RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 NR0B2Q15466 257 aa15.56■□□□□ 0.08
SQSTM1-211ENST00000506690 INPP5JQ15735 1006 aaPredicted RBP15.56■□□□□ 0.08
SQSTM1-211ENST00000506690 LRRC37A5PQ49AS3 106 aa15.56■□□□□ 0.08
SQSTM1-211ENST00000506690 FHL5Q5TD97 284 aa15.56■□□□□ 0.08
SQSTM1-211ENST00000506690 MFSD9Q8NBP5 474 aa15.56■□□□□ 0.08
SQSTM1-211ENST00000506690 OR6S1Q8NH40 331 aa15.56■□□□□ 0.08
SQSTM1-211ENST00000506690 PTCHD1Q96NR3 888 aa15.56■□□□□ 0.08
SQSTM1-211ENST00000506690 SEC11CQ9BY50 192 aa15.56■□□□□ 0.08
SQSTM1-211ENST00000506690 DUSP22Q9NRW4 184 aa15.56■□□□□ 0.08
SQSTM1-211ENST00000506690 TMEM100Q9NV29 134 aa15.56■□□□□ 0.08
SQSTM1-211ENST00000506690 LHX6Q9UPM6 363 aa15.56■□□□□ 0.08
SQSTM1-211ENST00000506690 F5H0A9 414 aaPredicted RBP15.55■□□□□ 0.08
SQSTM1-211ENST00000506690 ATP1B3P54709 279 aa15.55■□□□□ 0.08
SQSTM1-211ENST00000506690 TAS2R19P59542 299 aa15.55■□□□□ 0.08
SQSTM1-211ENST00000506690 ACTBP60709 375 aa15.55■□□□□ 0.08
SQSTM1-211ENST00000506690 ACTG1P63261 375 aa15.55■□□□□ 0.08
SQSTM1-211ENST00000506690 ATPAF1Q5TC12 328 aaPredicted RBP15.55■□□□□ 0.08
SQSTM1-211ENST00000506690 LIN54Q6MZP7 749 aa15.55■□□□□ 0.08
SQSTM1-211ENST00000506690 LINC00114Q6XXX2 140 aa15.55■□□□□ 0.08
SQSTM1-211ENST00000506690 MTSS1LQ765P7 747 aa15.55■□□□□ 0.08
SQSTM1-211ENST00000506690 OR4N5Q8IXE1 308 aa15.55■□□□□ 0.08
SQSTM1-211ENST00000506690 ZNF595Q8IYB9 648 aa15.55■□□□□ 0.08
SQSTM1-211ENST00000506690 SAMD14Q8IZD0 417 aaPredicted RBP15.55■□□□□ 0.08
SQSTM1-211ENST00000506690 ZFP82Q8N141 532 aa15.55■□□□□ 0.08
SQSTM1-211ENST00000506690 COX18Q8N8Q8 333 aa15.55■□□□□ 0.08
SQSTM1-211ENST00000506690 OR2L3Q8NG85 312 aa15.55■□□□□ 0.08
SQSTM1-211ENST00000506690 ZNF417Q8TAU3 575 aa15.55■□□□□ 0.08
SQSTM1-211ENST00000506690 CRB3Q9BUF7 120 aa15.55■□□□□ 0.08
SQSTM1-211ENST00000506690 EDEM2Q9BV94 578 aa15.55■□□□□ 0.08
SQSTM1-211ENST00000506690 GSN-AS1Q9NRJ2 163 aa15.55■□□□□ 0.08
SQSTM1-211ENST00000506690 MRM2Q9UI43 246 aaKnown RBP15.55■□□□□ 0.08
SQSTM1-211ENST00000506690 FBXO4Q9UKT5 387 aa15.55■□□□□ 0.08
SQSTM1-211ENST00000506690 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.55■□□□□ 0.08
SQSTM1-211ENST00000506690 NUDT19A8MXV4 375 aa15.55■□□□□ 0.08
SQSTM1-211ENST00000506690 FADS1O60427 444 aa15.55■□□□□ 0.08
SQSTM1-211ENST00000506690 ABOP16442 354 aa15.55■□□□□ 0.08
SQSTM1-211ENST00000506690 CD34P28906 385 aa15.55■□□□□ 0.08
SQSTM1-211ENST00000506690 PTGFRP43088 359 aa15.55■□□□□ 0.08
SQSTM1-211ENST00000506690 PDZK1IP1Q13113 114 aa15.55■□□□□ 0.08
SQSTM1-211ENST00000506690 TMEM52BQ4KMG9 183 aa15.55■□□□□ 0.08
SQSTM1-211ENST00000506690 ALG10BQ5I7T1 473 aa15.55■□□□□ 0.08
SQSTM1-211ENST00000506690 FIGNL1Q6PIW4 674 aa15.55■□□□□ 0.08
SQSTM1-211ENST00000506690 DPY19L2P2Q6ZN68 376 aa15.55■□□□□ 0.08
SQSTM1-211ENST00000506690 ANKRD33Q7Z3H0 272 aa15.55■□□□□ 0.08
SQSTM1-211ENST00000506690 TMEM229BQ8NBD8 167 aa15.55■□□□□ 0.08
SQSTM1-211ENST00000506690 STOML3Q8TAV4 291 aa15.55■□□□□ 0.08
SQSTM1-211ENST00000506690 ARL11Q969Q4 196 aa15.55■□□□□ 0.08
SQSTM1-211ENST00000506690 ADAP2Q9NPF8 381 aa15.55■□□□□ 0.08
SQSTM1-211ENST00000506690 RXFP3Q9NSD7 469 aa15.55■□□□□ 0.08
SQSTM1-211ENST00000506690 TRAV20A0A0B4J274 112 aa15.54■□□□□ 0.08
SQSTM1-211ENST00000506690 ARPC3O15145 178 aa15.54■□□□□ 0.08
SQSTM1-211ENST00000506690 SGCEO43556 437 aa15.54■□□□□ 0.08
SQSTM1-211ENST00000506690 SRPX2O60687 465 aaPredicted RBP15.54■□□□□ 0.08
SQSTM1-211ENST00000506690 RAB3DO95716 219 aa15.54■□□□□ 0.08
SQSTM1-211ENST00000506690 ABHD16AO95870 558 aa15.54■□□□□ 0.08
SQSTM1-211ENST00000506690 HLA-GP17693 338 aa15.54■□□□□ 0.08
SQSTM1-211ENST00000506690 POU3F4P49335 361 aa15.54■□□□□ 0.08
SQSTM1-211ENST00000506690 CDK3Q00526 305 aa15.54■□□□□ 0.08
SQSTM1-211ENST00000506690 ATXN7L3Q14CW9 347 aaPredicted RBP15.54■□□□□ 0.08
SQSTM1-211ENST00000506690 FAM220AQ7Z4H9 259 aa15.54■□□□□ 0.08
SQSTM1-211ENST00000506690 GTPBP8Q8N3Z3 284 aaPredicted RBP15.54■□□□□ 0.08
SQSTM1-211ENST00000506690 OR5AP2Q8NGF4 316 aa15.54■□□□□ 0.08
SQSTM1-211ENST00000506690 OR4A4PQ8NGN8 299 aa15.54■□□□□ 0.08
SQSTM1-211ENST00000506690 ZNF251Q9BRH9 671 aa15.54■□□□□ 0.08
SQSTM1-211ENST00000506690 PTDSS2Q9BVG9 487 aa15.54■□□□□ 0.08
SQSTM1-211ENST00000506690 SLC22A11Q9NSA0 550 aa15.54■□□□□ 0.08
SQSTM1-211ENST00000506690 CXXC1Q9P0U4 656 aaPredicted RBP15.54■□□□□ 0.08
SQSTM1-211ENST00000506690 KLHDC2Q9Y2U9 406 aa15.54■□□□□ 0.08
SQSTM1-211ENST00000506690 TMEM200CA6NKL6 621 aa15.54■□□□□ 0.08
SQSTM1-211ENST00000506690 BRINP1O60477 761 aa15.54■□□□□ 0.08
SQSTM1-211ENST00000506690 ACAA2P42765 397 aaKnown RBP15.54■□□□□ 0.08
SQSTM1-211ENST00000506690 SNRPNP63162 240 aaKnown RBP15.54■□□□□ 0.08
SQSTM1-211ENST00000506690 PLEKHN1Q494U1 663 aaPredicted RBP15.54■□□□□ 0.08
SQSTM1-211ENST00000506690 TMEM205Q6UW68 189 aa15.54■□□□□ 0.08
SQSTM1-211ENST00000506690 ELP5Q8TE02 316 aa15.54■□□□□ 0.08
SQSTM1-211ENST00000506690 PMM1Q92871 262 aa15.54■□□□□ 0.08
SQSTM1-211ENST00000506690 TMEM106AQ96A25 262 aa15.54■□□□□ 0.08
SQSTM1-211ENST00000506690 SEC22AQ96IW7 307 aa15.54■□□□□ 0.08
SQSTM1-211ENST00000506690 ZNF558Q96NG5 402 aa15.54■□□□□ 0.08
SQSTM1-211ENST00000506690 CNTNAP3BQ96NU0 1288 aa15.54■□□□□ 0.08
SQSTM1-211ENST00000506690 STACQ99469 402 aa15.54■□□□□ 0.08
SQSTM1-211ENST00000506690 ALG12Q9BV10 488 aa15.54■□□□□ 0.08
SQSTM1-211ENST00000506690 TINAGQ9UJW2 476 aa15.54■□□□□ 0.08
SQSTM1-211ENST00000506690 CDV3Q9UKY7 258 aaKnown RBP15.54■□□□□ 0.08
SQSTM1-211ENST00000506690 PDE4DIPQ5VU43 2346 aa15.53■□□□□ 0.08
SQSTM1-211ENST00000506690 TMEM72A0PK05 275 aa15.53■□□□□ 0.08
SQSTM1-211ENST00000506690 OR4C45A6NMZ5 311 aa15.53■□□□□ 0.08
SQSTM1-211ENST00000506690 OR2AT4A6NND4 320 aa15.53■□□□□ 0.08
SQSTM1-211ENST00000506690 CCSO14618 274 aa15.53■□□□□ 0.08
SQSTM1-211ENST00000506690 S100A8P05109 93 aa15.53■□□□□ 0.08
SQSTM1-211ENST00000506690 ZNF735P0CB33 412 aa15.53■□□□□ 0.08
SQSTM1-211ENST00000506690 FOLR2P14207 255 aa15.53■□□□□ 0.08
SQSTM1-211ENST00000506690 RPL4P36578 427 aaKnown RBP15.53■□□□□ 0.08
SQSTM1-211ENST00000506690 CAPZA1P52907 286 aa15.53■□□□□ 0.08
SQSTM1-211ENST00000506690 ISXQ2M1V0 245 aa15.53■□□□□ 0.08
SQSTM1-211ENST00000506690 NDUFAF7Q7L592 441 aa15.53■□□□□ 0.08
SQSTM1-211ENST00000506690 GALNT16Q8N428 558 aa15.53■□□□□ 0.08
SQSTM1-211ENST00000506690 CDRT4Q8N9R6 151 aa15.53■□□□□ 0.08
SQSTM1-211ENST00000506690 DOK4Q8TEW6 326 aa15.53■□□□□ 0.08
SQSTM1-211ENST00000506690 RASD2Q96D21 266 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms