RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 CYB561A3Q8NBI2 242 aa18.08■□□□□ 0.49
CDC42SE2-206ENST00000503291 SLC37A3Q8NCC5 494 aa18.08■□□□□ 0.49
CDC42SE2-206ENST00000503291 GALNT11Q8NCW6 608 aa18.08■□□□□ 0.49
CDC42SE2-206ENST00000503291 TRUB1Q8WWH5 349 aaKnown RBP18.08■□□□□ 0.49
CDC42SE2-206ENST00000503291 ZNF566Q969W8 418 aa18.08■□□□□ 0.49
CDC42SE2-206ENST00000503291 DDOQ99489 341 aa18.08■□□□□ 0.49
CDC42SE2-206ENST00000503291 ZNF226Q9NYT6 803 aa18.08■□□□□ 0.49
CDC42SE2-206ENST00000503291 PHF3Q92576 2039 aaKnown RBP18.08■□□□□ 0.48
CDC42SE2-206ENST00000503291 PRSS37A4D1T9 235 aa18.08■□□□□ 0.48
CDC42SE2-206ENST00000503291 E9PLN8 166 aa18.08■□□□□ 0.48
CDC42SE2-206ENST00000503291 H7C1C5 153 aa18.08■□□□□ 0.48
CDC42SE2-206ENST00000503291 ZNF3P17036 446 aa18.08■□□□□ 0.48
CDC42SE2-206ENST00000503291 CEACAM8P31997 349 aaPredicted RBP18.08■□□□□ 0.48
CDC42SE2-206ENST00000503291 LCN6P62502 163 aa18.08■□□□□ 0.48
CDC42SE2-206ENST00000503291 LEG1Q6P5S2 330 aa18.08■□□□□ 0.48
CDC42SE2-206ENST00000503291 ENTHD1Q8IYW4 607 aa18.08■□□□□ 0.48
CDC42SE2-206ENST00000503291 TMEM123Q8N131 208 aa18.08■□□□□ 0.48
CDC42SE2-206ENST00000503291 NAXEQ8NCW5 288 aa18.08■□□□□ 0.48
CDC42SE2-206ENST00000503291 OR8J1Q8NGP2 316 aa18.08■□□□□ 0.48
CDC42SE2-206ENST00000503291 KCNK17Q96T54 332 aa18.08■□□□□ 0.48
CDC42SE2-206ENST00000503291 VKORC1Q9BQB6 163 aa18.08■□□□□ 0.48
CDC42SE2-206ENST00000503291 RASSF1Q9NS23 344 aa18.08■□□□□ 0.48
CDC42SE2-206ENST00000503291 CHD6Q8TD26 2715 aa18.08■□□□□ 0.48
CDC42SE2-206ENST00000503291 OR6C68A6NDL8 312 aa18.07■□□□□ 0.48
CDC42SE2-206ENST00000503291 FAM183AA6NL82 134 aa18.07■□□□□ 0.48
CDC42SE2-206ENST00000503291 EIF4E1BA6NMX2 242 aaKnown RBP18.07■□□□□ 0.48
CDC42SE2-206ENST00000503291 IGHG1P01857 330 aa18.07■□□□□ 0.48
CDC42SE2-206ENST00000503291 PGA4P0DJD7 388 aa18.07■□□□□ 0.48
CDC42SE2-206ENST00000503291 PGA3P0DJD8 388 aa18.07■□□□□ 0.48
CDC42SE2-206ENST00000503291 TMIGD3P0DMS9 266 aaPredicted RBP18.07■□□□□ 0.48
CDC42SE2-206ENST00000503291 KIR2DL2P43627 348 aaPredicted RBP18.07■□□□□ 0.48
CDC42SE2-206ENST00000503291 SIRPAP78324 504 aa18.07■□□□□ 0.48
CDC42SE2-206ENST00000503291 ITGADQ13349 1161 aa18.07■□□□□ 0.48
CDC42SE2-206ENST00000503291 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.07■□□□□ 0.48
CDC42SE2-206ENST00000503291 CNEP1R1Q8N9A8 125 aa18.07■□□□□ 0.48
CDC42SE2-206ENST00000503291 SETD9Q8NE22 299 aa18.07■□□□□ 0.48
CDC42SE2-206ENST00000503291 ZFP3Q96NJ6 502 aa18.07■□□□□ 0.48
CDC42SE2-206ENST00000503291 ANKRD60Q9BZ19 345 aa18.07■□□□□ 0.48
CDC42SE2-206ENST00000503291 AASSQ9UDR5 926 aa18.07■□□□□ 0.48
CDC42SE2-206ENST00000503291 RNF6Q9Y252 685 aa18.07■□□□□ 0.48
CDC42SE2-206ENST00000503291 MEMO1Q9Y316 297 aa18.07■□□□□ 0.48
CDC42SE2-206ENST00000503291 EMC9Q9Y3B6 208 aa18.07■□□□□ 0.48
CDC42SE2-206ENST00000503291 LRRC42Q9Y546 428 aa18.07■□□□□ 0.48
CDC42SE2-206ENST00000503291 EDNRAP25101 427 aa18.06■□□□□ 0.48
CDC42SE2-206ENST00000503291 CLRN1P58418 232 aa18.06■□□□□ 0.48
CDC42SE2-206ENST00000503291 ISL1P61371 349 aa18.06■□□□□ 0.48
CDC42SE2-206ENST00000503291 IL5RAQ01344 420 aa18.06■□□□□ 0.48
CDC42SE2-206ENST00000503291 DBPQ10586 325 aaPredicted RBP18.06■□□□□ 0.48
CDC42SE2-206ENST00000503291 EIF2S3LQ2VIR3 472 aaKnown RBP18.06■□□□□ 0.48
CDC42SE2-206ENST00000503291 NCCRP1Q6ZVX7 275 aaPredicted RBP18.06■□□□□ 0.48
CDC42SE2-206ENST00000503291 C8orf59Q8N0T1 100 aaPredicted RBP18.06■□□□□ 0.48
CDC42SE2-206ENST00000503291 TMEM163Q8TC26 289 aa18.06■□□□□ 0.48
CDC42SE2-206ENST00000503291 PTP4A1Q93096 173 aa18.06■□□□□ 0.48
CDC42SE2-206ENST00000503291 OTULINQ96BN8 352 aa18.06■□□□□ 0.48
CDC42SE2-206ENST00000503291 DMRTA2Q96SC8 542 aa18.06■□□□□ 0.48
CDC42SE2-206ENST00000503291 SYT4Q9H2B2 425 aa18.06■□□□□ 0.48
CDC42SE2-206ENST00000503291 C12orf49Q9H741 205 aa18.06■□□□□ 0.48
CDC42SE2-206ENST00000503291 RALYQ9UKM9 306 aaKnown RBP18.06■□□□□ 0.48
CDC42SE2-206ENST00000503291 SLC22A23A1A5C7 686 aa18.06■□□□□ 0.48
CDC42SE2-206ENST00000503291 SLC43A1O75387 559 aa18.06■□□□□ 0.48
CDC42SE2-206ENST00000503291 CRHP06850 196 aa18.06■□□□□ 0.48
CDC42SE2-206ENST00000503291 CD47Q08722 323 aa18.06■□□□□ 0.48
CDC42SE2-206ENST00000503291 PLBD1Q6P4A8 553 aa18.06■□□□□ 0.48
CDC42SE2-206ENST00000503291 CPOQ8IVL8 374 aa18.06■□□□□ 0.48
CDC42SE2-206ENST00000503291 RHOXF1Q8NHV9 184 aa18.06■□□□□ 0.48
CDC42SE2-206ENST00000503291 Q9H521 79 aa18.06■□□□□ 0.48
CDC42SE2-206ENST00000503291 HINT3Q9NQE9 182 aaKnown RBP18.06■□□□□ 0.48
CDC42SE2-206ENST00000503291 VSX1Q9NZR4 365 aaPredicted RBP18.06■□□□□ 0.48
CDC42SE2-206ENST00000503291 CCL21O00585 134 aa18.05■□□□□ 0.48
CDC42SE2-206ENST00000503291 TNFSF13O75888 250 aa18.05■□□□□ 0.48
CDC42SE2-206ENST00000503291 RENP00797 406 aa18.05■□□□□ 0.48
CDC42SE2-206ENST00000503291 HIST3H3Q16695 136 aa18.05■□□□□ 0.48
CDC42SE2-206ENST00000503291 RIPPLY2Q5TAB7 128 aa18.05■□□□□ 0.48
CDC42SE2-206ENST00000503291 TMEM211Q6ICI0 200 aa18.05■□□□□ 0.48
CDC42SE2-206ENST00000503291 ZNF100Q8IYN0 542 aa18.05■□□□□ 0.48
CDC42SE2-206ENST00000503291 NOXO1Q8NFA2 376 aa18.05■□□□□ 0.48
CDC42SE2-206ENST00000503291 OR6N1Q8NGY5 312 aa18.05■□□□□ 0.48
CDC42SE2-206ENST00000503291 APH1AQ96BI3 265 aa18.05■□□□□ 0.48
CDC42SE2-206ENST00000503291 CNBD2Q96M20 576 aa18.05■□□□□ 0.48
CDC42SE2-206ENST00000503291 SNX18Q96RF0 628 aa18.05■□□□□ 0.48
CDC42SE2-206ENST00000503291 HCAR1Q9BXC0 346 aa18.05■□□□□ 0.48
CDC42SE2-206ENST00000503291 FN3KQ9H479 309 aa18.05■□□□□ 0.48
CDC42SE2-206ENST00000503291 MED20Q9H944 212 aa18.05■□□□□ 0.48
CDC42SE2-206ENST00000503291 RPRD1BQ9NQG5 326 aaKnown RBP18.05■□□□□ 0.48
CDC42SE2-206ENST00000503291 FOXD3Q9UJU5 478 aaPredicted RBP18.05■□□□□ 0.48
CDC42SE2-206ENST00000503291 HSPE1-MOB4S4R3N1 261 aa18.05■□□□□ 0.48
CDC42SE2-206ENST00000503291 CENPBD1B2RD01 187 aa18.05■□□□□ 0.48
CDC42SE2-206ENST00000503291 PRR23D1E9PI22 279 aaPredicted RBP18.05■□□□□ 0.48
CDC42SE2-206ENST00000503291 DENRO43583 198 aaKnown RBP18.05■□□□□ 0.48
CDC42SE2-206ENST00000503291 AHCYL1O43865 530 aa18.05■□□□□ 0.48
CDC42SE2-206ENST00000503291 MPZL2O60487 215 aa18.05■□□□□ 0.48
CDC42SE2-206ENST00000503291 PRR23D2P0DMB1 279 aaPredicted RBP18.05■□□□□ 0.48
CDC42SE2-206ENST00000503291 GABRB1P18505 474 aa18.05■□□□□ 0.48
CDC42SE2-206ENST00000503291 GNLYP22749 145 aa18.05■□□□□ 0.48
CDC42SE2-206ENST00000503291 MYF6P23409 242 aa18.05■□□□□ 0.48
CDC42SE2-206ENST00000503291 UQCRFS1P47985 274 aa18.05■□□□□ 0.48
CDC42SE2-206ENST00000503291 CSNK1A1P48729 337 aa18.05■□□□□ 0.48
CDC42SE2-206ENST00000503291 SNRPGP62308 76 aaKnown RBP18.05■□□□□ 0.48
CDC42SE2-206ENST00000503291 LGALS3BPQ08380 585 aa18.05■□□□□ 0.48
CDC42SE2-206ENST00000503291 VWA1Q6PCB0 445 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms