q96IR2 970 aaPredicted RBP7.17□□□□□ -1.26
SCN1A-207ENST00000507401 ADGRG7Q96K78 797 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 SEPHS2Q99611 448 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 YIPF4Q9BSR8 244 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 PINK1Q9BXM7 581 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 RNF121Q9H920 327 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 PLSCR4Q9NRQ2 329 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 DCAF13Q9NV06 445 aaKnown RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms