RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 OPN1SWP03999 348 aa12.48□□□□□ -0.41
HMGCS1-203ENST00000507004 OR8G3PP0DMU2 310 aa12.48□□□□□ -0.41
HMGCS1-203ENST00000507004 IGHV4-31P0DP07 118 aa12.48□□□□□ -0.41
HMGCS1-203ENST00000507004 THRBP10828 461 aa12.48□□□□□ -0.41
HMGCS1-203ENST00000507004 IFNGR1P15260 489 aa12.48□□□□□ -0.41
HMGCS1-203ENST00000507004 H2AFXP16104 143 aaPredicted RBP12.48□□□□□ -0.41
HMGCS1-203ENST00000507004 ZNF23P17027 643 aa12.48□□□□□ -0.41
HMGCS1-203ENST00000507004 GIFP27352 417 aa12.48□□□□□ -0.41
HMGCS1-203ENST00000507004 BIDP55957 195 aa12.48□□□□□ -0.41
HMGCS1-203ENST00000507004 RAB1AP62820 205 aa12.48□□□□□ -0.41
HMGCS1-203ENST00000507004 CAMK2DQ13557 499 aa12.48□□□□□ -0.41
HMGCS1-203ENST00000507004 GGTLC2Q14390 218 aa12.48□□□□□ -0.41
HMGCS1-203ENST00000507004 NANOGNBQ7Z5D8 188 aa12.48□□□□□ -0.41
HMGCS1-203ENST00000507004 ZNF786Q8N393 782 aa12.48□□□□□ -0.41
HMGCS1-203ENST00000507004 HPS1Q92902 700 aa12.48□□□□□ -0.41
HMGCS1-203ENST00000507004 TMEM54Q969K7 222 aa12.48□□□□□ -0.41
HMGCS1-203ENST00000507004 TAMM41Q96BW9 452 aa12.48□□□□□ -0.41
HMGCS1-203ENST00000507004 ZNF837Q96EG3 531 aaPredicted RBP12.48□□□□□ -0.41
HMGCS1-203ENST00000507004 TXNDC15Q96J42 360 aa12.48□□□□□ -0.41
HMGCS1-203ENST00000507004 MDFIQ99750 246 aa12.48□□□□□ -0.41
HMGCS1-203ENST00000507004 GID8Q9NWU2 228 aa12.48□□□□□ -0.41
HMGCS1-203ENST00000507004 SLC7A8Q9UHI5 535 aa12.48□□□□□ -0.41
HMGCS1-203ENST00000507004 GPR160Q9UJ42 338 aa12.48□□□□□ -0.41
HMGCS1-203ENST00000507004 ZNF346Q9UL40 294 aaKnown RBP12.48□□□□□ -0.41
HMGCS1-203ENST00000507004 SLC7A7Q9UM01 511 aa12.48□□□□□ -0.41
HMGCS1-203ENST00000507004 GMNCA6NCL1 334 aa12.47□□□□□ -0.41
HMGCS1-203ENST00000507004 M0R233 179 aa12.47□□□□□ -0.41
HMGCS1-203ENST00000507004 SYNGR3O43761 229 aa12.47□□□□□ -0.41
HMGCS1-203ENST00000507004 OR5F1O95221 314 aa12.47□□□□□ -0.41
HMGCS1-203ENST00000507004 STAMBPO95630 424 aa12.47□□□□□ -0.41
HMGCS1-203ENST00000507004 CH25HO95992 272 aa12.47□□□□□ -0.41
HMGCS1-203ENST00000507004 BCL10O95999 233 aa12.47□□□□□ -0.41
HMGCS1-203ENST00000507004 IGHG1P01857 330 aa12.47□□□□□ -0.41
HMGCS1-203ENST00000507004 HLA-HP01893 362 aa12.47□□□□□ -0.41
HMGCS1-203ENST00000507004 CELA3BP08861 270 aa12.47□□□□□ -0.41
HMGCS1-203ENST00000507004 ASAH2BP0C7U1 165 aa12.47□□□□□ -0.41
HMGCS1-203ENST00000507004 UMPSP11172 480 aa12.47□□□□□ -0.41
HMGCS1-203ENST00000507004 DAOP14920 347 aa12.47□□□□□ -0.41
HMGCS1-203ENST00000507004 B4GALT1P15291 398 aa12.47□□□□□ -0.41
HMGCS1-203ENST00000507004 ZNF14P17017 642 aaPredicted RBP12.47□□□□□ -0.41
HMGCS1-203ENST00000507004 PCMT1P22061 227 aa12.47□□□□□ -0.41
HMGCS1-203ENST00000507004 CHN2P52757 468 aa12.47□□□□□ -0.41
HMGCS1-203ENST00000507004 SELENOVP59797 346 aa12.47□□□□□ -0.41
HMGCS1-203ENST00000507004 CARTPTQ16568 116 aa12.47□□□□□ -0.41
HMGCS1-203ENST00000507004 PHYHD1Q5SRE7 291 aa12.47□□□□□ -0.41
HMGCS1-203ENST00000507004 GKAP1Q5VSY0 366 aaPredicted RBP12.47□□□□□ -0.41
HMGCS1-203ENST00000507004 NANOGP8Q6NSW7 305 aa12.47□□□□□ -0.41
HMGCS1-203ENST00000507004 VANGL1Q8TAA9 524 aaPredicted RBP12.47□□□□□ -0.41
HMGCS1-203ENST00000507004 MRPL24Q96A35 216 aaKnown RBP12.47□□□□□ -0.41
HMGCS1-203ENST00000507004 LRRC58Q96CX6 371 aa12.47□□□□□ -0.41
HMGCS1-203ENST00000507004 FOXN4Q96NZ1 517 aa12.47□□□□□ -0.41
HMGCS1-203ENST00000507004 LRMDAQ9H2I8 198 aa12.47□□□□□ -0.41
HMGCS1-203ENST00000507004 NANOGQ9H9S0 305 aa12.47□□□□□ -0.41
HMGCS1-203ENST00000507004 YLPM1P49750 1951 aaKnown RBP12.47□□□□□ -0.41
HMGCS1-203ENST00000507004 LOC100289279A0A1B0GTE1 492 aa12.46□□□□□ -0.41
HMGCS1-203ENST00000507004 A0A1W2PRG6 482 aa12.46□□□□□ -0.41
HMGCS1-203ENST00000507004 C11orf98E9PRG8 122 aa12.46□□□□□ -0.41
HMGCS1-203ENST00000507004 SLC22A2O15244 555 aa12.46□□□□□ -0.41
HMGCS1-203ENST00000507004 DHHO43323 396 aa12.46□□□□□ -0.41
HMGCS1-203ENST00000507004 SERPINI2O75830 405 aa12.46□□□□□ -0.41
HMGCS1-203ENST00000507004 MT-ND1P03886 318 aa12.46□□□□□ -0.41
HMGCS1-203ENST00000507004 SERPINA5P05154 406 aa12.46□□□□□ -0.41
HMGCS1-203ENST00000507004 ZNF35P13682 527 aa12.46□□□□□ -0.41
HMGCS1-203ENST00000507004 PTDSS1P48651 473 aaKnown RBP12.46□□□□□ -0.41
HMGCS1-203ENST00000507004 GZMMP51124 257 aa12.46□□□□□ -0.41
HMGCS1-203ENST00000507004 DAP3P51398 398 aaKnown RBP12.46□□□□□ -0.41
HMGCS1-203ENST00000507004 ZNF84P51523 738 aa12.46□□□□□ -0.41
HMGCS1-203ENST00000507004 ARFIP2P53365 341 aa12.46□□□□□ -0.41
HMGCS1-203ENST00000507004 TAS2R41P59536 307 aa12.46□□□□□ -0.41
HMGCS1-203ENST00000507004 SELPLGQ14242 412 aa12.46□□□□□ -0.41
HMGCS1-203ENST00000507004 SLC36A2Q495M3 483 aa12.46□□□□□ -0.41
HMGCS1-203ENST00000507004 TMEM53Q6P2H8 277 aa12.46□□□□□ -0.41
HMGCS1-203ENST00000507004 SVOPLQ8N434 492 aa12.46□□□□□ -0.41
HMGCS1-203ENST00000507004 SLC22A24Q8N4F4 322 aa12.46□□□□□ -0.41
HMGCS1-203ENST00000507004 ANKS4BQ8N8V4 417 aa12.46□□□□□ -0.41
HMGCS1-203ENST00000507004 OR1J2Q8NGS2 313 aa12.46□□□□□ -0.41
HMGCS1-203ENST00000507004 FNDC8Q8TC99 324 aa12.46□□□□□ -0.41
HMGCS1-203ENST00000507004 UBASH3BQ8TF42 649 aa12.46□□□□□ -0.41
HMGCS1-203ENST00000507004 THOC1Q96FV9 657 aaKnown RBP12.46□□□□□ -0.41
HMGCS1-203ENST00000507004 WFDC6Q9BQY6 131 aa12.46□□□□□ -0.41
HMGCS1-203ENST00000507004 TMEM120AQ9BXJ8 343 aa12.46□□□□□ -0.41
HMGCS1-203ENST00000507004 BPESC1Q9GZL8 116 aa12.46□□□□□ -0.41
HMGCS1-203ENST00000507004 SEC61A2Q9H9S3 476 aa12.46□□□□□ -0.41
HMGCS1-203ENST00000507004 TAS2R5Q9NYW4 299 aa12.46□□□□□ -0.41
HMGCS1-203ENST00000507004 ATRQ13535 2644 aa12.45□□□□□ -0.42
HMGCS1-203ENST00000507004 TMEM129A0AVI4 362 aa12.45□□□□□ -0.42
HMGCS1-203ENST00000507004 ZNF503-AS2A6NEH8 195 aa12.45□□□□□ -0.42
HMGCS1-203ENST00000507004 NPIPB13A6NJU9 1138 aa12.45□□□□□ -0.42
HMGCS1-203ENST00000507004 RNF212BA8MTL3 300 aa12.45□□□□□ -0.42
HMGCS1-203ENST00000507004 NPIPB4C9JG80 1138 aa12.45□□□□□ -0.42
HMGCS1-203ENST00000507004 MCIDASD6RGH6 385 aa12.45□□□□□ -0.42
HMGCS1-203ENST00000507004 LRRN3E7EW58 273 aa12.45□□□□□ -0.42
HMGCS1-203ENST00000507004 SEC14L2O76054 403 aa12.45□□□□□ -0.42
HMGCS1-203ENST00000507004 LY6HO94772 140 aa12.45□□□□□ -0.42
HMGCS1-203ENST00000507004 LYPD3O95274 346 aa12.45□□□□□ -0.42
HMGCS1-203ENST00000507004 TACSTD2P09758 323 aa12.45□□□□□ -0.42
HMGCS1-203ENST00000507004 ZNF16P17020 682 aaPredicted RBP12.45□□□□□ -0.42
HMGCS1-203ENST00000507004 GIPRP48546 466 aa12.45□□□□□ -0.42
HMGCS1-203ENST00000507004 MRPS11P82912 194 aaKnown RBP12.45□□□□□ -0.42
HMGCS1-203ENST00000507004 PLP2Q04941 152 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms