RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 RBBP4Q09028 425 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 NPRL3Q12980 569 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 OR1Q1Q15612 314 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 CARTPTQ16568 116 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 MSMPQ1L6U9 139 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 RPS26P11Q5JNZ5 115 aaPredicted RBP5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 C6orf10Q5SRN2 563 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 CEP85LQ5SZL2 805 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 HHATQ5VTY9 493 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 KRT80Q6KB66 452 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 EPGNQ6UW88 154 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 UNQ6126/PRO20091Q6UXV3 157 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 C12orf54Q6X4T0 127 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 IL17RELQ6ZVW7 336 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 TUBA1AQ71U36 451 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 HDDC2Q7Z4H3 204 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 RANBP3LQ86VV4 465 aaPredicted RBP5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 ZNF584Q8IVC4 421 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 SLC30A8Q8IWU4 369 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 ZCCHC24Q8N2G6 241 aaKnown RBP5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 SLC22A24Q8N4F4 322 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 OR1J2Q8NGS2 313 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 OR5J2Q8NH18 312 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 ZNF519Q8TB69 540 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 MGARPQ8TDB4 240 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 RASSF5Q8WWW0 418 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 LIPHQ8WWY8 451 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 MAL2Q969L2 176 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 RAB39BQ96DA2 213 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 TRIM44Q96DX7 344 aaPredicted RBP5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 SLC25A44Q96H78 314 aaPredicted RBP5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 MPP4Q96JB8 637 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 C7orf26Q96N11 449 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 ULBP2Q9BZM5 246 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 BCL2L14Q9BZR8 327 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 SMURF2Q9HAU4 748 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 KCNK9Q9NPC2 374 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 SLCO1B3Q9NPD5 702 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 G6PC2Q9NQR9 355 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 TUBG2Q9NRH3 451 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 ZNF275Q9NSD4 429 aaPredicted RBP5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 HIF1ANQ9NWT6 349 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 SLC25A37Q9NYZ2 338 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 GLTPQ9NZD2 209 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 SELENONQ9NZV5 590 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 STX18Q9P2W9 335 aaKnown RBP5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 SEC14L4Q9UDX3 406 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 ZNF229Q9UJW7 825 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 PCDHB10Q9UN67 800 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 POFUT2Q9Y2G5 429 aa5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 POLR3KQ9Y2Y1 108 aaPredicted RBP5.23□□□□□ -1.57
LSM3P4-201ENST00000502948 A0A0G2JMP0 313 aa5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 A0A0X1KG70 313 aa5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 TPST1O60507 370 aa5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 TPST2O60704 377 aa5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 DEAF1O75398 565 aaPredicted RBP5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 VENTXO95231 258 aa5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 FSHBP01225 129 aa5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 HLA-HP01893 362 aa5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 MT-ND5P03915 603 aa5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 ASAH2BP0C7U1 165 aa5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 PGA4P0DJD7 388 aa5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 PGA3P0DJD8 388 aa5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 NR2C1P13056 603 aa5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 HLA-DOBP13765 273 aa5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 B4GALT1P15291 398 aa5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 ADRA2CP18825 462 aa5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 SLC6A2P23975 617 aa5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 CAPZA2P47755 286 aa5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 PTDSS1P48651 473 aaKnown RBP5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 CSNK1A1P48729 337 aa5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 ATP4BP51164 291 aa5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 CDH12P55289 794 aa5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 KLF3P57682 345 aaPredicted RBP5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 RGS8P57771 180 aaPredicted RBP5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 PMS2P3Q13401 168 aa5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 ZNF74Q16587 644 aa5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 SLC36A2Q495M3 483 aa5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 GTDC1Q4AE62 458 aa5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 C10orf128Q5T292 105 aa5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 GCNT6Q5T4J0 391 aa5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 GKAP1Q5VSY0 366 aaPredicted RBP5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 RGS7BPQ6MZT1 257 aaPredicted RBP5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 ACSM5Q6NUN0 579 aa5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 MAVSQ7Z434 540 aa5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 C1QL2Q7Z5L3 287 aa5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 FUNDC1Q8IVP5 155 aa5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 SKA3Q8IX90 412 aa5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 MSRB3Q8IXL7 192 aa5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 SYT14Q8NB59 555 aa5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 HIPK4Q8NE63 616 aa5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 OR4M2Q8NGB6 313 aa5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 OR9I1Q8NGQ6 314 aa5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 OR6N1Q8NGY5 312 aa5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 FNDC8Q8TC99 324 aa5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 TSPEARQ8WU66 669 aa5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 YIPF5Q969M3 257 aa5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 ZNF566Q969W8 418 aa5.22□□□□□ -1.57
LSM3P4-201ENST00000502948 MOGAT1Q96PD6 335 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms