RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 SLC39A5Q6ZMH5 540 aa16.15■□□□□ 0.18
NUP54-205ENST00000507257 CDC20BQ86Y33 519 aa16.15■□□□□ 0.18
NUP54-205ENST00000507257 ZPLD1Q8TCW7 415 aa16.15■□□□□ 0.18
NUP54-205ENST00000507257 NARS2Q96I59 477 aaKnown RBP16.15■□□□□ 0.18
NUP54-205ENST00000507257 TMEM185BQ9H7F4 350 aa16.15■□□□□ 0.18
NUP54-205ENST00000507257 FKRPQ9H9S5 495 aa16.15■□□□□ 0.18
NUP54-205ENST00000507257 MBNL1Q9NR56 388 aaKnown RBP16.15■□□□□ 0.18
NUP54-205ENST00000507257 TRAV18A0A075B6X5 111 aa16.14■□□□□ 0.17
NUP54-205ENST00000507257 LOC100289279A0A1B0GTE1 492 aa16.14■□□□□ 0.17
NUP54-205ENST00000507257 ABHD14A-ACY1A0A1B0GW23 586 aa16.14■□□□□ 0.17
NUP54-205ENST00000507257 RNF222A6NCQ9 220 aa16.14■□□□□ 0.17
NUP54-205ENST00000507257 OR52A4PA6NMU1 304 aa16.14■□□□□ 0.17
NUP54-205ENST00000507257 EFCAB7A8K855 629 aa16.14■□□□□ 0.17
NUP54-205ENST00000507257 F8W036 122 aa16.14■□□□□ 0.17
NUP54-205ENST00000507257 GPR75O95800 540 aa16.14■□□□□ 0.17
NUP54-205ENST00000507257 APOC1P02654 83 aa16.14■□□□□ 0.17
NUP54-205ENST00000507257 RFC3P40938 356 aa16.14■□□□□ 0.17
NUP54-205ENST00000507257 SOX2P48431 317 aa16.14■□□□□ 0.17
NUP54-205ENST00000507257 EMDP50402 254 aa16.14■□□□□ 0.17
NUP54-205ENST00000507257 HTRA4P83105 476 aaPredicted RBP16.14■□□□□ 0.17
NUP54-205ENST00000507257 EGR3Q06889 387 aa16.14■□□□□ 0.17
NUP54-205ENST00000507257 RASGEF1BQ0VAM2 473 aa16.14■□□□□ 0.17
NUP54-205ENST00000507257 FAM166AQ6J272 317 aa16.14■□□□□ 0.17
NUP54-205ENST00000507257 ZNF813Q6ZN06 617 aa16.14■□□□□ 0.17
NUP54-205ENST00000507257 ZAR1Q86SH2 424 aa16.14■□□□□ 0.17
NUP54-205ENST00000507257 PUSL1Q8N0Z8 303 aaKnown RBP16.14■□□□□ 0.17
NUP54-205ENST00000507257 OR1M1Q8NGA1 313 aa16.14■□□□□ 0.17
NUP54-205ENST00000507257 OR2G2Q8NGZ5 317 aa16.14■□□□□ 0.17
NUP54-205ENST00000507257 LIPHQ8WWY8 451 aa16.14■□□□□ 0.17
NUP54-205ENST00000507257 LMAN2LQ9H0V9 348 aa16.14■□□□□ 0.17
NUP54-205ENST00000507257 COMMD9Q9P000 198 aa16.14■□□□□ 0.17
NUP54-205ENST00000507257 SLC17A4Q9Y2C5 497 aa16.14■□□□□ 0.17
NUP54-205ENST00000507257 OR1A2Q9Y585 309 aa16.14■□□□□ 0.17
NUP54-205ENST00000507257 COLEC10Q9Y6Z7 277 aa16.14■□□□□ 0.17
NUP54-205ENST00000507257 OR6C74A6NCV1 312 aa16.13■□□□□ 0.17
NUP54-205ENST00000507257 SLC17A2O00624 439 aa16.13■□□□□ 0.17
NUP54-205ENST00000507257 RAD1O60671 282 aa16.13■□□□□ 0.17
NUP54-205ENST00000507257 IFNA4P05014 189 aa16.13■□□□□ 0.17
NUP54-205ENST00000507257 GUCA2AQ02747 115 aa16.13■□□□□ 0.17
NUP54-205ENST00000507257 ZNF141Q15928 474 aa16.13■□□□□ 0.17
NUP54-205ENST00000507257 DEFB134Q4QY38 66 aa16.13■□□□□ 0.17
NUP54-205ENST00000507257 FDX2Q6P4F2 183 aa16.13■□□□□ 0.17
NUP54-205ENST00000507257 HAGHLQ6PII5 290 aaPredicted RBP16.13■□□□□ 0.17
NUP54-205ENST00000507257 LDLRAD3Q86YD5 345 aa16.13■□□□□ 0.17
NUP54-205ENST00000507257 DMBX1Q8NFW5 382 aa16.13■□□□□ 0.17
NUP54-205ENST00000507257 TMEM106AQ96A25 262 aa16.13■□□□□ 0.17
NUP54-205ENST00000507257 SLC22A18Q96BI1 424 aa16.13■□□□□ 0.17
NUP54-205ENST00000507257 ADAD1Q96M93 576 aaKnown RBP16.13■□□□□ 0.17
NUP54-205ENST00000507257 OR2A5Q96R48 311 aa16.13■□□□□ 0.17
NUP54-205ENST00000507257 VRK1Q99986 396 aaPredicted RBP16.13■□□□□ 0.17
NUP54-205ENST00000507257 LMF2Q9BU23 707 aaKnown RBP16.13■□□□□ 0.17
NUP54-205ENST00000507257 TWSG1Q9GZX9 223 aa16.13■□□□□ 0.17
NUP54-205ENST00000507257 SPACA6W5XKT8 324 aa16.13■□□□□ 0.17
NUP54-205ENST00000507257 A0A0A6YYH2 397 aa16.13■□□□□ 0.17
NUP54-205ENST00000507257 TMEM72A0PK05 275 aa16.13■□□□□ 0.17
NUP54-205ENST00000507257 A6NJ64 397 aa16.13■□□□□ 0.17
NUP54-205ENST00000507257 LRRC72A6NJI9 287 aa16.13■□□□□ 0.17
NUP54-205ENST00000507257 PSMD9O00233 223 aa16.13■□□□□ 0.17
NUP54-205ENST00000507257 P2RX6O15547 441 aa16.13■□□□□ 0.17
NUP54-205ENST00000507257 RAB3DO95716 219 aa16.13■□□□□ 0.17
NUP54-205ENST00000507257 CD74P04233 296 aa16.13■□□□□ 0.17
NUP54-205ENST00000507257 HEXAP06865 529 aa16.13■□□□□ 0.17
NUP54-205ENST00000507257 POU3F4P49335 361 aa16.13■□□□□ 0.17
NUP54-205ENST00000507257 ZNF528Q3MIS6 628 aa16.13■□□□□ 0.17
NUP54-205ENST00000507257 FBXO42Q6P3S6 717 aa16.13■□□□□ 0.17
NUP54-205ENST00000507257 ABHD13Q7L211 337 aa16.13■□□□□ 0.17
NUP54-205ENST00000507257 SPAG16Q8N0X2 631 aa16.13■□□□□ 0.17
NUP54-205ENST00000507257 OR51D1Q8NGF3 324 aa16.13■□□□□ 0.17
NUP54-205ENST00000507257 STOML3Q8TAV4 291 aa16.13■□□□□ 0.17
NUP54-205ENST00000507257 HERVK_113Q902F9 699 aa16.13■□□□□ 0.17
NUP54-205ENST00000507257 RASD2Q96D21 266 aa16.13■□□□□ 0.17
NUP54-205ENST00000507257 DEC1Q9P2X7 70 aa16.13■□□□□ 0.17
NUP54-205ENST00000507257 CPNE7Q9UBL6 633 aa16.13■□□□□ 0.17
NUP54-205ENST00000507257 PCDHB10Q9UN67 800 aa16.13■□□□□ 0.17
NUP54-205ENST00000507257 PLEKHA6Q9Y2H5 1048 aa16.13■□□□□ 0.17
NUP54-205ENST00000507257 KLHDC2Q9Y2U9 406 aa16.13■□□□□ 0.17
NUP54-205ENST00000507257 A0A1B0GVT2 93 aa16.12■□□□□ 0.17
NUP54-205ENST00000507257 PRSS44E7EML9 344 aa16.12■□□□□ 0.17
NUP54-205ENST00000507257 NPIPB9F8W1W9 429 aa16.12■□□□□ 0.17
NUP54-205ENST00000507257 TNFSF14O43557 240 aa16.12■□□□□ 0.17
NUP54-205ENST00000507257 DOK2O60496 412 aa16.12■□□□□ 0.17
NUP54-205ENST00000507257 RPP14O95059 124 aaKnown RBP16.12■□□□□ 0.17
NUP54-205ENST00000507257 TXNDC12O95881 172 aa16.12■□□□□ 0.17
NUP54-205ENST00000507257 MAS1P04201 325 aa16.12■□□□□ 0.17
NUP54-205ENST00000507257 CEACAM5P06731 702 aa16.12■□□□□ 0.17
NUP54-205ENST00000507257 CD37P11049 281 aa16.12■□□□□ 0.17
NUP54-205ENST00000507257 PVALBP20472 110 aaPredicted RBP16.12■□□□□ 0.17
NUP54-205ENST00000507257 DRD3P35462 400 aa16.12■□□□□ 0.17
NUP54-205ENST00000507257 FNTBP49356 437 aa16.12■□□□□ 0.17
NUP54-205ENST00000507257 EFNB2P52799 333 aa16.12■□□□□ 0.17
NUP54-205ENST00000507257 SNRPNP63162 240 aaKnown RBP16.12■□□□□ 0.17
NUP54-205ENST00000507257 UBE2IP63279 158 aaKnown RBP16.12■□□□□ 0.17
NUP54-205ENST00000507257 FCRL6Q6DN72 434 aa16.12■□□□□ 0.17
NUP54-205ENST00000507257 C3orf33Q6P1S2 294 aa16.12■□□□□ 0.17
NUP54-205ENST00000507257 LEG1Q6P5S2 330 aa16.12■□□□□ 0.17
NUP54-205ENST00000507257 NDUFAF7Q7L592 441 aa16.12■□□□□ 0.17
NUP54-205ENST00000507257 FAM122BQ7Z309 247 aa16.12■□□□□ 0.17
NUP54-205ENST00000507257 SUSD6Q92537 303 aa16.12■□□□□ 0.17
NUP54-205ENST00000507257 FAM3DQ96BQ1 224 aa16.12■□□□□ 0.17
NUP54-205ENST00000507257 LRRC3BQ96PB8 259 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms