RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 GRIA1P42261 906 aa1.68□□□□□ -2.14
SMC4-227ENST00000497984 NAMPTP43490 491 aa1.68□□□□□ -2.14
SMC4-227ENST00000497984 YAP1P46937 504 aaKnown RBP1.68□□□□□ -2.14
SMC4-227ENST00000497984 NCBP2P52298 156 aaKnown RBP eCLIP1.68□□□□□ -2.146e-34■■■■■ 154.9
SMC4-227ENST00000497984 ESRRGP62508 458 aa1.68□□□□□ -2.14
SMC4-227ENST00000497984 ERCC8Q13216 396 aa1.68□□□□□ -2.14
SMC4-227ENST00000497984 NADK2Q4G0N4 442 aa1.68□□□□□ -2.14
SMC4-227ENST00000497984 DUX4L9Q6RFH8 374 aaPredicted RBP1.68□□□□□ -2.14
SMC4-227ENST00000497984 STRADAQ7RTN6 431 aa1.68□□□□□ -2.14
SMC4-227ENST00000497984 WDR86Q86TI4 376 aa1.68□□□□□ -2.14
SMC4-227ENST00000497984 TMEM123Q8N131 208 aa1.68□□□□□ -2.14
SMC4-227ENST00000497984 STPG2Q8N412 459 aa1.68□□□□□ -2.14
SMC4-227ENST00000497984 MREGQ8N565 214 aa1.68□□□□□ -2.14
SMC4-227ENST00000497984 MFSD9Q8NBP5 474 aa1.68□□□□□ -2.14
SMC4-227ENST00000497984 ESR2Q92731 530 aa1.68□□□□□ -2.14
SMC4-227ENST00000497984 RNF157Q96PX1 679 aa1.68□□□□□ -2.14
SMC4-227ENST00000497984 SH3GL3Q99963 347 aa1.68□□□□□ -2.14
SMC4-227ENST00000497984 KCTD14Q9BQ13 255 aaPredicted RBP1.68□□□□□ -2.14
SMC4-227ENST00000497984 GABARAPL3Q9BY60 117 aa1.68□□□□□ -2.14
SMC4-227ENST00000497984 PARP12Q9H0J9 701 aaKnown RBP1.68□□□□□ -2.14
SMC4-227ENST00000497984 NIPAL2Q9H841 368 aa1.68□□□□□ -2.14
SMC4-227ENST00000497984 SLC35D1Q9NTN3 355 aa1.68□□□□□ -2.14
SMC4-227ENST00000497984 HPF1Q9NWY4 346 aa1.68□□□□□ -2.14
SMC4-227ENST00000497984 KCNIP3Q9Y2W7 256 aa1.68□□□□□ -2.14
SMC4-227ENST00000497984 CENPJQ9HC77 1338 aaPredicted RBP1.67□□□□□ -2.14
SMC4-227ENST00000497984 IGLV3-12A0A075B6K2 115 aa1.67□□□□□ -2.14
SMC4-227ENST00000497984 IGHV3-74A0A0B4J1X5 117 aa1.67□□□□□ -2.14
SMC4-227ENST00000497984 A0A0B4J2A0 478 aa1.67□□□□□ -2.14
SMC4-227ENST00000497984 A0A1B0GVI7 797 aa1.67□□□□□ -2.14
SMC4-227ENST00000497984 RPL36A-HNRNPH2H7BZ11 118 aa1.67□□□□□ -2.14
SMC4-227ENST00000497984 RBFOX2O43251 390 aaKnown RBP eCLIP1.67□□□□□ -2.143e-8■■■■■ 54.1
SMC4-227ENST00000497984 SLC25A14O95258 325 aaPredicted RBP1.67□□□□□ -2.14
SMC4-227ENST00000497984 IFNB1P01574 187 aa1.67□□□□□ -2.14
SMC4-227ENST00000497984 FOLR1P15328 257 aa1.67□□□□□ -2.14
SMC4-227ENST00000497984 UGT2B15P54855 530 aa1.67□□□□□ -2.14
SMC4-227ENST00000497984 BPIFB3P59826 476 aa1.67□□□□□ -2.14
SMC4-227ENST00000497984 RAP1AP62834 184 aa1.67□□□□□ -2.14
SMC4-227ENST00000497984 CACNG7P62955 275 aa1.67□□□□□ -2.14
SMC4-227ENST00000497984 RPS21P63220 83 aaKnown RBP1.67□□□□□ -2.14
SMC4-227ENST00000497984 SYCNQ0VAF6 134 aa1.67□□□□□ -2.14
SMC4-227ENST00000497984 SCRN3Q0VDG4 424 aa1.67□□□□□ -2.14
SMC4-227ENST00000497984 PLD1Q13393 1074 aa1.67□□□□□ -2.14
SMC4-227ENST00000497984 DMRTC1Q5HYR2 192 aa1.67□□□□□ -2.14
SMC4-227ENST00000497984 HES5Q5TA89 166 aa1.67□□□□□ -2.14
SMC4-227ENST00000497984 ABHD13Q7L211 337 aa1.67□□□□□ -2.14
SMC4-227ENST00000497984 TMEM135Q86UB9 458 aa1.67□□□□□ -2.14
SMC4-227ENST00000497984 TRIM69Q86WT6 500 aa1.67□□□□□ -2.14
SMC4-227ENST00000497984 CALHM3Q86XJ0 350 aa1.67□□□□□ -2.14
SMC4-227ENST00000497984 OR52P1PQ8NH57 321 aa1.67□□□□□ -2.14
SMC4-227ENST00000497984 LKAAEAR1Q8TD35 194 aa1.67□□□□□ -2.14
SMC4-227ENST00000497984 MAGEE2Q8TD90 523 aaPredicted RBP1.67□□□□□ -2.14
SMC4-227ENST00000497984 FAIM2Q9BWQ8 316 aa1.67□□□□□ -2.14
SMC4-227ENST00000497984 UGT1A7Q9HAW7 530 aa1.67□□□□□ -2.14
SMC4-227ENST00000497984 UGT1A10Q9HAW8 530 aa1.67□□□□□ -2.14
SMC4-227ENST00000497984 UGT1A8Q9HAW9 530 aa1.67□□□□□ -2.14
SMC4-227ENST00000497984 RAB18Q9NP72 206 aa1.67□□□□□ -2.14
SMC4-227ENST00000497984 ISYNA1Q9NPH2 558 aa1.67□□□□□ -2.14
SMC4-227ENST00000497984 SHPKQ9UHJ6 478 aa1.67□□□□□ -2.14
SMC4-227ENST00000497984 MRPS7Q9Y2R9 242 aaKnown RBP1.67□□□□□ -2.14
SMC4-227ENST00000497984 DDX49Q9Y6V7 483 aaKnown RBP1.67□□□□□ -2.14
SMC4-227ENST00000497984 CEMIPQ8WUJ3 1361 aa1.67□□□□□ -2.14
SMC4-227ENST00000497984 IGLV1-50A0A075B6I6 118 aa1.66□□□□□ -2.14
SMC4-227ENST00000497984 IGLV3-22A0A075B6J6 115 aa1.66□□□□□ -2.14
SMC4-227ENST00000497984 TRAV39A0A0B4J263 110 aa1.66□□□□□ -2.14
SMC4-227ENST00000497984 METTL21EPA6NDL7 271 aa1.66□□□□□ -2.14
SMC4-227ENST00000497984 UGT2B4P06133 528 aa1.66□□□□□ -2.14
SMC4-227ENST00000497984 CAPN1P07384 714 aa1.66□□□□□ -2.14
SMC4-227ENST00000497984 ADRA2AP08913 450 aa1.66□□□□□ -2.14
SMC4-227ENST00000497984 IQCF3P0C7M6 154 aa1.66□□□□□ -2.14
SMC4-227ENST00000497984 LINC00869P0C866 280 aa1.66□□□□□ -2.14
SMC4-227ENST00000497984 RPA2P15927 270 aa1.66□□□□□ -2.14
SMC4-227ENST00000497984 TCN2P20062 427 aa1.66□□□□□ -2.14
SMC4-227ENST00000497984 RORAP35398 523 aa1.66□□□□□ -2.14
SMC4-227ENST00000497984 CD86P42081 329 aa1.66□□□□□ -2.14
SMC4-227ENST00000497984 LOXL1Q08397 574 aaPredicted RBP1.66□□□□□ -2.14
SMC4-227ENST00000497984 PRPSAP1Q14558 356 aa1.66□□□□□ -2.14
SMC4-227ENST00000497984 ARHGAP19Q14CB8 494 aa1.66□□□□□ -2.14
SMC4-227ENST00000497984 IGFBP7Q16270 282 aa1.66□□□□□ -2.14
SMC4-227ENST00000497984 VAX1Q5SQQ9 334 aa1.66□□□□□ -2.14
SMC4-227ENST00000497984 OR4F3Q6IEY1 312 aa1.66□□□□□ -2.14
SMC4-227ENST00000497984 CNIH2Q6PI25 160 aa1.66□□□□□ -2.14
SMC4-227ENST00000497984 NTM-AS1Q6ZSK4 140 aa1.66□□□□□ -2.14
SMC4-227ENST00000497984 LINC00173Q6ZV60 143 aa1.66□□□□□ -2.14
SMC4-227ENST00000497984 TMEM179Q6ZVK1 233 aa1.66□□□□□ -2.14
SMC4-227ENST00000497984 ZNF557Q8N988 423 aaPredicted RBP1.66□□□□□ -2.14
SMC4-227ENST00000497984 GATSQ8NAP1 163 aa1.66□□□□□ -2.14
SMC4-227ENST00000497984 NOXO1Q8NFA2 376 aa1.66□□□□□ -2.14
SMC4-227ENST00000497984 OR4S2Q8NH73 311 aa1.66□□□□□ -2.14
SMC4-227ENST00000497984 SDR42E1Q8WUS8 393 aa1.66□□□□□ -2.14
SMC4-227ENST00000497984 SGK3Q96BR1 496 aa1.66□□□□□ -2.14
SMC4-227ENST00000497984 COQ2Q96H96 371 aa1.66□□□□□ -2.14
SMC4-227ENST00000497984 RBM14Q96PK6 669 aaKnown RBP1.66□□□□□ -2.14
SMC4-227ENST00000497984 SLC38A2Q96QD8 506 aa1.66□□□□□ -2.14
SMC4-227ENST00000497984 SECISBP2Q96T21 854 aaKnown RBP1.66□□□□□ -2.14
SMC4-227ENST00000497984 MRPL37Q9BZE1 423 aaKnown RBP1.66□□□□□ -2.14
SMC4-227ENST00000497984 ADAP2Q9NPF8 381 aa1.66□□□□□ -2.14
SMC4-227ENST00000497984 CABIN1Q9Y6J0 2220 aa1.66□□□□□ -2.14
SMC4-227ENST00000497984 IGKV1D-13A0A0B4J2D9 117 aa1.65□□□□□ -2.15
SMC4-227ENST00000497984 TMEM223A0PJW6 202 aa1.65□□□□□ -2.15
SMC4-227ENST00000497984 C17orf51A8MQB3 221 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms