RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 UQCC3Q6UW78 93 aa1.6□□□□□ -2.15
GYPB-207ENST00000506679 EFL1Q7Z2Z2 1120 aaKnown RBP1.6□□□□□ -2.15
GYPB-207ENST00000506679 PPP1R42Q7Z4L9 355 aa1.6□□□□□ -2.15
GYPB-207ENST00000506679 ZNF561Q8N587 486 aa1.6□□□□□ -2.15
GYPB-207ENST00000506679 UBALD1Q8TB05 177 aa1.6□□□□□ -2.15
GYPB-207ENST00000506679 DEDD2Q8WXF8 326 aa1.6□□□□□ -2.15
GYPB-207ENST00000506679 TSSK3Q96PN8 268 aa1.6□□□□□ -2.15
GYPB-207ENST00000506679 OR8B4Q96RC9 309 aa1.6□□□□□ -2.15
GYPB-207ENST00000506679 PANX2Q96RD6 677 aa1.6□□□□□ -2.15
GYPB-207ENST00000506679 CNN2Q99439 309 aaKnown RBP1.6□□□□□ -2.15
GYPB-207ENST00000506679 NPY6RQ99463 290 aa1.6□□□□□ -2.15
GYPB-207ENST00000506679 SORT1Q99523 831 aa1.6□□□□□ -2.15
GYPB-207ENST00000506679 CRACR2AQ9BSW2 395 aa1.6□□□□□ -2.15
GYPB-207ENST00000506679 CHAC1Q9BUX1 264 aa1.6□□□□□ -2.15
GYPB-207ENST00000506679 RSPO3Q9BXY4 272 aaPredicted RBP1.6□□□□□ -2.15
GYPB-207ENST00000506679 PPA2Q9H2U2 334 aa1.6□□□□□ -2.15
GYPB-207ENST00000506679 AZI2Q9H6S1 392 aa1.6□□□□□ -2.15
GYPB-207ENST00000506679 ZNF639Q9UID6 485 aa1.6□□□□□ -2.15
GYPB-207ENST00000506679 N6AMT1Q9Y5N5 214 aa1.6□□□□□ -2.15
GYPB-207ENST00000506679 NFASCO94856 1347 aa1.6□□□□□ -2.15
GYPB-207ENST00000506679 MN1Q10571 1320 aaPredicted RBP1.6□□□□□ -2.15
GYPB-207ENST00000506679 A0A1B0GVX0 72 aa1.59□□□□□ -2.15
GYPB-207ENST00000506679 ZNF208O43345 1280 aa1.59□□□□□ -2.15
GYPB-207ENST00000506679 MGRN1O60291 552 aa1.59□□□□□ -2.15
GYPB-207ENST00000506679 GAPDHP04406 335 aaKnown RBP1.59□□□□□ -2.15
GYPB-207ENST00000506679 MRPL3P09001 348 aaKnown RBP1.59□□□□□ -2.15
GYPB-207ENST00000506679 CISD3P0C7P0 127 aa1.59□□□□□ -2.15
GYPB-207ENST00000506679 HNMTP50135 292 aa1.59□□□□□ -2.15
GYPB-207ENST00000506679 CCR8P51685 355 aa1.59□□□□□ -2.15
GYPB-207ENST00000506679 GBX2P52951 348 aaPredicted RBP1.59□□□□□ -2.15
GYPB-207ENST00000506679 ARFIP1P53367 373 aa1.59□□□□□ -2.15
GYPB-207ENST00000506679 RPS21P63220 83 aaKnown RBP1.59□□□□□ -2.15
GYPB-207ENST00000506679 SLC7A9P82251 487 aa1.59□□□□□ -2.15
GYPB-207ENST00000506679 CHIT1Q13231 466 aa1.59□□□□□ -2.15
GYPB-207ENST00000506679 PPIL2Q13356 520 aa1.59□□□□□ -2.15
GYPB-207ENST00000506679 SHHQ15465 462 aa1.59□□□□□ -2.15
GYPB-207ENST00000506679 VAX1Q5SQQ9 334 aa1.59□□□□□ -2.15
GYPB-207ENST00000506679 CNIH2Q6PI25 160 aa1.59□□□□□ -2.15
GYPB-207ENST00000506679 C19orf35Q6ZS72 473 aa1.59□□□□□ -2.15
GYPB-207ENST00000506679 FAM92BQ6ZTR7 304 aa1.59□□□□□ -2.15
GYPB-207ENST00000506679 LINC00173Q6ZV60 143 aa1.59□□□□□ -2.15
GYPB-207ENST00000506679 H2BFWTQ7Z2G1 175 aa1.59□□□□□ -2.15
GYPB-207ENST00000506679 ABHD12BQ7Z5M8 362 aaPredicted RBP1.59□□□□□ -2.15
GYPB-207ENST00000506679 ZNF679Q8IYX0 411 aa1.59□□□□□ -2.15
GYPB-207ENST00000506679 OR10G4Q8NGN3 311 aa1.59□□□□□ -2.15
GYPB-207ENST00000506679 SGK3Q96BR1 496 aa1.59□□□□□ -2.15
GYPB-207ENST00000506679 C12orf42Q96LP6 360 aa1.59□□□□□ -2.15
GYPB-207ENST00000506679 SPIN2AQ99865 258 aa1.59□□□□□ -2.15
GYPB-207ENST00000506679 SH3GL1Q99961 368 aa1.59□□□□□ -2.15
GYPB-207ENST00000506679 SPIN2BQ9BPZ2 258 aa1.59□□□□□ -2.15
GYPB-207ENST00000506679 KCTD14Q9BQ13 255 aaPredicted RBP1.59□□□□□ -2.15
GYPB-207ENST00000506679 MFFQ9GZY8 342 aa1.59□□□□□ -2.15
GYPB-207ENST00000506679 ZNF430Q9H8G1 570 aaPredicted RBP1.59□□□□□ -2.15
GYPB-207ENST00000506679 NOX3Q9HBY0 568 aa1.59□□□□□ -2.15
GYPB-207ENST00000506679 INPP5EQ9NRR6 644 aa1.59□□□□□ -2.15
GYPB-207ENST00000506679 PIGLQ9Y2B2 252 aa1.59□□□□□ -2.15
GYPB-207ENST00000506679 YTHDF2Q9Y5A9 579 aaKnown RBP1.59□□□□□ -2.15
GYPB-207ENST00000506679 PEX16Q9Y5Y5 336 aa1.59□□□□□ -2.15
GYPB-207ENST00000506679 MROH7-TTC4A0A0A0MT08 1334 aa1.59□□□□□ -2.16
GYPB-207ENST00000506679 IGKV6-21A0A0C4DH24 114 aa1.58□□□□□ -2.16
GYPB-207ENST00000506679 IGHV5-51A0A0C4DH38 117 aa1.58□□□□□ -2.16
GYPB-207ENST00000506679 A0A1W2PQ67 120 aa1.58□□□□□ -2.16
GYPB-207ENST00000506679 TMEM150BA6NC51 233 aa1.58□□□□□ -2.16
GYPB-207ENST00000506679 HAS3O00219 553 aa1.58□□□□□ -2.16
GYPB-207ENST00000506679 CCL21O00585 134 aa1.58□□□□□ -2.16
GYPB-207ENST00000506679 MTX2O75431 263 aa1.58□□□□□ -2.16
GYPB-207ENST00000506679 C6orf47O95873 294 aa1.58□□□□□ -2.16
GYPB-207ENST00000506679 C2P06681 752 aa1.58□□□□□ -2.16
GYPB-207ENST00000506679 UBTFL1P0CB47 393 aaPredicted RBP1.58□□□□□ -2.16
GYPB-207ENST00000506679 RDXP35241 583 aaKnown RBP1.58□□□□□ -2.16
GYPB-207ENST00000506679 PRPHP41219 470 aa1.58□□□□□ -2.16
GYPB-207ENST00000506679 CEBPDP49716 269 aaPredicted RBP1.58□□□□□ -2.16
GYPB-207ENST00000506679 AIF1P55008 147 aa1.58□□□□□ -2.16
GYPB-207ENST00000506679 FBXW4P57775 412 aa1.58□□□□□ -2.16
GYPB-207ENST00000506679 SEC61GP60059 68 aa1.58□□□□□ -2.16
GYPB-207ENST00000506679 MRPL28Q13084 256 aaKnown RBP1.58□□□□□ -2.16
GYPB-207ENST00000506679 ARHGAP19Q14CB8 494 aa1.58□□□□□ -2.16
GYPB-207ENST00000506679 PON3Q15166 354 aa1.58□□□□□ -2.16
GYPB-207ENST00000506679 ZBED5Q49AG3 693 aa1.58□□□□□ -2.16
GYPB-207ENST00000506679 ABCA11PQ4W5N1 156 aa1.58□□□□□ -2.16
GYPB-207ENST00000506679 LY6G6FQ5SQ64 297 aa1.58□□□□□ -2.16
GYPB-207ENST00000506679 OR2A2Q6IF42 318 aa1.58□□□□□ -2.16
GYPB-207ENST00000506679 LRRC31Q6UY01 552 aa1.58□□□□□ -2.16
GYPB-207ENST00000506679 LHFPL3Q86UP9 236 aa1.58□□□□□ -2.16
GYPB-207ENST00000506679 PSTKQ8IV42 348 aaKnown RBP1.58□□□□□ -2.16
GYPB-207ENST00000506679 PUSL1Q8N0Z8 303 aaKnown RBP1.58□□□□□ -2.16
GYPB-207ENST00000506679 OR1L4Q8NGR5 311 aa1.58□□□□□ -2.16
GYPB-207ENST00000506679 OR2L8Q8NGY9 312 aa1.58□□□□□ -2.16
GYPB-207ENST00000506679 FRZBQ92765 325 aa1.58□□□□□ -2.16
GYPB-207ENST00000506679 PLEKHA8Q96JA3 519 aa1.58□□□□□ -2.16
GYPB-207ENST00000506679 BMFQ96LC9 184 aa1.58□□□□□ -2.16
GYPB-207ENST00000506679 OR2A5Q96R48 311 aa1.58□□□□□ -2.16
GYPB-207ENST00000506679 SH3GL3Q99963 347 aa1.58□□□□□ -2.16
GYPB-207ENST00000506679 RTBDNQ9BSG5 229 aaPredicted RBP1.58□□□□□ -2.16
GYPB-207ENST00000506679 OSBPL10Q9BXB5 764 aa1.58□□□□□ -2.16
GYPB-207ENST00000506679 GABARAPL3Q9BY60 117 aa1.58□□□□□ -2.16
GYPB-207ENST00000506679 MRPL37Q9BZE1 423 aaKnown RBP1.58□□□□□ -2.16
GYPB-207ENST00000506679 VCX2Q9H322 139 aa1.58□□□□□ -2.16
GYPB-207ENST00000506679 OR12D3Q9UGF7 316 aa1.58□□□□□ -2.16
GYPB-207ENST00000506679 CD84Q9UIB8 345 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms