RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 IGHG1P01857 330 aa10.5□□□□□ -0.73
CUX1-210ENST00000497815 PGA4P0DJD7 388 aa10.5□□□□□ -0.73
CUX1-210ENST00000497815 PGA3P0DJD8 388 aa10.5□□□□□ -0.73
CUX1-210ENST00000497815 CDH2P19022 906 aaPredicted RBP10.5□□□□□ -0.73
CUX1-210ENST00000497815 PEX2P28328 305 aa10.5□□□□□ -0.73
CUX1-210ENST00000497815 GRNP28799 593 aaKnown RBP10.5□□□□□ -0.73
CUX1-210ENST00000497815 SDHAP31040 664 aa10.5□□□□□ -0.73
CUX1-210ENST00000497815 FOXG1P55316 489 aaPredicted RBP10.5□□□□□ -0.73
CUX1-210ENST00000497815 RAP1BP61224 184 aa10.5□□□□□ -0.73
CUX1-210ENST00000497815 RAP1AP62834 184 aa10.5□□□□□ -0.73
CUX1-210ENST00000497815 MYBPC1Q00872 1141 aa10.5□□□□□ -0.73
CUX1-210ENST00000497815 ROR2Q01974 943 aaKnown RBP10.5□□□□□ -0.73
CUX1-210ENST00000497815 FMODQ06828 376 aa10.5□□□□□ -0.73
CUX1-210ENST00000497815 CD47Q08722 323 aa10.5□□□□□ -0.73
CUX1-210ENST00000497815 FAM27E3Q08E93 113 aa10.5□□□□□ -0.73
CUX1-210ENST00000497815 MESTQ5EB52 335 aa10.5□□□□□ -0.73
CUX1-210ENST00000497815 TMEM236Q5W0B7 351 aa10.5□□□□□ -0.73
CUX1-210ENST00000497815 GPR139Q6DWJ6 353 aa10.5□□□□□ -0.73
CUX1-210ENST00000497815 ZBTB49Q6ZSB9 765 aa10.5□□□□□ -0.73
CUX1-210ENST00000497815 Q6ZT83 130 aa10.5□□□□□ -0.73
CUX1-210ENST00000497815 BEND4Q6ZU67 534 aa10.5□□□□□ -0.73
CUX1-210ENST00000497815 LINGO2Q7L985 606 aa10.5□□□□□ -0.73
CUX1-210ENST00000497815 FAM122BQ7Z309 247 aa10.5□□□□□ -0.73
CUX1-210ENST00000497815 HDDC2Q7Z4H3 204 aa10.5□□□□□ -0.73
CUX1-210ENST00000497815 CXorf67Q86X51 503 aaPredicted RBP10.5□□□□□ -0.73
CUX1-210ENST00000497815 MED12LQ86YW9 2145 aa10.5□□□□□ -0.73
CUX1-210ENST00000497815 C20orf196Q8IYI0 205 aa10.5□□□□□ -0.73
CUX1-210ENST00000497815 GALNT4Q8N4A0 578 aa10.5□□□□□ -0.73
CUX1-210ENST00000497815 ARIH2OSQ8N7S6 290 aa10.5□□□□□ -0.73
CUX1-210ENST00000497815 POMGNT2Q8NAT1 580 aa10.5□□□□□ -0.73
CUX1-210ENST00000497815 OR2T33Q8NG76 320 aa10.5□□□□□ -0.73
CUX1-210ENST00000497815 OR4Q3Q8NH05 313 aa10.5□□□□□ -0.73
CUX1-210ENST00000497815 ZNF519Q8TB69 540 aa10.5□□□□□ -0.73
CUX1-210ENST00000497815 SLC29A1Q99808 456 aa10.5□□□□□ -0.73
CUX1-210ENST00000497815 ULBP2Q9BZM5 246 aa10.5□□□□□ -0.73
CUX1-210ENST00000497815 ASB6Q9NWX5 421 aa10.5□□□□□ -0.73
CUX1-210ENST00000497815 ORC6Q9Y5N6 252 aa10.5□□□□□ -0.73
CUX1-210ENST00000497815 RP1L1Q8IWN7 2480 aaPredicted RBP10.49□□□□□ -0.73
CUX1-210ENST00000497815 OR6C65A6NJZ3 312 aa10.49□□□□□ -0.73
CUX1-210ENST00000497815 BHLHE40O14503 412 aa10.49□□□□□ -0.73
CUX1-210ENST00000497815 IMPA2O14732 288 aa10.49□□□□□ -0.73
CUX1-210ENST00000497815 LYZL6O75951 148 aa10.49□□□□□ -0.73
CUX1-210ENST00000497815 ALPLP05186 524 aa10.49□□□□□ -0.73
CUX1-210ENST00000497815 QDPRP09417 244 aa10.49□□□□□ -0.73
CUX1-210ENST00000497815 HIST1H1CP16403 213 aaKnown RBP10.49□□□□□ -0.73
CUX1-210ENST00000497815 IGHV1-2P23083 117 aa10.49□□□□□ -0.73
CUX1-210ENST00000497815 CD79BP40259 229 aa10.49□□□□□ -0.73
CUX1-210ENST00000497815 ALDH3A2P51648 485 aa10.49□□□□□ -0.73
CUX1-210ENST00000497815 CRISP1P54107 249 aa10.49□□□□□ -0.73
CUX1-210ENST00000497815 SLC34A1Q06495 639 aa10.49□□□□□ -0.73
CUX1-210ENST00000497815 SNTB1Q13884 538 aaKnown RBP10.49□□□□□ -0.73
CUX1-210ENST00000497815 GINS1Q14691 196 aa10.49□□□□□ -0.73
CUX1-210ENST00000497815 PGGHGQ32M88 737 aa10.49□□□□□ -0.73
CUX1-210ENST00000497815 ZIK1Q3SY52 487 aaPredicted RBP10.49□□□□□ -0.73
CUX1-210ENST00000497815 FAM205BPQ63HN1 556 aa10.49□□□□□ -0.73
CUX1-210ENST00000497815 SLC27A4Q6P1M0 643 aa10.49□□□□□ -0.73
CUX1-210ENST00000497815 JAZF1Q86VZ6 243 aa10.49□□□□□ -0.73
CUX1-210ENST00000497815 GABRG1Q8N1C3 465 aa10.49□□□□□ -0.73
CUX1-210ENST00000497815 PARP8Q8N3A8 854 aa10.49□□□□□ -0.73
CUX1-210ENST00000497815 OR52E2Q8NGJ4 325 aa10.49□□□□□ -0.73
CUX1-210ENST00000497815 OR4K13Q8NH42 304 aa10.49□□□□□ -0.73
CUX1-210ENST00000497815 RNASE6Q93091 150 aaKnown RBP10.49□□□□□ -0.73
CUX1-210ENST00000497815 TMEM54Q969K7 222 aa10.49□□□□□ -0.73
CUX1-210ENST00000497815 LRRC46Q96FV0 321 aa10.49□□□□□ -0.73
CUX1-210ENST00000497815 MRPL13Q9BYD1 178 aaKnown RBP10.49□□□□□ -0.73
CUX1-210ENST00000497815 LINC00470Q9BZP3 86 aa10.49□□□□□ -0.73
CUX1-210ENST00000497815 RERGLQ9H628 205 aa10.49□□□□□ -0.73
CUX1-210ENST00000497815 RNPEPL1Q9HAU8 725 aa10.49□□□□□ -0.73
CUX1-210ENST00000497815 CRLF2Q9HC73 371 aa10.49□□□□□ -0.73
CUX1-210ENST00000497815 B3GAT2Q9NPZ5 323 aa10.49□□□□□ -0.73
CUX1-210ENST00000497815 USE1Q9NZ43 259 aa10.49□□□□□ -0.73
CUX1-210ENST00000497815 GLTPQ9NZD2 209 aa10.49□□□□□ -0.73
CUX1-210ENST00000497815 MALT1Q9UDY8 824 aa10.49□□□□□ -0.73
CUX1-210ENST00000497815 FOXD3Q9UJU5 478 aaPredicted RBP10.49□□□□□ -0.73
CUX1-210ENST00000497815 BOLA1Q9Y3E2 137 aa10.49□□□□□ -0.73
CUX1-210ENST00000497815 MYO7BQ6PIF6 2116 aa10.48□□□□□ -0.73
CUX1-210ENST00000497815 CIB4A0PJX0 185 aa10.48□□□□□ -0.73
CUX1-210ENST00000497815 PRSS44E7EML9 344 aa10.48□□□□□ -0.73
CUX1-210ENST00000497815 C19orf84I3L1E1 186 aa10.48□□□□□ -0.73
CUX1-210ENST00000497815 ARPC3O15145 178 aa10.48□□□□□ -0.73
CUX1-210ENST00000497815 MGRN1O60291 552 aa10.48□□□□□ -0.73
CUX1-210ENST00000497815 RAD51DO75771 328 aa10.48□□□□□ -0.73
CUX1-210ENST00000497815 SEC14L2O76054 403 aa10.48□□□□□ -0.73
CUX1-210ENST00000497815 SLC2A10O95528 541 aa10.48□□□□□ -0.73
CUX1-210ENST00000497815 CNOT4O95628 575 aaKnown RBP10.48□□□□□ -0.73
CUX1-210ENST00000497815 ATP6V1G2O95670 118 aa10.48□□□□□ -0.73
CUX1-210ENST00000497815 TXNDC12O95881 172 aa10.48□□□□□ -0.73
CUX1-210ENST00000497815 APEHP13798 732 aaKnown RBP10.48□□□□□ -0.73
CUX1-210ENST00000497815 EPHA2P29317 976 aa10.48□□□□□ -0.73
CUX1-210ENST00000497815 POLR2IP36954 125 aaKnown RBP10.48□□□□□ -0.73
CUX1-210ENST00000497815 CDKN2AP42771 156 aaKnown RBP10.48□□□□□ -0.73
CUX1-210ENST00000497815 ESRRGP62508 458 aa10.48□□□□□ -0.73
CUX1-210ENST00000497815 TFF3Q07654 80 aa10.48□□□□□ -0.73
CUX1-210ENST00000497815 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.48□□□□□ -0.73
CUX1-210ENST00000497815 DBPQ10586 325 aaPredicted RBP10.48□□□□□ -0.73
CUX1-210ENST00000497815 P2RY6Q15077 328 aa10.48□□□□□ -0.73
CUX1-210ENST00000497815 PTGES3Q15185 160 aaKnown RBP10.48□□□□□ -0.73
CUX1-210ENST00000497815 CEACAM16Q2WEN9 425 aa10.48□□□□□ -0.73
CUX1-210ENST00000497815 ACSM5Q6NUN0 579 aa10.48□□□□□ -0.73
CUX1-210ENST00000497815 LEG1Q6P5S2 330 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms